RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 ADAMTS5Q9UNA0 930 aa11.84□□□□□ -0.51
SMPD4-208ENST00000439029 TMX2Q9Y320 296 aa11.84□□□□□ -0.51
SMPD4-208ENST00000439029 DDX49Q9Y6V7 483 aaKnown RBP11.84□□□□□ -0.51
SMPD4-208ENST00000439029 TRANK1O15050 2925 aa11.83□□□□□ -0.51
SMPD4-208ENST00000439029 DCXO43602 365 aa11.83□□□□□ -0.52
SMPD4-208ENST00000439029 FAM83BQ5T0W9 1011 aa11.83□□□□□ -0.52
SMPD4-208ENST00000439029 SNRNP48Q6IEG0 339 aaKnown RBP11.83□□□□□ -0.52
SMPD4-208ENST00000439029 TMEM179Q6ZVK1 233 aa11.83□□□□□ -0.52
SMPD4-208ENST00000439029 ARMCX2Q7L311 632 aa11.83□□□□□ -0.52
SMPD4-208ENST00000439029 CPXCR1Q8N123 301 aa11.83□□□□□ -0.52
SMPD4-208ENST00000439029 MSL3Q8N5Y2 521 aaKnown RBP11.83□□□□□ -0.52
SMPD4-208ENST00000439029 FGD4Q96M96 766 aa11.83□□□□□ -0.52
SMPD4-208ENST00000439029 NUP88Q99567 741 aaPredicted RBP11.83□□□□□ -0.52
SMPD4-208ENST00000439029 PPP1R9AQ9ULJ8 1098 aa11.83□□□□□ -0.52
SMPD4-208ENST00000439029 HDAC5Q9UQL6 1122 aa11.83□□□□□ -0.52
SMPD4-208ENST00000439029 COL4A4P53420 1690 aaPredicted RBP11.83□□□□□ -0.52
SMPD4-208ENST00000439029 DNAJC25-GNG10A0A024R161 153 aa11.82□□□□□ -0.52
SMPD4-208ENST00000439029 PNMA6EA0A0J9YXQ4 647 aa11.82□□□□□ -0.52
SMPD4-208ENST00000439029 KIF28PB7ZC32 967 aa11.82□□□□□ -0.52
SMPD4-208ENST00000439029 H3BQ06 376 aaPredicted RBP11.82□□□□□ -0.52
SMPD4-208ENST00000439029 TNFAIP2Q03169 654 aa11.82□□□□□ -0.52
SMPD4-208ENST00000439029 LEXMQ3ZCV2 418 aa11.82□□□□□ -0.52
SMPD4-208ENST00000439029 TNNI3KQ59H18 835 aa11.82□□□□□ -0.52
SMPD4-208ENST00000439029 TMEM63BQ5T3F8 832 aa11.82□□□□□ -0.52
SMPD4-208ENST00000439029 SLC9A7Q96T83 725 aa11.82□□□□□ -0.52
SMPD4-208ENST00000439029 FTOQ9C0B1 505 aaKnown RBP eCLIP11.82□□□□□ -0.52
SMPD4-208ENST00000439029 ABHD16BQ9H3Z7 469 aa11.82□□□□□ -0.52
SMPD4-208ENST00000439029 ANTXR1Q9H6X2 564 aa11.82□□□□□ -0.52
SMPD4-208ENST00000439029 TLR7Q9NYK1 1049 aaKnown RBP11.82□□□□□ -0.52
SMPD4-208ENST00000439029 FPGT-TNNI3KV9GXZ4 949 aa11.82□□□□□ -0.52
SMPD4-208ENST00000439029 ZNF536O15090 1300 aa11.82□□□□□ -0.52
SMPD4-208ENST00000439029 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.81□□□□□ -0.52
SMPD4-208ENST00000439029 DYNC1LI2O43237 492 aaPredicted RBP11.81□□□□□ -0.52
SMPD4-208ENST00000439029 ACTN1P12814 892 aa11.81□□□□□ -0.52
SMPD4-208ENST00000439029 EEF2P13639 858 aaKnown RBP11.81□□□□□ -0.52
SMPD4-208ENST00000439029 FSCN1Q16658 493 aaKnown RBP11.81□□□□□ -0.52
SMPD4-208ENST00000439029 TLK2Q86UE8 772 aa11.81□□□□□ -0.52
SMPD4-208ENST00000439029 CCDC144CPQ8IYA2 1237 aa11.81□□□□□ -0.52
SMPD4-208ENST00000439029 PRSS33Q8NF86 280 aa11.81□□□□□ -0.52
SMPD4-208ENST00000439029 SDR42E1Q8WUS8 393 aa11.81□□□□□ -0.52
SMPD4-208ENST00000439029 RIOK1Q9BRS2 568 aaKnown RBP11.81□□□□□ -0.52
SMPD4-208ENST00000439029 KATNBL1Q9H079 304 aa11.81□□□□□ -0.52
SMPD4-208ENST00000439029 ALDH8A1Q9H2A2 487 aaPredicted RBP11.81□□□□□ -0.52
SMPD4-208ENST00000439029 PTPRZ1P23471 2315 aaPredicted RBP11.81□□□□□ -0.52
SMPD4-208ENST00000439029 WDFY4Q6ZS81 3184 aa11.8□□□□□ -0.52
SMPD4-208ENST00000439029 TET1Q8NFU7 2136 aa11.8□□□□□ -0.52
SMPD4-208ENST00000439029 CYP2D7A0A087X1C5 515 aa11.8□□□□□ -0.52
SMPD4-208ENST00000439029 POTEB3A0JP26 581 aa11.8□□□□□ -0.52
SMPD4-208ENST00000439029 GRXCR2A6NFK2 248 aa11.8□□□□□ -0.52
SMPD4-208ENST00000439029 ST18O60284 1047 aa11.8□□□□□ -0.52
SMPD4-208ENST00000439029 COPB2P35606 906 aa11.8□□□□□ -0.52
SMPD4-208ENST00000439029 CNTN2Q02246 1040 aa11.8□□□□□ -0.52
SMPD4-208ENST00000439029 OS9Q13438 667 aaPredicted RBP11.8□□□□□ -0.52
SMPD4-208ENST00000439029 POTEBQ6S5H4 581 aa11.8□□□□□ -0.52
SMPD4-208ENST00000439029 EP400NLQ6ZTU2 488 aa11.8□□□□□ -0.52
SMPD4-208ENST00000439029 ANKRD35Q8N283 1001 aa11.8□□□□□ -0.52
SMPD4-208ENST00000439029 TEX13BQ9BXU2 312 aa11.8□□□□□ -0.52
SMPD4-208ENST00000439029 AP5M1Q9H0R1 490 aa11.8□□□□□ -0.52
SMPD4-208ENST00000439029 CCDC8Q9H0W5 538 aaPredicted RBP11.8□□□□□ -0.52
SMPD4-208ENST00000439029 KCNH6Q9H252 994 aa11.8□□□□□ -0.52
SMPD4-208ENST00000439029 SH2D4AQ9H788 454 aa11.8□□□□□ -0.52
SMPD4-208ENST00000439029 SUGCTQ9HAC7 445 aa11.8□□□□□ -0.52
SMPD4-208ENST00000439029 RAVER2Q9HCJ3 691 aaKnown RBP11.8□□□□□ -0.52
SMPD4-208ENST00000439029 NAV1Q8NEY1 1877 aa11.8□□□□□ -0.52
SMPD4-208ENST00000439029 MAGEB6P1A0A0J9YX57 407 aa11.79□□□□□ -0.52
SMPD4-208ENST00000439029 CABYRO75952 493 aa11.79□□□□□ -0.52
SMPD4-208ENST00000439029 PFKMP08237 780 aa11.79□□□□□ -0.52
SMPD4-208ENST00000439029 SMPD1P17405 629 aa11.79□□□□□ -0.52
SMPD4-208ENST00000439029 MTX1Q13505 466 aa11.79□□□□□ -0.52
SMPD4-208ENST00000439029 IER5LQ5T953 404 aa11.79□□□□□ -0.52
SMPD4-208ENST00000439029 EEPD1Q7L9B9 569 aa11.79□□□□□ -0.52
SMPD4-208ENST00000439029 ZNF467Q7Z7K2 595 aaPredicted RBP11.79□□□□□ -0.52
SMPD4-208ENST00000439029 FAM9BQ8IZU0 186 aa11.79□□□□□ -0.52
SMPD4-208ENST00000439029 PHOSPHO2Q8TCD6 241 aa11.79□□□□□ -0.52
SMPD4-208ENST00000439029 SLF1Q9BQI6 1058 aa11.79□□□□□ -0.52
SMPD4-208ENST00000439029 ZBED2Q9BTP6 218 aa11.79□□□□□ -0.52
SMPD4-208ENST00000439029 PDGFCQ9NRA1 345 aa11.79□□□□□ -0.52
SMPD4-208ENST00000439029 HOMER2Q9NSB8 354 aa11.79□□□□□ -0.52
SMPD4-208ENST00000439029 FAM86C1Q9NVL1 165 aa11.79□□□□□ -0.52
SMPD4-208ENST00000439029 DBNLQ9UJU6 430 aaKnown RBP11.79□□□□□ -0.52
SMPD4-208ENST00000439029 GNEQ9Y223 722 aaKnown RBP11.79□□□□□ -0.52
SMPD4-208ENST00000439029 TNKSO95271 1327 aa11.79□□□□□ -0.52
SMPD4-208ENST00000439029 NKX3-2P78367 333 aa11.78□□□□□ -0.52
SMPD4-208ENST00000439029 ALDH1L2Q3SY69 923 aa11.78□□□□□ -0.52
SMPD4-208ENST00000439029 FAM47CQ5HY64 1035 aa11.78□□□□□ -0.52
SMPD4-208ENST00000439029 FAM117BQ6P1L5 589 aa11.78□□□□□ -0.52
SMPD4-208ENST00000439029 MFSD14AQ96MC6 490 aa11.78□□□□□ -0.52
SMPD4-208ENST00000439029 CRNKL1Q9BZJ0 848 aaKnown RBP11.78□□□□□ -0.52
SMPD4-208ENST00000439029 TECTAO75443 2155 aa11.77□□□□□ -0.53
SMPD4-208ENST00000439029 PRKAB2O43741 272 aa11.77□□□□□ -0.53
SMPD4-208ENST00000439029 ZEB2O60315 1214 aa11.77□□□□□ -0.53
SMPD4-208ENST00000439029 GNAI3P08754 354 aa11.77□□□□□ -0.53
SMPD4-208ENST00000439029 KCNJ6P48051 423 aa11.77□□□□□ -0.53
SMPD4-208ENST00000439029 DEFB103AP81534 67 aa11.77□□□□□ -0.53
SMPD4-208ENST00000439029 CERS3Q8IU89 383 aa11.77□□□□□ -0.53
SMPD4-208ENST00000439029 LCORLQ8N3X6 602 aa11.77□□□□□ -0.53
SMPD4-208ENST00000439029 KIFC2Q96AC6 838 aa11.77□□□□□ -0.53
SMPD4-208ENST00000439029 ZNF512BQ96KM6 892 aaPredicted RBP11.77□□□□□ -0.53
SMPD4-208ENST00000439029 API5Q9BZZ5 524 aaKnown RBP11.77□□□□□ -0.53
SMPD4-208ENST00000439029 GOPCQ9HD26 462 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms