RNA–Protein interactions for RNA: ENST00000439406.5

HCG20-208, Transcript of HLA complex group 20, humanhuman

TSL 2 BASIC

Gene HCG20, Length 1,202 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG20-208ENST00000439406 PPP4R4Q6NUP7 873 aa9.03□□□□□ -0.96
HCG20-208ENST00000439406 LAPTM4BQ86VI4 370 aa9.03□□□□□ -0.96
HCG20-208ENST00000439406 JAMLQ86YT9 394 aa9.03□□□□□ -0.96
HCG20-208ENST00000439406 ETFBKMTQ8IXQ9 262 aa9.03□□□□□ -0.96
HCG20-208ENST00000439406 SAMD3Q8N6K7 520 aa9.03□□□□□ -0.96
HCG20-208ENST00000439406 GPATCH11Q8N954 259 aa9.03□□□□□ -0.96
HCG20-208ENST00000439406 CCDC74AQ96AQ1 378 aa9.03□□□□□ -0.96
HCG20-208ENST00000439406 OPTNQ96CV9 577 aa9.03□□□□□ -0.96
HCG20-208ENST00000439406 ANKRD2Q9GZV1 360 aa9.03□□□□□ -0.96
HCG20-208ENST00000439406 COL4A1P02462 1669 aa9.02□□□□□ -0.97
HCG20-208ENST00000439406 CCL15-CCL14A0A0B4J2E2 113 aa9.02□□□□□ -0.97
HCG20-208ENST00000439406 ALG1L2C9J202 215 aa9.02□□□□□ -0.97
HCG20-208ENST00000439406 PDPK1O15530 556 aa9.02□□□□□ -0.97
HCG20-208ENST00000439406 TSPAN6O43657 245 aa9.02□□□□□ -0.97
HCG20-208ENST00000439406 HSP90AA1P07900 732 aaKnown RBP9.02□□□□□ -0.97
HCG20-208ENST00000439406 BMP8BP34820 402 aa9.02□□□□□ -0.97
HCG20-208ENST00000439406 EIF4A3P38919 411 aaKnown RBP9.02□□□□□ -0.97
HCG20-208ENST00000439406 MMP16P51512 607 aa9.02□□□□□ -0.97
HCG20-208ENST00000439406 HNRNPUQ00839 825 aaKnown RBP eCLIP9.02□□□□□ -0.97
HCG20-208ENST00000439406 FOXK2Q01167 660 aa9.02□□□□□ -0.97
HCG20-208ENST00000439406 TNFAIP1Q13829 316 aa9.02□□□□□ -0.97
HCG20-208ENST00000439406 RASGRF1Q13972 1273 aa9.02□□□□□ -0.97
HCG20-208ENST00000439406 NFE2Q16621 373 aaPredicted RBP9.02□□□□□ -0.97
HCG20-208ENST00000439406 CCL15Q16663 113 aa9.02□□□□□ -0.97
HCG20-208ENST00000439406 C11orf91Q3C1V1 193 aa9.02□□□□□ -0.97
HCG20-208ENST00000439406 TKFCQ3LXA3 575 aa9.02□□□□□ -0.97
HCG20-208ENST00000439406 L1TD1Q5T7N2 865 aaKnown RBP9.02□□□□□ -0.97
HCG20-208ENST00000439406 EPS8L3Q8TE67 593 aaKnown RBP9.02□□□□□ -0.97
HCG20-208ENST00000439406 BRI3BPQ8WY22 251 aa9.02□□□□□ -0.97
HCG20-208ENST00000439406 EAF1Q96JC9 268 aaPredicted RBP9.02□□□□□ -0.97
HCG20-208ENST00000439406 TRIM47Q96LD4 638 aa9.02□□□□□ -0.97
HCG20-208ENST00000439406 NAP1L4Q99733 375 aaKnown RBP9.02□□□□□ -0.97
HCG20-208ENST00000439406 CWC25Q9NXE8 425 aaPredicted RBP9.02□□□□□ -0.97
HCG20-208ENST00000439406 SFMBT1Q9UHJ3 866 aa9.02□□□□□ -0.97
HCG20-208ENST00000439406 STXBP5LQ9Y2K9 1186 aa9.02□□□□□ -0.97
HCG20-208ENST00000439406 ZNF646O15015 1829 aaPredicted RBP9.02□□□□□ -0.97
HCG20-208ENST00000439406 MINDY4BA8MYZ0 360 aa9.01□□□□□ -0.97
HCG20-208ENST00000439406 ALDH1L1O75891 902 aa9.01□□□□□ -0.97
HCG20-208ENST00000439406 MYL1P05976 194 aa9.01□□□□□ -0.97
HCG20-208ENST00000439406 CETPP11597 493 aa9.01□□□□□ -0.97
HCG20-208ENST00000439406 GRK4P32298 578 aa9.01□□□□□ -0.97
HCG20-208ENST00000439406 TMPOP42166 694 aaKnown RBP9.01□□□□□ -0.97
HCG20-208ENST00000439406 CALD1Q05682 793 aaKnown RBP9.01□□□□□ -0.97
HCG20-208ENST00000439406 MTFR1Q15390 333 aa9.01□□□□□ -0.97
HCG20-208ENST00000439406 TXNRD3Q86VQ6 643 aa9.01□□□□□ -0.97
HCG20-208ENST00000439406 TTLL11Q8NHH1 800 aa9.01□□□□□ -0.97
HCG20-208ENST00000439406 EMID1Q96A84 441 aaPredicted RBP9.01□□□□□ -0.97
HCG20-208ENST00000439406 SHISA4Q96DD7 197 aa9.01□□□□□ -0.97
HCG20-208ENST00000439406 PRMT6Q96LA8 375 aaPredicted RBP9.01□□□□□ -0.97
HCG20-208ENST00000439406 ELP3Q9H9T3 547 aa9.01□□□□□ -0.97
HCG20-208ENST00000439406 CD209Q9NNX6 404 aa9.01□□□□□ -0.97
HCG20-208ENST00000439406 SCHIP1Q9P0W5 487 aaPredicted RBP9.01□□□□□ -0.97
HCG20-208ENST00000439406 SRRDQ9UH36 339 aa9.01□□□□□ -0.97
HCG20-208ENST00000439406 SOX1O00570 391 aaPredicted RBP9□□□□□ -0.97
HCG20-208ENST00000439406 SMAD7O15105 426 aaKnown RBP9□□□□□ -0.97
HCG20-208ENST00000439406 STAU1O95793 577 aaKnown RBP9□□□□□ -0.97
HCG20-208ENST00000439406 GBP2P32456 591 aaPredicted RBP9□□□□□ -0.97
HCG20-208ENST00000439406 IGHMBP2P38935 993 aaKnown RBP9□□□□□ -0.97
HCG20-208ENST00000439406 CTSWP56202 376 aa9□□□□□ -0.97
HCG20-208ENST00000439406 UBXN2AP68543 259 aa9□□□□□ -0.97
HCG20-208ENST00000439406 HLTFQ14527 1009 aaKnown RBP eCLIP9□□□□□ -0.97
HCG20-208ENST00000439406 CFAP100Q494V2 611 aa9□□□□□ -0.97
HCG20-208ENST00000439406 C2orf27AQ580R0 203 aa9□□□□□ -0.97
HCG20-208ENST00000439406 PPP1R3FQ6ZSY5 799 aaPredicted RBP9□□□□□ -0.97
HCG20-208ENST00000439406 SYNPOQ8N3V7 929 aa9□□□□□ -0.97
HCG20-208ENST00000439406 RAET1EQ8TD07 263 aa9□□□□□ -0.97
HCG20-208ENST00000439406 GPR152Q8TDT2 470 aa9□□□□□ -0.97
HCG20-208ENST00000439406 IFT43Q96FT9 208 aa9□□□□□ -0.97
HCG20-208ENST00000439406 LRCH3Q96II8 777 aa9□□□□□ -0.97
HCG20-208ENST00000439406 MYD88Q99836 296 aa9□□□□□ -0.97
HCG20-208ENST00000439406 NT5C1AQ9BXI3 368 aa9□□□□□ -0.97
HCG20-208ENST00000439406 SRRTQ9BXP5 876 aaKnown RBP9□□□□□ -0.97
HCG20-208ENST00000439406 RNF208Q9H0X6 261 aa9□□□□□ -0.97
HCG20-208ENST00000439406 PLAAQ9Y263 795 aa9□□□□□ -0.97
HCG20-208ENST00000439406 CSADQ9Y600 493 aa9□□□□□ -0.97
HCG20-208ENST00000439406 SSC5DA1L4H1 1573 aa8.99□□□□□ -0.97
HCG20-208ENST00000439406 A6NJY4 79 aa8.99□□□□□ -0.97
HCG20-208ENST00000439406 SGPL1O95470 568 aa8.99□□□□□ -0.97
HCG20-208ENST00000439406 DDX58O95786 925 aaKnown RBP8.99□□□□□ -0.97
HCG20-208ENST00000439406 CCL5P13501 91 aa8.99□□□□□ -0.97
HCG20-208ENST00000439406 PMLP29590 882 aa8.99□□□□□ -0.97
HCG20-208ENST00000439406 IRS1P35568 1242 aa8.99□□□□□ -0.97
HCG20-208ENST00000439406 TTF1Q15361 905 aaPredicted RBP8.99□□□□□ -0.97
HCG20-208ENST00000439406 DDR2Q16832 855 aa8.99□□□□□ -0.97
HCG20-208ENST00000439406 KRT24Q2M2I5 525 aa8.99□□□□□ -0.97
HCG20-208ENST00000439406 LRIT3Q3SXY7 679 aa8.99□□□□□ -0.97
HCG20-208ENST00000439406 SYCP2LQ5T4T6 812 aa8.99□□□□□ -0.97
HCG20-208ENST00000439406 C17orf99Q6UX52 265 aa8.99□□□□□ -0.97
HCG20-208ENST00000439406 C15orf52Q6ZUT6 534 aaKnown RBP8.99□□□□□ -0.97
HCG20-208ENST00000439406 DEFB123Q8N688 67 aa8.99□□□□□ -0.97
HCG20-208ENST00000439406 THAP3Q8WTV1 239 aaPredicted RBP8.99□□□□□ -0.97
HCG20-208ENST00000439406 CHAC2Q8WUX2 184 aa8.99□□□□□ -0.97
HCG20-208ENST00000439406 SENP7Q9BQF6 1050 aa8.99□□□□□ -0.97
HCG20-208ENST00000439406 METTL22Q9BUU2 404 aaPredicted RBP8.99□□□□□ -0.97
HCG20-208ENST00000439406 COL25A1Q9BXS0 654 aaPredicted RBP8.99□□□□□ -0.97
HCG20-208ENST00000439406 SLC4A5Q9BY07 1137 aa8.99□□□□□ -0.97
HCG20-208ENST00000439406 ARHGAP39Q9C0H5 1083 aa8.99□□□□□ -0.97
HCG20-208ENST00000439406 RBSNQ9H1K0 784 aa8.99□□□□□ -0.97
HCG20-208ENST00000439406 VEZTQ9HBM0 779 aa8.99□□□□□ -0.97
HCG20-208ENST00000439406 ARNT2Q9HBZ2 717 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms