RNA–Protein interactions for RNA: ENST00000440179.5

SMC2-204, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 3

Gene SMC2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-204ENST00000440179 IPO8O15397 1037 aaKnown RBP16.42■□□□□ 0.22
SMC2-204ENST00000440179 CCDC144BQ3MJ40 725 aa16.42■□□□□ 0.22
SMC2-204ENST00000440179 GNASQ5JWF2 1037 aa16.42■□□□□ 0.22
SMC2-204ENST00000440179 PPP2R2DQ66LE6 453 aa16.42■□□□□ 0.22
SMC2-204ENST00000440179 ZNF467Q7Z7K2 595 aaPredicted RBP16.42■□□□□ 0.22
SMC2-204ENST00000440179 TMEM57Q8N5G2 664 aa16.42■□□□□ 0.22
SMC2-204ENST00000440179 SLC43A3Q8NBI5 491 aa16.42■□□□□ 0.22
SMC2-204ENST00000440179 CCDC17Q96LX7 622 aa16.42■□□□□ 0.22
SMC2-204ENST00000440179 TEX13BQ9BXU2 312 aa16.42■□□□□ 0.22
SMC2-204ENST00000440179 MTIF3Q9H2K0 278 aaKnown RBP16.42■□□□□ 0.22
SMC2-204ENST00000440179 HCN4Q9Y3Q4 1203 aa16.42■□□□□ 0.22
SMC2-204ENST00000440179 ZNF532Q9HCE3 1301 aa16.42■□□□□ 0.22
SMC2-204ENST00000440179 BAZ2AQ9UIF9 1905 aaKnown RBP16.41■□□□□ 0.22
SMC2-204ENST00000440179 CYP2D7A0A087X1C5 515 aa16.41■□□□□ 0.22
SMC2-204ENST00000440179 TLR3O15455 904 aaKnown RBP16.41■□□□□ 0.22
SMC2-204ENST00000440179 PRKAB2O43741 272 aa16.41■□□□□ 0.22
SMC2-204ENST00000440179 CDK8P49336 464 aa16.41■□□□□ 0.22
SMC2-204ENST00000440179 NKX3-2P78367 333 aa16.41■□□□□ 0.22
SMC2-204ENST00000440179 AAK1Q2M2I8 961 aa16.41■□□□□ 0.22
SMC2-204ENST00000440179 SNRNP48Q6IEG0 339 aaKnown RBP16.41■□□□□ 0.22
SMC2-204ENST00000440179 DDX11Q96FC9 970 aa16.41■□□□□ 0.22
SMC2-204ENST00000440179 PHF12Q96QT6 1004 aa16.41■□□□□ 0.22
SMC2-204ENST00000440179 KATNBL1Q9H079 304 aa16.41■□□□□ 0.22
SMC2-204ENST00000440179 WNT8AQ9H1J5 351 aa16.41■□□□□ 0.22
SMC2-204ENST00000440179 HIPK3Q9H422 1215 aa16.41■□□□□ 0.22
SMC2-204ENST00000440179 WDFY4Q6ZS81 3184 aa16.4■□□□□ 0.22
SMC2-204ENST00000440179 AACSQ86V21 672 aa16.4■□□□□ 0.22
SMC2-204ENST00000440179 FRAT1Q92837 279 aaPredicted RBP16.4■□□□□ 0.22
SMC2-204ENST00000440179 NUP88Q99567 741 aaPredicted RBP16.4■□□□□ 0.22
SMC2-204ENST00000440179 NOC4LQ9BVI4 516 aaKnown RBP16.4■□□□□ 0.22
SMC2-204ENST00000440179 ABHD16BQ9H3Z7 469 aa16.4■□□□□ 0.22
SMC2-204ENST00000440179 ARMT1Q9H993 441 aa16.4■□□□□ 0.22
SMC2-204ENST00000440179 SPC25Q9HBM1 224 aa16.4■□□□□ 0.22
SMC2-204ENST00000440179 C11orf16Q9NQ32 467 aa16.4■□□□□ 0.22
SMC2-204ENST00000440179 PCDHA11Q9Y5I1 949 aa16.4■□□□□ 0.22
SMC2-204ENST00000440179 MTCH2Q9Y6C9 303 aa16.4■□□□□ 0.22
SMC2-204ENST00000440179 ASTN1O14525 1302 aa16.4■□□□□ 0.22
SMC2-204ENST00000440179 RFXAPO00287 272 aa16.39■□□□□ 0.21
SMC2-204ENST00000440179 POU3F3P20264 500 aaPredicted RBP16.39■□□□□ 0.21
SMC2-204ENST00000440179 CCL23P55773 120 aa16.39■□□□□ 0.21
SMC2-204ENST00000440179 BEX3Q00994 111 aa16.39■□□□□ 0.21
SMC2-204ENST00000440179 TTF1Q15361 905 aaPredicted RBP16.39■□□□□ 0.21
SMC2-204ENST00000440179 TMEM31Q5JXX7 168 aa16.39■□□□□ 0.21
SMC2-204ENST00000440179 C12orf60Q5U649 245 aa16.39■□□□□ 0.21
SMC2-204ENST00000440179 CXCL17Q6UXB2 119 aa16.39■□□□□ 0.21
SMC2-204ENST00000440179 C16orf86Q6ZW13 317 aa16.39■□□□□ 0.21
SMC2-204ENST00000440179 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.39■□□□□ 0.21
SMC2-204ENST00000440179 ARMCX2Q7L311 632 aa16.39■□□□□ 0.21
SMC2-204ENST00000440179 RASEFQ8IZ41 740 aa16.39■□□□□ 0.21
SMC2-204ENST00000440179 KHSRPQ92945 711 aaKnown RBP eCLIP16.39■□□□□ 0.21
SMC2-204ENST00000440179 SLF1Q9BQI6 1058 aa16.39■□□□□ 0.21
SMC2-204ENST00000440179 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.39■□□□□ 0.21
SMC2-204ENST00000440179 KANSL2Q9H9L4 492 aa16.39■□□□□ 0.21
SMC2-204ENST00000440179 GOPCQ9HD26 462 aa16.39■□□□□ 0.21
SMC2-204ENST00000440179 SLC4A7Q9Y6M7 1214 aa16.39■□□□□ 0.21
SMC2-204ENST00000440179 GRIN2DO15399 1336 aa16.39■□□□□ 0.21
SMC2-204ENST00000440179 EPOPA6NHQ4 379 aa16.38■□□□□ 0.21
SMC2-204ENST00000440179 TLL1O43897 1013 aa16.38■□□□□ 0.21
SMC2-204ENST00000440179 RAD21O60216 631 aa16.38■□□□□ 0.21
SMC2-204ENST00000440179 SKIV2LQ15477 1246 aaKnown RBP16.38■□□□□ 0.21
SMC2-204ENST00000440179 SLFNL1Q499Z3 407 aa16.38■□□□□ 0.21
SMC2-204ENST00000440179 LRRC37A2A6NM11 1700 aa16.38■□□□□ 0.21
SMC2-204ENST00000440179 GREB1LQ9C091 1923 aaPredicted RBP16.37■□□□□ 0.21
SMC2-204ENST00000440179 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.37■□□□□ 0.21
SMC2-204ENST00000440179 ATP2A1O14983 1001 aa16.37■□□□□ 0.21
SMC2-204ENST00000440179 MBD4O95243 580 aa16.37■□□□□ 0.21
SMC2-204ENST00000440179 KRT40Q6A162 431 aa16.37■□□□□ 0.21
SMC2-204ENST00000440179 TRPV6Q9H1D0 765 aa16.37■□□□□ 0.21
SMC2-204ENST00000440179 ATP8A2Q9NTI2 1148 aa16.37■□□□□ 0.21
SMC2-204ENST00000440179 USP17L12C9JPN9 530 aa16.36■□□□□ 0.21
SMC2-204ENST00000440179 USP17L21D6R901 530 aa16.36■□□□□ 0.21
SMC2-204ENST00000440179 GOLIM4O00461 696 aa16.36■□□□□ 0.21
SMC2-204ENST00000440179 ATP2A2P16615 1042 aaKnown RBP16.36■□□□□ 0.21
SMC2-204ENST00000440179 PTGS1P23219 599 aa16.36■□□□□ 0.21
SMC2-204ENST00000440179 ITGA7Q13683 1181 aa16.36■□□□□ 0.21
SMC2-204ENST00000440179 TTLL4Q14679 1199 aa16.36■□□□□ 0.21
SMC2-204ENST00000440179 CCDC144CPQ8IYA2 1237 aa16.36■□□□□ 0.21
SMC2-204ENST00000440179 EXOC6BQ9Y2D4 811 aa16.36■□□□□ 0.21
SMC2-204ENST00000440179 B4GALT4O60513 344 aa16.35■□□□□ 0.21
SMC2-204ENST00000440179 GPR37L1O60883 481 aa16.35■□□□□ 0.21
SMC2-204ENST00000440179 ARHGEF15O94989 841 aa16.35■□□□□ 0.21
SMC2-204ENST00000440179 CA3P07451 260 aa16.35■□□□□ 0.21
SMC2-204ENST00000440179 SLC4A3P48751 1232 aa16.35■□□□□ 0.21
SMC2-204ENST00000440179 NUBP1P53384 320 aa16.35■□□□□ 0.21
SMC2-204ENST00000440179 CPXCR1Q8N123 301 aa16.35■□□□□ 0.21
SMC2-204ENST00000440179 SCLYQ96I15 445 aa16.35■□□□□ 0.21
SMC2-204ENST00000440179 AGBL1Q96MI9 1066 aa16.35■□□□□ 0.21
SMC2-204ENST00000440179 DNAJC2Q99543 621 aaKnown RBP16.35■□□□□ 0.21
SMC2-204ENST00000440179 CERS4Q9HA82 394 aa16.35■□□□□ 0.21
SMC2-204ENST00000440179 RAVER2Q9HCJ3 691 aaKnown RBP16.35■□□□□ 0.21
SMC2-204ENST00000440179 COG5Q9UP83 839 aa16.35■□□□□ 0.21
SMC2-204ENST00000440179 GNEQ9Y223 722 aaKnown RBP16.35■□□□□ 0.21
SMC2-204ENST00000440179 FAM86C2PA6NEL3 165 aa16.34■□□□□ 0.21
SMC2-204ENST00000440179 ZBBXA8MT70 800 aa16.34■□□□□ 0.21
SMC2-204ENST00000440179 CABYRO75952 493 aa16.34■□□□□ 0.21
SMC2-204ENST00000440179 NDUFB10O96000 172 aa16.34■□□□□ 0.21
SMC2-204ENST00000440179 CHGBP05060 677 aa16.34■□□□□ 0.21
SMC2-204ENST00000440179 CNTN2Q02246 1040 aa16.34■□□□□ 0.21
SMC2-204ENST00000440179 TNFAIP2Q03169 654 aa16.34■□□□□ 0.21
SMC2-204ENST00000440179 FSCN1Q16658 493 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms