RNA–Protein interactions for RNA: ENST00000438014.5

R3HDM1-208, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-208ENST00000438014 HOXC6P09630 235 aa10.24□□□□□ -0.77
R3HDM1-208ENST00000438014 SEC13P55735 322 aa10.24□□□□□ -0.77
R3HDM1-208ENST00000438014 CCDC102BQ68D86 513 aa10.24□□□□□ -0.77
R3HDM1-208ENST00000438014 ANKRD44Q8N8A2 993 aa10.24□□□□□ -0.77
R3HDM1-208ENST00000438014 KLHDC4Q8TBB5 520 aa10.24□□□□□ -0.77
R3HDM1-208ENST00000438014 GINM1Q9NU53 330 aa10.24□□□□□ -0.77
R3HDM1-208ENST00000438014 HERC5Q9UII4 1024 aaKnown RBP10.24□□□□□ -0.77
R3HDM1-208ENST00000438014 RABGAP1Q9Y3P9 1069 aa10.24□□□□□ -0.77
R3HDM1-208ENST00000438014 PCDHB11Q9Y5F2 797 aa10.24□□□□□ -0.77
R3HDM1-208ENST00000438014 RFX7Q2KHR2 1363 aa10.24□□□□□ -0.77
R3HDM1-208ENST00000438014 GPR75-ASB3A0A0A6YYF3 556 aa10.23□□□□□ -0.77
R3HDM1-208ENST00000438014 DKK1O94907 266 aa10.23□□□□□ -0.77
R3HDM1-208ENST00000438014 LDHCP07864 332 aa10.23□□□□□ -0.77
R3HDM1-208ENST00000438014 RAG1P15918 1043 aa10.23□□□□□ -0.77
R3HDM1-208ENST00000438014 TLE2Q04725 743 aa10.23□□□□□ -0.77
R3HDM1-208ENST00000438014 FPGSQ05932 587 aa10.23□□□□□ -0.77
R3HDM1-208ENST00000438014 ATP2B3Q16720 1220 aa10.23□□□□□ -0.77
R3HDM1-208ENST00000438014 WDR78Q5VTH9 848 aa10.23□□□□□ -0.77
R3HDM1-208ENST00000438014 FLRT1Q9NZU1 646 aa10.23□□□□□ -0.77
R3HDM1-208ENST00000438014 ABCF2Q9UG63 623 aa10.23□□□□□ -0.77
R3HDM1-208ENST00000438014 PTPRFP10586 1907 aa10.23□□□□□ -0.77
R3HDM1-208ENST00000438014 CACNA1AO00555 2505 aa10.23□□□□□ -0.77
R3HDM1-208ENST00000438014 DOCK1Q14185 1865 aa10.22□□□□□ -0.77
R3HDM1-208ENST00000438014 CLTBP09497 229 aa10.22□□□□□ -0.77
R3HDM1-208ENST00000438014 CYP2C19P33261 490 aa10.22□□□□□ -0.77
R3HDM1-208ENST00000438014 ADCYAP1R1P41586 468 aa10.22□□□□□ -0.77
R3HDM1-208ENST00000438014 GSTO1P78417 241 aa10.22□□□□□ -0.77
R3HDM1-208ENST00000438014 EXOSC9Q06265 439 aaKnown RBP10.22□□□□□ -0.77
R3HDM1-208ENST00000438014 AAK1Q2M2I8 961 aa10.22□□□□□ -0.77
R3HDM1-208ENST00000438014 CCDC174Q6PII3 467 aa10.22□□□□□ -0.77
R3HDM1-208ENST00000438014 TPCN2Q8NHX9 752 aa10.22□□□□□ -0.77
R3HDM1-208ENST00000438014 PI4KBQ9UBF8 816 aa10.22□□□□□ -0.77
R3HDM1-208ENST00000438014 MROH7-TTC4A0A0A0MT08 1334 aa10.22□□□□□ -0.77
R3HDM1-208ENST00000438014 PLXNB2O15031 1838 aa10.21□□□□□ -0.77
R3HDM1-208ENST00000438014 KIAA0355O15063 1070 aa10.21□□□□□ -0.77
R3HDM1-208ENST00000438014 SEPT4O43236 478 aa10.21□□□□□ -0.77
R3HDM1-208ENST00000438014 CYBAP13498 195 aa10.21□□□□□ -0.77
R3HDM1-208ENST00000438014 RBM25P49756 843 aaKnown RBP10.21□□□□□ -0.77
R3HDM1-208ENST00000438014 EPHB4P54760 987 aa10.21□□□□□ -0.77
R3HDM1-208ENST00000438014 RHBDL3P58872 404 aa10.21□□□□□ -0.77
R3HDM1-208ENST00000438014 RRP1BQ14684 758 aaKnown RBP10.21□□□□□ -0.77
R3HDM1-208ENST00000438014 OLFML2BQ68BL8 750 aa10.21□□□□□ -0.77
R3HDM1-208ENST00000438014 CCDC129Q6ZRS4 1044 aa10.21□□□□□ -0.77
R3HDM1-208ENST00000438014 DPP9Q86TI2 863 aa10.21□□□□□ -0.77
R3HDM1-208ENST00000438014 TRPV1Q8NER1 839 aa10.21□□□□□ -0.77
R3HDM1-208ENST00000438014 FERMT2Q96AC1 680 aa10.21□□□□□ -0.77
R3HDM1-208ENST00000438014 DHX36Q9H2U1 1008 aaKnown RBP10.21□□□□□ -0.77
R3HDM1-208ENST00000438014 SLC5A4Q9NY91 659 aa10.21□□□□□ -0.77
R3HDM1-208ENST00000438014 PCDHGA11Q9Y5H2 935 aa10.21□□□□□ -0.77
R3HDM1-208ENST00000438014 FANCIQ9NVI1 1328 aa10.21□□□□□ -0.78
R3HDM1-208ENST00000438014 PHIPQ8WWQ0 1821 aa10.21□□□□□ -0.78
R3HDM1-208ENST00000438014 STRNO43815 780 aa10.2□□□□□ -0.78
R3HDM1-208ENST00000438014 PRMT3O60678 531 aa10.2□□□□□ -0.78
R3HDM1-208ENST00000438014 CACNA1FO60840 1977 aa10.2□□□□□ -0.78
R3HDM1-208ENST00000438014 IGFBP4P22692 258 aa10.2□□□□□ -0.78
R3HDM1-208ENST00000438014 PHKA1P46020 1223 aa10.2□□□□□ -0.78
R3HDM1-208ENST00000438014 GRB14Q14449 540 aa10.2□□□□□ -0.78
R3HDM1-208ENST00000438014 LRRC41Q15345 812 aa10.2□□□□□ -0.78
R3HDM1-208ENST00000438014 CCDC85BQ15834 202 aaPredicted RBP10.2□□□□□ -0.78
R3HDM1-208ENST00000438014 PDS5AQ29RF7 1337 aaKnown RBP10.2□□□□□ -0.78
R3HDM1-208ENST00000438014 TMEM31Q5JXX7 168 aa10.2□□□□□ -0.78
R3HDM1-208ENST00000438014 FOXP4Q8IVH2 680 aaPredicted RBP10.2□□□□□ -0.78
R3HDM1-208ENST00000438014 C1orf216Q8TAB5 229 aa10.2□□□□□ -0.78
R3HDM1-208ENST00000438014 NPLOC4Q8TAT6 608 aa10.2□□□□□ -0.78
R3HDM1-208ENST00000438014 PRUNE2Q8WUY3 3088 aa10.2□□□□□ -0.78
R3HDM1-208ENST00000438014 DOCK2Q92608 1830 aa10.2□□□□□ -0.78
R3HDM1-208ENST00000438014 KCTD15Q96SI1 283 aaPredicted RBP10.2□□□□□ -0.78
R3HDM1-208ENST00000438014 LRFN3Q9BTN0 628 aa10.2□□□□□ -0.78
R3HDM1-208ENST00000438014 PRDM12Q9H4Q4 367 aa10.2□□□□□ -0.78
R3HDM1-208ENST00000438014 TMEM39AQ9NV64 488 aa10.2□□□□□ -0.78
R3HDM1-208ENST00000438014 CXXC1Q9P0U4 656 aaPredicted RBP10.2□□□□□ -0.78
R3HDM1-208ENST00000438014 LOC285556D6RIA3 1793 aa10.19□□□□□ -0.78
R3HDM1-208ENST00000438014 MAST2Q6P0Q8 1798 aa10.19□□□□□ -0.78
R3HDM1-208ENST00000438014 SFI1A8K8P3 1242 aa10.19□□□□□ -0.78
R3HDM1-208ENST00000438014 CIAO1O76071 339 aa10.19□□□□□ -0.78
R3HDM1-208ENST00000438014 BMP1P13497 986 aa10.19□□□□□ -0.78
R3HDM1-208ENST00000438014 ITGB8P26012 769 aa10.19□□□□□ -0.78
R3HDM1-208ENST00000438014 RFX5P48382 616 aaPredicted RBP10.19□□□□□ -0.78
R3HDM1-208ENST00000438014 RAB15P59190 212 aa10.19□□□□□ -0.78
R3HDM1-208ENST00000438014 MECOMQ03112 1051 aa10.19□□□□□ -0.78
R3HDM1-208ENST00000438014 KCNC4Q03721 635 aa10.19□□□□□ -0.78
R3HDM1-208ENST00000438014 DDX10Q13206 875 aaKnown RBP10.19□□□□□ -0.78
R3HDM1-208ENST00000438014 ATG9AQ7Z3C6 839 aa10.19□□□□□ -0.78
R3HDM1-208ENST00000438014 WDR63Q8IWG1 891 aa10.19□□□□□ -0.78
R3HDM1-208ENST00000438014 TOX2Q96NM4 488 aa10.19□□□□□ -0.78
R3HDM1-208ENST00000438014 NOL10Q9BSC4 688 aaKnown RBP10.19□□□□□ -0.78
R3HDM1-208ENST00000438014 MSRAQ9UJ68 235 aa10.19□□□□□ -0.78
R3HDM1-208ENST00000438014 PHF24Q9UPV7 400 aa10.19□□□□□ -0.78
R3HDM1-208ENST00000438014 NCOR1O75376 2440 aa10.18□□□□□ -0.78
R3HDM1-208ENST00000438014 DCDC2CA8MYV0 355 aa10.18□□□□□ -0.78
R3HDM1-208ENST00000438014 CNMDO75829 334 aa10.18□□□□□ -0.78
R3HDM1-208ENST00000438014 IGHA2P01877 340 aa10.18□□□□□ -0.78
R3HDM1-208ENST00000438014 VARSP26640 1264 aaKnown RBP10.18□□□□□ -0.78
R3HDM1-208ENST00000438014 SERPINB4P48594 390 aa10.18□□□□□ -0.78
R3HDM1-208ENST00000438014 USP14P54578 494 aa10.18□□□□□ -0.78
R3HDM1-208ENST00000438014 PPIGQ13427 754 aaKnown RBP eCLIP10.18□□□□□ -0.78
R3HDM1-208ENST00000438014 RAB30Q15771 203 aa10.18□□□□□ -0.78
R3HDM1-208ENST00000438014 ANO1Q5XXA6 986 aa10.18□□□□□ -0.78
R3HDM1-208ENST00000438014 CATSPERGQ6ZRH7 1159 aa10.18□□□□□ -0.78
R3HDM1-208ENST00000438014 RNF180Q86T96 592 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms