RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 PSRC1Q6PGN9 363 aaPredicted RBP17.77■□□□□ 0.44
HDAC8-213ENST00000436675 FAM126BQ8IXS8 530 aa17.77■□□□□ 0.44
HDAC8-213ENST00000436675 ANKRD35Q8N283 1001 aa17.77■□□□□ 0.44
HDAC8-213ENST00000436675 GJA9P57773 515 aa17.76■□□□□ 0.43
HDAC8-213ENST00000436675 MRPS5P82675 430 aaKnown RBP17.76■□□□□ 0.43
HDAC8-213ENST00000436675 NOL8Q76FK4 1167 aaKnown RBP17.76■□□□□ 0.43
HDAC8-213ENST00000436675 ARMCX2Q7L311 632 aa17.76■□□□□ 0.43
HDAC8-213ENST00000436675 MICALL1Q8N3F8 863 aa17.76■□□□□ 0.43
HDAC8-213ENST00000436675 PRPF38AQ8NAV1 312 aaKnown RBP17.76■□□□□ 0.43
HDAC8-213ENST00000436675 IL27Q8NEV9 243 aa17.76■□□□□ 0.43
HDAC8-213ENST00000436675 FGD4Q96M96 766 aa17.76■□□□□ 0.43
HDAC8-213ENST00000436675 UHRF1Q96T88 793 aaPredicted RBP17.76■□□□□ 0.43
HDAC8-213ENST00000436675 PUS7LQ9H0K6 701 aaKnown RBP17.76■□□□□ 0.43
HDAC8-213ENST00000436675 UPF3AQ9H1J1 476 aaKnown RBP17.76■□□□□ 0.43
HDAC8-213ENST00000436675 ABHD16BQ9H3Z7 469 aa17.76■□□□□ 0.43
HDAC8-213ENST00000436675 IL23AQ9NPF7 189 aa17.76■□□□□ 0.43
HDAC8-213ENST00000436675 HOMER2Q9NSB8 354 aa17.76■□□□□ 0.43
HDAC8-213ENST00000436675 UMODL1Q5DID0 1318 aa17.75■□□□□ 0.43
HDAC8-213ENST00000436675 ZBED9Q6R2W3 1325 aa17.75■□□□□ 0.43
HDAC8-213ENST00000436675 MINDY4BA8MYZ0 360 aa17.75■□□□□ 0.43
HDAC8-213ENST00000436675 RASA1P20936 1047 aa17.75■□□□□ 0.43
HDAC8-213ENST00000436675 RAB30Q15771 203 aa17.75■□□□□ 0.43
HDAC8-213ENST00000436675 OTOP2Q7RTS6 562 aa17.75■□□□□ 0.43
HDAC8-213ENST00000436675 ZNF467Q7Z7K2 595 aaPredicted RBP17.75■□□□□ 0.43
HDAC8-213ENST00000436675 CCDC144CPQ8IYA2 1237 aa17.75■□□□□ 0.43
HDAC8-213ENST00000436675 MKNK2Q9HBH9 465 aa17.75■□□□□ 0.43
HDAC8-213ENST00000436675 CLIP2Q9UDT6 1046 aa17.75■□□□□ 0.43
HDAC8-213ENST00000436675 YBX2Q9Y2T7 364 aaKnown RBP17.75■□□□□ 0.43
HDAC8-213ENST00000436675 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.74■□□□□ 0.43
HDAC8-213ENST00000436675 CTAGE5O15320 804 aa17.74■□□□□ 0.43
HDAC8-213ENST00000436675 FGBP02675 491 aa17.74■□□□□ 0.43
HDAC8-213ENST00000436675 ATP5JP18859 108 aa17.74■□□□□ 0.43
HDAC8-213ENST00000436675 PTGS1P23219 599 aa17.74■□□□□ 0.43
HDAC8-213ENST00000436675 RABGGTBP53611 331 aa17.74■□□□□ 0.43
HDAC8-213ENST00000436675 CCL23P55773 120 aa17.74■□□□□ 0.43
HDAC8-213ENST00000436675 CNTN2Q02246 1040 aa17.74■□□□□ 0.43
HDAC8-213ENST00000436675 UBE3CQ15386 1083 aa17.74■□□□□ 0.43
HDAC8-213ENST00000436675 CXCL17Q6UXB2 119 aa17.74■□□□□ 0.43
HDAC8-213ENST00000436675 HERVK_113Q902F9 699 aa17.74■□□□□ 0.43
HDAC8-213ENST00000436675 CHMP4CQ96CF2 233 aa17.74■□□□□ 0.43
HDAC8-213ENST00000436675 NECAB3Q96P71 396 aaPredicted RBP17.74■□□□□ 0.43
HDAC8-213ENST00000436675 HAUS7Q99871 368 aa17.74■□□□□ 0.43
HDAC8-213ENST00000436675 SLC28A3Q9HAS3 691 aa17.74■□□□□ 0.43
HDAC8-213ENST00000436675 NYAP2Q9P242 653 aa17.74■□□□□ 0.43
HDAC8-213ENST00000436675 ISY1Q9ULR0 285 aaKnown RBP17.74■□□□□ 0.43
HDAC8-213ENST00000436675 TRANK1O15050 2925 aa17.73■□□□□ 0.43
HDAC8-213ENST00000436675 CD4P01730 458 aa17.73■□□□□ 0.43
HDAC8-213ENST00000436675 SIRT2Q8IXJ6 389 aa17.73■□□□□ 0.43
HDAC8-213ENST00000436675 HIPK3Q9H422 1215 aa17.73■□□□□ 0.43
HDAC8-213ENST00000436675 ARPP21Q9UBL0 812 aaPredicted RBP17.73■□□□□ 0.43
HDAC8-213ENST00000436675 DDX49Q9Y6V7 483 aaKnown RBP17.73■□□□□ 0.43
HDAC8-213ENST00000436675 ATP2A1O14983 1001 aa17.72■□□□□ 0.43
HDAC8-213ENST00000436675 MYOGP15173 224 aa17.72■□□□□ 0.43
HDAC8-213ENST00000436675 TNFAIP2Q03169 654 aa17.72■□□□□ 0.43
HDAC8-213ENST00000436675 LRRC47Q8N1G4 583 aaKnown RBP17.72■□□□□ 0.43
HDAC8-213ENST00000436675 TRPV6Q9H1D0 765 aa17.72■□□□□ 0.43
HDAC8-213ENST00000436675 MTIF3Q9H2K0 278 aaKnown RBP17.72■□□□□ 0.43
HDAC8-213ENST00000436675 SLC38A10Q9HBR0 1119 aa17.72■□□□□ 0.43
HDAC8-213ENST00000436675 ASTN1O14525 1302 aa17.72■□□□□ 0.43
HDAC8-213ENST00000436675 RAB11FIP3O75154 756 aa17.71■□□□□ 0.43
HDAC8-213ENST00000436675 HMMRO75330 724 aa17.71■□□□□ 0.43
HDAC8-213ENST00000436675 PRDM1O75626 825 aa17.71■□□□□ 0.43
HDAC8-213ENST00000436675 CHST13Q8NET6 341 aa17.71■□□□□ 0.43
HDAC8-213ENST00000436675 STRBPQ96SI9 672 aaKnown RBP17.71■□□□□ 0.43
HDAC8-213ENST00000436675 KATNBL1Q9H079 304 aa17.71■□□□□ 0.43
HDAC8-213ENST00000436675 FBXO40Q9UH90 709 aa17.71■□□□□ 0.43
HDAC8-213ENST00000436675 PRRC2BQ5JSZ5 2229 aaKnown RBP17.71■□□□□ 0.43
HDAC8-213ENST00000436675 ZBBXA8MT70 800 aa17.7■□□□□ 0.42
HDAC8-213ENST00000436675 GSG1L2A8MUP6 293 aa17.7■□□□□ 0.42
HDAC8-213ENST00000436675 HNRNPUQ00839 825 aaKnown RBP eCLIP17.7■□□□□ 0.42
HDAC8-213ENST00000436675 TFF2Q03403 129 aa17.7■□□□□ 0.42
HDAC8-213ENST00000436675 ITGA7Q13683 1181 aa17.7■□□□□ 0.42
HDAC8-213ENST00000436675 SBK1Q52WX2 424 aa17.7■□□□□ 0.42
HDAC8-213ENST00000436675 ZSCAN25Q6NSZ9 544 aa17.7■□□□□ 0.42
HDAC8-213ENST00000436675 TLK2Q86UE8 772 aa17.7■□□□□ 0.42
HDAC8-213ENST00000436675 RPAP2Q8IXW5 612 aaPredicted RBP17.7■□□□□ 0.42
HDAC8-213ENST00000436675 FEM1BQ9UK73 627 aa17.7■□□□□ 0.42
HDAC8-213ENST00000436675 GRIN2DO15399 1336 aa17.7■□□□□ 0.42
HDAC8-213ENST00000436675 SOWAHBA6NEL2 793 aa17.69■□□□□ 0.42
HDAC8-213ENST00000436675 DYNC1LI2O43237 492 aaPredicted RBP17.69■□□□□ 0.42
HDAC8-213ENST00000436675 SMARCA5O60264 1052 aaPredicted RBP17.69■□□□□ 0.42
HDAC8-213ENST00000436675 PSMC6P62333 389 aa17.69■□□□□ 0.42
HDAC8-213ENST00000436675 SKIV2LQ15477 1246 aaKnown RBP17.69■□□□□ 0.42
HDAC8-213ENST00000436675 FSCN1Q16658 493 aaKnown RBP17.69■□□□□ 0.42
HDAC8-213ENST00000436675 PPP2R2DQ66LE6 453 aa17.69■□□□□ 0.42
HDAC8-213ENST00000436675 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.69■□□□□ 0.42
HDAC8-213ENST00000436675 EEPD1Q7L9B9 569 aa17.69■□□□□ 0.42
HDAC8-213ENST00000436675 ZNF444Q8N0Y2 327 aaPredicted RBP17.69■□□□□ 0.42
HDAC8-213ENST00000436675 SLC43A3Q8NBI5 491 aa17.69■□□□□ 0.42
HDAC8-213ENST00000436675 CEP95Q96GE4 821 aa17.69■□□□□ 0.42
HDAC8-213ENST00000436675 SCLYQ96I15 445 aa17.69■□□□□ 0.42
HDAC8-213ENST00000436675 NOC4LQ9BVI4 516 aaKnown RBP17.69■□□□□ 0.42
HDAC8-213ENST00000436675 AP5M1Q9H0R1 490 aa17.69■□□□□ 0.42
HDAC8-213ENST00000436675 WNT8AQ9H1J5 351 aa17.69■□□□□ 0.42
HDAC8-213ENST00000436675 TSPYL2Q9H2G4 693 aaPredicted RBP17.69■□□□□ 0.42
HDAC8-213ENST00000436675 SLC4A7Q9Y6M7 1214 aa17.69■□□□□ 0.42
HDAC8-213ENST00000436675 SCN5AQ14524 2016 aa17.69■□□□□ 0.42
HDAC8-213ENST00000436675 IGKV6D-41A0A0C4DH26 115 aa17.68■□□□□ 0.42
HDAC8-213ENST00000436675 RFXAPO00287 272 aa17.68■□□□□ 0.42
HDAC8-213ENST00000436675 B4GALT4O60513 344 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms