RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 NKX3-2P78367 333 aa17.1■□□□□ 0.33
TNFRSF1A-203ENST00000437813 TLE2Q04725 743 aa17.1■□□□□ 0.33
TNFRSF1A-203ENST00000437813 ZNF589Q86UQ0 364 aaPredicted RBP17.1■□□□□ 0.33
TNFRSF1A-203ENST00000437813 DEFB123Q8N688 67 aa17.1■□□□□ 0.33
TNFRSF1A-203ENST00000437813 STAG1Q8WVM7 1258 aa17.1■□□□□ 0.33
TNFRSF1A-203ENST00000437813 DDX11Q96FC9 970 aa17.1■□□□□ 0.33
TNFRSF1A-203ENST00000437813 TSEN34Q9BSV6 310 aaKnown RBP17.1■□□□□ 0.33
TNFRSF1A-203ENST00000437813 FBXO40Q9UH90 709 aa17.1■□□□□ 0.33
TNFRSF1A-203ENST00000437813 CNPY2Q9Y2B0 182 aa17.1■□□□□ 0.33
TNFRSF1A-203ENST00000437813 MYADML2A6NDP7 307 aa17.09■□□□□ 0.33
TNFRSF1A-203ENST00000437813 CTAGE5O15320 804 aa17.09■□□□□ 0.33
TNFRSF1A-203ENST00000437813 FGAP02671 866 aa17.09■□□□□ 0.33
TNFRSF1A-203ENST00000437813 MCCP23508 829 aa17.09■□□□□ 0.33
TNFRSF1A-203ENST00000437813 IRX5P78411 483 aaPredicted RBP17.09■□□□□ 0.33
TNFRSF1A-203ENST00000437813 CNTN2Q02246 1040 aa17.09■□□□□ 0.33
TNFRSF1A-203ENST00000437813 AAMPQ13685 434 aa17.09■□□□□ 0.33
TNFRSF1A-203ENST00000437813 RCSD1Q6JBY9 416 aa17.09■□□□□ 0.33
TNFRSF1A-203ENST00000437813 RNF180Q86T96 592 aa17.09■□□□□ 0.33
TNFRSF1A-203ENST00000437813 FAM160B2Q86V87 743 aa17.09■□□□□ 0.33
TNFRSF1A-203ENST00000437813 AGBL1Q96MI9 1066 aa17.09■□□□□ 0.33
TNFRSF1A-203ENST00000437813 UPF3AQ9H1J1 476 aaKnown RBP17.09■□□□□ 0.33
TNFRSF1A-203ENST00000437813 A1CFQ9NQ94 594 aaKnown RBP17.09■□□□□ 0.33
TNFRSF1A-203ENST00000437813 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.09■□□□□ 0.33
TNFRSF1A-203ENST00000437813 DUSP11O75319 330 aaKnown RBP17.08■□□□□ 0.32
TNFRSF1A-203ENST00000437813 SLC1A4P43007 532 aa17.08■□□□□ 0.32
TNFRSF1A-203ENST00000437813 ACLYP53396 1101 aa17.08■□□□□ 0.32
TNFRSF1A-203ENST00000437813 ACVR2BQ13705 512 aa17.08■□□□□ 0.32
TNFRSF1A-203ENST00000437813 FAM109BQ6ICB4 259 aaPredicted RBP17.08■□□□□ 0.32
TNFRSF1A-203ENST00000437813 ARMCX2Q7L311 632 aa17.08■□□□□ 0.32
TNFRSF1A-203ENST00000437813 ANKRD33Q7Z3H0 272 aa17.08■□□□□ 0.32
TNFRSF1A-203ENST00000437813 CHURC1Q8WUH1 139 aa17.08■□□□□ 0.32
TNFRSF1A-203ENST00000437813 LBHD1Q9BQE6 289 aaPredicted RBP17.08■□□□□ 0.32
TNFRSF1A-203ENST00000437813 ABHD16BQ9H3Z7 469 aa17.08■□□□□ 0.32
TNFRSF1A-203ENST00000437813 FAM184BQ9ULE4 1060 aa17.08■□□□□ 0.32
TNFRSF1A-203ENST00000437813 SOWAHBA6NEL2 793 aa17.07■□□□□ 0.32
TNFRSF1A-203ENST00000437813 TSPY2A6NKD2 308 aa17.07■□□□□ 0.32
TNFRSF1A-203ENST00000437813 KIAA0355O15063 1070 aa17.07■□□□□ 0.32
TNFRSF1A-203ENST00000437813 HSPD1P10809 573 aaKnown RBP17.07■□□□□ 0.32
TNFRSF1A-203ENST00000437813 NMIQ13287 307 aaPredicted RBP17.07■□□□□ 0.32
TNFRSF1A-203ENST00000437813 CCDC144BQ3MJ40 725 aa17.07■□□□□ 0.32
TNFRSF1A-203ENST00000437813 MCMDC2Q4G0Z9 681 aa17.07■□□□□ 0.32
TNFRSF1A-203ENST00000437813 PPP4R3BQ5MIZ7 849 aa17.07■□□□□ 0.32
TNFRSF1A-203ENST00000437813 C9orf50Q5SZB4 431 aa17.07■□□□□ 0.32
TNFRSF1A-203ENST00000437813 BTNL9Q6UXG8 535 aa17.07■□□□□ 0.32
TNFRSF1A-203ENST00000437813 KCTD1Q719H9 257 aa17.07■□□□□ 0.32
TNFRSF1A-203ENST00000437813 CCDC144CPQ8IYA2 1237 aa17.07■□□□□ 0.32
TNFRSF1A-203ENST00000437813 BADQ92934 168 aa17.07■□□□□ 0.32
TNFRSF1A-203ENST00000437813 LNPKQ9C0E8 428 aa17.07■□□□□ 0.32
TNFRSF1A-203ENST00000437813 OSBPL3Q9H4L5 887 aa17.07■□□□□ 0.32
TNFRSF1A-203ENST00000437813 ACAD9Q9H845 621 aa17.07■□□□□ 0.32
TNFRSF1A-203ENST00000437813 TCP11L1Q9NUJ3 509 aa17.07■□□□□ 0.32
TNFRSF1A-203ENST00000437813 PRR12Q9ULL5 1215 aa17.07■□□□□ 0.32
TNFRSF1A-203ENST00000437813 STX8Q9UNK0 236 aa17.07■□□□□ 0.32
TNFRSF1A-203ENST00000437813 LAMA4Q16363 1823 aa17.07■□□□□ 0.32
TNFRSF1A-203ENST00000437813 IGHDP01880 384 aa17.06■□□□□ 0.32
TNFRSF1A-203ENST00000437813 MYCNP04198 464 aaPredicted RBP17.06■□□□□ 0.32
TNFRSF1A-203ENST00000437813 CDK7P50613 346 aa17.06■□□□□ 0.32
TNFRSF1A-203ENST00000437813 GJA9P57773 515 aa17.06■□□□□ 0.32
TNFRSF1A-203ENST00000437813 SHHQ15465 462 aa17.06■□□□□ 0.32
TNFRSF1A-203ENST00000437813 TKFCQ3LXA3 575 aa17.06■□□□□ 0.32
TNFRSF1A-203ENST00000437813 MUM1L1Q5H9M0 696 aa17.06■□□□□ 0.32
TNFRSF1A-203ENST00000437813 ANKRD35Q8N283 1001 aa17.06■□□□□ 0.32
TNFRSF1A-203ENST00000437813 TOX2Q96NM4 488 aa17.06■□□□□ 0.32
TNFRSF1A-203ENST00000437813 HOMER2Q9NSB8 354 aa17.06■□□□□ 0.32
TNFRSF1A-203ENST00000437813 RNF146Q9NTX7 359 aa17.06■□□□□ 0.32
TNFRSF1A-203ENST00000437813 MOXD2PA6NHM9 499 aa17.05■□□□□ 0.32
TNFRSF1A-203ENST00000437813 RANBP6O60518 1105 aaKnown RBP17.05■□□□□ 0.32
TNFRSF1A-203ENST00000437813 SLC4A3P48751 1232 aa17.05■□□□□ 0.32
TNFRSF1A-203ENST00000437813 EPHB4P54760 987 aa17.05■□□□□ 0.32
TNFRSF1A-203ENST00000437813 FAAP100Q0VG06 881 aa17.05■□□□□ 0.32
TNFRSF1A-203ENST00000437813 KCNA10Q16322 511 aa17.05■□□□□ 0.32
TNFRSF1A-203ENST00000437813 PLEKHM2Q8IWE5 1019 aa17.05■□□□□ 0.32
TNFRSF1A-203ENST00000437813 MORC4Q8TE76 937 aa17.05■□□□□ 0.32
TNFRSF1A-203ENST00000437813 PRKAG2Q9UGJ0 569 aa17.05■□□□□ 0.32
TNFRSF1A-203ENST00000437813 ZHX1Q9UKY1 873 aaPredicted RBP17.05■□□□□ 0.32
TNFRSF1A-203ENST00000437813 STXBP5LQ9Y2K9 1186 aa17.05■□□□□ 0.32
TNFRSF1A-203ENST00000437813 CCDC171Q6TFL3 1326 aa17.04■□□□□ 0.32
TNFRSF1A-203ENST00000437813 CLTBP09497 229 aa17.04■□□□□ 0.32
TNFRSF1A-203ENST00000437813 SNHG28P0DPA3 235 aa17.04■□□□□ 0.32
TNFRSF1A-203ENST00000437813 SNAP25P60880 206 aa17.04■□□□□ 0.32
TNFRSF1A-203ENST00000437813 NUCB1Q02818 461 aa17.04■□□□□ 0.32
TNFRSF1A-203ENST00000437813 TTBK2Q6IQ55 1244 aa17.04■□□□□ 0.32
TNFRSF1A-203ENST00000437813 TBC1D10CQ8IV04 446 aa17.04■□□□□ 0.32
TNFRSF1A-203ENST00000437813 DCAF4Q8WV16 495 aa17.04■□□□□ 0.32
TNFRSF1A-203ENST00000437813 GUCD1Q96NT3 240 aa17.04■□□□□ 0.32
TNFRSF1A-203ENST00000437813 TRERF1Q96PN7 1200 aa17.04■□□□□ 0.32
TNFRSF1A-203ENST00000437813 TMEM47Q9BQJ4 181 aa17.04■□□□□ 0.32
TNFRSF1A-203ENST00000437813 RANBP17Q9H2T7 1088 aaKnown RBP17.04■□□□□ 0.32
TNFRSF1A-203ENST00000437813 PRDM5Q9NQX1 630 aaPredicted RBP17.04■□□□□ 0.32
TNFRSF1A-203ENST00000437813 CYP39A1Q9NYL5 469 aa17.04■□□□□ 0.32
TNFRSF1A-203ENST00000437813 TBX21Q9UL17 535 aa17.04■□□□□ 0.32
TNFRSF1A-203ENST00000437813 GNEQ9Y223 722 aaKnown RBP17.04■□□□□ 0.32
TNFRSF1A-203ENST00000437813 DDX49Q9Y6V7 483 aaKnown RBP17.04■□□□□ 0.32
TNFRSF1A-203ENST00000437813 ELP1O95163 1332 aa17.03■□□□□ 0.32
TNFRSF1A-203ENST00000437813 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.03■□□□□ 0.32
TNFRSF1A-203ENST00000437813 ICAM1P05362 532 aa17.03■□□□□ 0.32
TNFRSF1A-203ENST00000437813 CHD1LQ86WJ1 897 aa17.03■□□□□ 0.32
TNFRSF1A-203ENST00000437813 CHMP4CQ96CF2 233 aa17.03■□□□□ 0.32
TNFRSF1A-203ENST00000437813 CTDP1Q9Y5B0 961 aaPredicted RBP17.03■□□□□ 0.32
TNFRSF1A-203ENST00000437813 UNC80Q8N2C7 3258 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms