RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 MAML3Q96JK9 1138 aa27.73■■■□□ 2.03
VARS-217ENST00000440048 AGBL1Q96MI9 1066 aa27.73■■■□□ 2.03
VARS-217ENST00000440048 ANO2Q9NQ90 1003 aa27.73■■■□□ 2.03
VARS-217ENST00000440048 SMCHD1A6NHR9 2005 aa27.72■■■□□ 2.03
VARS-217ENST00000440048 SEC23AQ15436 765 aa27.72■■■□□ 2.03
VARS-217ENST00000440048 ZNF792Q3KQV3 632 aa27.72■■■□□ 2.03
VARS-217ENST00000440048 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.72■■■□□ 2.034e-6■□□□□ 11
VARS-217ENST00000440048 CHST13Q8NET6 341 aa27.72■■■□□ 2.03
VARS-217ENST00000440048 NCOA7Q8NI08 942 aa27.72■■■□□ 2.03
VARS-217ENST00000440048 IFIT1BQ5T764 474 aaKnown RBP27.71■■■□□ 2.03
VARS-217ENST00000440048 CASC1Q6TDU7 716 aa27.71■■■□□ 2.03
VARS-217ENST00000440048 RALYLQ86SE5 291 aaKnown RBP27.71■■■□□ 2.03
VARS-217ENST00000440048 RANBP17Q9H2T7 1088 aaKnown RBP27.71■■■□□ 2.03
VARS-217ENST00000440048 HOMER2Q9NSB8 354 aa27.71■■■□□ 2.03
VARS-217ENST00000440048 FBXO40Q9UH90 709 aa27.71■■■□□ 2.03
VARS-217ENST00000440048 DIS3Q9Y2L1 958 aaKnown RBP27.71■■■□□ 2.03
VARS-217ENST00000440048 GOLGA8HP0CJ92 632 aa27.7■■■□□ 2.02
VARS-217ENST00000440048 GPATCH4Q5T3I0 446 aaKnown RBP27.7■■■□□ 2.02
VARS-217ENST00000440048 UBE2Q1Q7Z7E8 422 aa27.7■■■□□ 2.02
VARS-217ENST00000440048 DDX11Q96FC9 970 aa27.7■■■□□ 2.02
VARS-217ENST00000440048 SLC27A2O14975 620 aa27.69■■■□□ 2.02
VARS-217ENST00000440048 NECTIN1Q15223 517 aa27.69■■■□□ 2.02
VARS-217ENST00000440048 TKFCQ3LXA3 575 aa27.69■■■□□ 2.02
VARS-217ENST00000440048 TRPV1Q8NER1 839 aa27.69■■■□□ 2.02
VARS-217ENST00000440048 RNF146Q9NTX7 359 aa27.69■■■□□ 2.02
VARS-217ENST00000440048 DNAJC25-GNG10A0A024R161 153 aa27.68■■■□□ 2.02
VARS-217ENST00000440048 FARP2O94887 1054 aaPredicted RBP27.68■■■□□ 2.02
VARS-217ENST00000440048 ALAS1P13196 640 aa27.68■■■□□ 2.02
VARS-217ENST00000440048 CREB3L3Q68CJ9 461 aa27.68■■■□□ 2.02
VARS-217ENST00000440048 MB21D2Q8IYB1 491 aaPredicted RBP27.68■■■□□ 2.02
VARS-217ENST00000440048 ANKRD35Q8N283 1001 aa27.68■■■□□ 2.02
VARS-217ENST00000440048 ACAD9Q9H845 621 aa27.68■■■□□ 2.02
VARS-217ENST00000440048 CCPG1Q9ULG6 757 aa27.68■■■□□ 2.02
VARS-217ENST00000440048 IFIT3O14879 490 aaKnown RBP27.67■■■□□ 2.02
VARS-217ENST00000440048 ICAM1P05362 532 aa27.67■■■□□ 2.02
VARS-217ENST00000440048 CYBAP13498 195 aa27.67■■■□□ 2.02
VARS-217ENST00000440048 CHST3Q7LGC8 479 aa27.67■■■□□ 2.02
VARS-217ENST00000440048 TRERF1Q96PN7 1200 aa27.67■■■□□ 2.02
VARS-217ENST00000440048 OGDHLQ9ULD0 1010 aa27.67■■■□□ 2.02
VARS-217ENST00000440048 TAL1P17542 331 aaPredicted RBP27.66■■■□□ 2.02
VARS-217ENST00000440048 CNGA1P29973 690 aa27.66■■■□□ 2.02
VARS-217ENST00000440048 ANTXR2P58335 489 aa27.66■■■□□ 2.02
VARS-217ENST00000440048 ASPRV1Q53RT3 343 aa27.66■■■□□ 2.02
VARS-217ENST00000440048 LHX8Q68G74 356 aa27.66■■■□□ 2.02
VARS-217ENST00000440048 TINF2Q9BSI4 451 aa27.66■■■□□ 2.02
VARS-217ENST00000440048 UBA5Q9GZZ9 404 aa27.66■■■□□ 2.02
VARS-217ENST00000440048 CPVLQ9H3G5 476 aa27.66■■■□□ 2.02
VARS-217ENST00000440048 FRMPD3Q5JV73 1810 aa27.66■■■□□ 2.02
VARS-217ENST00000440048 PRAMEF19Q5SWL8 479 aa27.65■■■□□ 2.02
VARS-217ENST00000440048 SENP2Q9HC62 589 aa27.65■■■□□ 2.02
VARS-217ENST00000440048 ERICH2A1L162 156 aa27.64■■■□□ 2.02
VARS-217ENST00000440048 PARP1P09874 1014 aaKnown RBP27.64■■■□□ 2.02
VARS-217ENST00000440048 WTAPQ15007 396 aa27.64■■■□□ 2.02
VARS-217ENST00000440048 SART3Q15020 963 aaKnown RBP27.64■■■□□ 2.02
VARS-217ENST00000440048 MUM1L1Q5H9M0 696 aa27.64■■■□□ 2.02
VARS-217ENST00000440048 ANKLE1Q8NAG6 615 aa27.64■■■□□ 2.02
VARS-217ENST00000440048 A1CFQ9NQ94 594 aaKnown RBP27.64■■■□□ 2.02
VARS-217ENST00000440048 DDX20Q9UHI6 824 aaKnown RBP27.64■■■□□ 2.02
VARS-217ENST00000440048 HTATIP2Q9BUP3 242 aa27.63■■■□□ 2.01
VARS-217ENST00000440048 MCM3APO60318 1980 aa27.62■■■□□ 2.01
VARS-217ENST00000440048 MNX1P50219 401 aaPredicted RBP27.62■■■□□ 2.01
VARS-217ENST00000440048 TMEM67Q5HYA8 995 aa27.62■■■□□ 2.01
VARS-217ENST00000440048 IGDCC4Q8TDY8 1250 aa27.62■■■□□ 2.01
VARS-217ENST00000440048 DIS3LQ8TF46 1054 aaKnown RBP27.62■■■□□ 2.01
VARS-217ENST00000440048 FGD4Q96M96 766 aa27.62■■■□□ 2.01
VARS-217ENST00000440048 MSCO60682 206 aa27.61■■■□□ 2.01
VARS-217ENST00000440048 ZNF467Q7Z7K2 595 aaPredicted RBP27.61■■■□□ 2.01
VARS-217ENST00000440048 ADGRF4Q8IZF3 695 aa27.61■■■□□ 2.01
VARS-217ENST00000440048 STAG2Q8N3U4 1231 aa27.61■■■□□ 2.01
VARS-217ENST00000440048 MSL3Q8N5Y2 521 aaKnown RBP27.61■■■□□ 2.01
VARS-217ENST00000440048 PAWRQ96IZ0 340 aaKnown RBP27.61■■■□□ 2.01
VARS-217ENST00000440048 NRBP1Q9UHY1 535 aa27.61■■■□□ 2.01
VARS-217ENST00000440048 PNMA2Q9UL42 364 aa27.61■■■□□ 2.01
VARS-217ENST00000440048 PFASO15067 1338 aa27.61■■■□□ 2.01
VARS-217ENST00000440048 MYH6P13533 1939 aa27.61■■■□□ 2.01
VARS-217ENST00000440048 POTEB2H3BUK9 544 aa27.6■■■□□ 2.01
VARS-217ENST00000440048 SEPT4O43236 478 aa27.6■■■□□ 2.01
VARS-217ENST00000440048 CNTN2Q02246 1040 aa27.6■■■□□ 2.01
VARS-217ENST00000440048 COL9A3Q14050 684 aaPredicted RBP27.6■■■□□ 2.01
VARS-217ENST00000440048 RNF20Q5VTR2 975 aa27.6■■■□□ 2.01
VARS-217ENST00000440048 MAMDC4Q6UXC1 1216 aa27.6■■■□□ 2.01
VARS-217ENST00000440048 FAM133AQ8N9E0 248 aa27.6■■■□□ 2.01
VARS-217ENST00000440048 WDR19Q8NEZ3 1342 aa27.6■■■□□ 2.01
VARS-217ENST00000440048 PRC1O43663 620 aa27.59■■■□□ 2.01
VARS-217ENST00000440048 MCM5P33992 734 aa27.59■■■□□ 2.01
VARS-217ENST00000440048 GPHNQ9NQX3 736 aaPredicted RBP27.59■■■□□ 2.01
VARS-217ENST00000440048 CYP39A1Q9NYL5 469 aa27.59■■■□□ 2.01
VARS-217ENST00000440048 MAD2L2Q9UI95 211 aa27.59■■■□□ 2.01
VARS-217ENST00000440048 SYNGAP1Q96PV0 1343 aa27.59■■■□□ 2.01
VARS-217ENST00000440048 PALM3A6NDB9 673 aaPredicted RBP27.58■■■□□ 2.01
VARS-217ENST00000440048 SNAI1O95863 264 aaPredicted RBP27.58■■■□□ 2.01
VARS-217ENST00000440048 GRM4Q14833 912 aa27.58■■■□□ 2.01
VARS-217ENST00000440048 CDC37Q16543 378 aaPredicted RBP27.58■■■□□ 2.01
VARS-217ENST00000440048 NSMFQ6X4W1 530 aa27.58■■■□□ 2.01
VARS-217ENST00000440048 NECAB2Q7Z6G3 386 aa27.58■■■□□ 2.01
VARS-217ENST00000440048 CLEC4DQ8WXI8 215 aa27.58■■■□□ 2.01
VARS-217ENST00000440048 DPF3Q92784 378 aa27.58■■■□□ 2.01
VARS-217ENST00000440048 MTA3Q9BTC8 594 aa27.58■■■□□ 2.01
VARS-217ENST00000440048 LY9Q9HBG7 655 aa27.58■■■□□ 2.01
VARS-217ENST00000440048 LCTP09848 1927 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms