RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 NKRFO15226 690 aaKnown RBP eCLIP11.72□□□□□ -0.536e-8■□□□□ 10.9
CLSTN1-203ENST00000435891 KLRC4O43908 158 aa11.72□□□□□ -0.53
CLSTN1-203ENST00000435891 ZNF569Q5MCW4 686 aa11.72□□□□□ -0.53
CLSTN1-203ENST00000435891 RC3H1Q5TC82 1133 aaKnown RBP11.72□□□□□ -0.53
CLSTN1-203ENST00000435891 TMCO3Q6UWJ1 677 aa11.72□□□□□ -0.53
CLSTN1-203ENST00000435891 DTHD1Q6ZMT9 781 aa11.72□□□□□ -0.53
CLSTN1-203ENST00000435891 PARD6BQ9BYG5 372 aa11.72□□□□□ -0.53
CLSTN1-203ENST00000435891 PUF60Q9UHX1 559 aaKnown RBP11.72□□□□□ -0.53
CLSTN1-203ENST00000435891 COL24A1Q17RW2 1714 aa11.72□□□□□ -0.53
CLSTN1-203ENST00000435891 CNGA4Q8IV77 575 aa11.71□□□□□ -0.53
CLSTN1-203ENST00000435891 CNPY4Q8N129 248 aa11.71□□□□□ -0.53
CLSTN1-203ENST00000435891 RASSF8Q8NHQ8 419 aa11.71□□□□□ -0.53
CLSTN1-203ENST00000435891 ANKS1AQ92625 1134 aa11.71□□□□□ -0.53
CLSTN1-203ENST00000435891 NUP88Q99567 741 aaPredicted RBP11.71□□□□□ -0.53
CLSTN1-203ENST00000435891 TFR2Q9UP52 801 aa11.71□□□□□ -0.53
CLSTN1-203ENST00000435891 SBF2Q86WG5 1849 aa11.71□□□□□ -0.53
CLSTN1-203ENST00000435891 ITIH6Q6UXX5 1313 aa11.71□□□□□ -0.53
CLSTN1-203ENST00000435891 PALM3A6NDB9 673 aaPredicted RBP11.71□□□□□ -0.53
CLSTN1-203ENST00000435891 FECHP22830 423 aa11.71□□□□□ -0.53
CLSTN1-203ENST00000435891 UBXN1Q04323 297 aa11.71□□□□□ -0.53
CLSTN1-203ENST00000435891 SPTY2D1Q68D10 685 aaPredicted RBP11.71□□□□□ -0.53
CLSTN1-203ENST00000435891 USP17L2Q6R6M4 530 aa11.71□□□□□ -0.53
CLSTN1-203ENST00000435891 ZNF444Q8N0Y2 327 aaPredicted RBP11.71□□□□□ -0.53
CLSTN1-203ENST00000435891 ADSSL1Q8N142 457 aa11.71□□□□□ -0.53
CLSTN1-203ENST00000435891 NAA15Q9BXJ9 866 aaKnown RBP11.71□□□□□ -0.53
CLSTN1-203ENST00000435891 BARHL2Q9NY43 387 aa11.71□□□□□ -0.53
CLSTN1-203ENST00000435891 TRIM10Q9UDY6 481 aa11.71□□□□□ -0.53
CLSTN1-203ENST00000435891 MAST2Q6P0Q8 1798 aa11.71□□□□□ -0.54
CLSTN1-203ENST00000435891 TBC1D8O95759 1140 aa11.71□□□□□ -0.54
CLSTN1-203ENST00000435891 KRT9P35527 623 aa11.71□□□□□ -0.54
CLSTN1-203ENST00000435891 SKIDA1Q1XH10 827 aa11.71□□□□□ -0.54
CLSTN1-203ENST00000435891 SLC35F6Q8N357 371 aa11.71□□□□□ -0.54
CLSTN1-203ENST00000435891 BANK1Q8NDB2 785 aa11.71□□□□□ -0.54
CLSTN1-203ENST00000435891 SLF1Q9BQI6 1058 aa11.71□□□□□ -0.54
CLSTN1-203ENST00000435891 RTFDC1Q9BY42 306 aaPredicted RBP11.71□□□□□ -0.54
CLSTN1-203ENST00000435891 SH3GLB2Q9NR46 395 aa11.71□□□□□ -0.54
CLSTN1-203ENST00000435891 PARP1P09874 1014 aaKnown RBP11.7□□□□□ -0.54
CLSTN1-203ENST00000435891 ARHGAP25P42331 645 aa11.7□□□□□ -0.54
CLSTN1-203ENST00000435891 CC2D1AQ6P1N0 951 aaPredicted RBP11.7□□□□□ -0.54
CLSTN1-203ENST00000435891 WDR66Q8TBY9 1149 aa11.7□□□□□ -0.54
CLSTN1-203ENST00000435891 NGLY1Q96IV0 654 aa11.7□□□□□ -0.54
CLSTN1-203ENST00000435891 EFCC1Q9HA90 598 aa11.7□□□□□ -0.54
CLSTN1-203ENST00000435891 KLRF2D3W0D1 207 aa11.7□□□□□ -0.54
CLSTN1-203ENST00000435891 TULP2O00295 520 aa11.7□□□□□ -0.54
CLSTN1-203ENST00000435891 UBA7P41226 1012 aa11.7□□□□□ -0.54
CLSTN1-203ENST00000435891 VAT1LQ9HCJ6 419 aa11.7□□□□□ -0.54
CLSTN1-203ENST00000435891 REXO2Q9Y3B8 237 aaKnown RBP11.7□□□□□ -0.54
CLSTN1-203ENST00000435891 ZNF831Q5JPB2 1677 aa11.7□□□□□ -0.54
CLSTN1-203ENST00000435891 ROBO3Q96MS0 1386 aa11.7□□□□□ -0.54
CLSTN1-203ENST00000435891 SNED1Q8TER0 1413 aa11.7□□□□□ -0.54
CLSTN1-203ENST00000435891 TTC26A0AVF1 554 aa11.7□□□□□ -0.54
CLSTN1-203ENST00000435891 TXLNAP40222 546 aa11.7□□□□□ -0.54
CLSTN1-203ENST00000435891 GRAPQ13588 217 aa11.7□□□□□ -0.54
CLSTN1-203ENST00000435891 TXNRD1Q16881 649 aa11.7□□□□□ -0.54
CLSTN1-203ENST00000435891 GPR161Q8N6U8 529 aaKnown RBP11.7□□□□□ -0.54
CLSTN1-203ENST00000435891 GRAPLQ8TC17 118 aaPredicted RBP11.7□□□□□ -0.54
CLSTN1-203ENST00000435891 ARGLU1Q9NWB6 273 aaPredicted RBP11.7□□□□□ -0.54
CLSTN1-203ENST00000435891 CWC15Q9P013 229 aaKnown RBP11.7□□□□□ -0.54
CLSTN1-203ENST00000435891 FLT1P17948 1338 aa11.69□□□□□ -0.54
CLSTN1-203ENST00000435891 PES1O00541 588 aaKnown RBP11.69□□□□□ -0.54
CLSTN1-203ENST00000435891 KIF5CO60282 957 aa11.69□□□□□ -0.54
CLSTN1-203ENST00000435891 BTDP43251 543 aa11.69□□□□□ -0.54
CLSTN1-203ENST00000435891 GPSM2P81274 684 aa11.69□□□□□ -0.54
CLSTN1-203ENST00000435891 LETM2Q2VYF4 491 aa11.69□□□□□ -0.54
CLSTN1-203ENST00000435891 HPS3Q969F9 1004 aa11.69□□□□□ -0.54
CLSTN1-203ENST00000435891 ZCCHC17Q9NP64 241 aaKnown RBP11.69□□□□□ -0.54
CLSTN1-203ENST00000435891 KBTBD4Q9NVX7 518 aa11.69□□□□□ -0.54
CLSTN1-203ENST00000435891 CDK8P49336 464 aa11.69□□□□□ -0.54
CLSTN1-203ENST00000435891 PPP4CP60510 307 aa11.69□□□□□ -0.54
CLSTN1-203ENST00000435891 RMND1Q9NWS8 449 aa11.69□□□□□ -0.54
CLSTN1-203ENST00000435891 BTAF1O14981 1849 aa11.69□□□□□ -0.54
CLSTN1-203ENST00000435891 PLCG1P19174 1290 aa11.69□□□□□ -0.54
CLSTN1-203ENST00000435891 KLK7P49862 253 aa11.69□□□□□ -0.54
CLSTN1-203ENST00000435891 EYA3Q99504 573 aa11.69□□□□□ -0.54
CLSTN1-203ENST00000435891 DEF6Q9H4E7 631 aa11.69□□□□□ -0.54
CLSTN1-203ENST00000435891 BAG3O95817 575 aa11.68□□□□□ -0.54
CLSTN1-203ENST00000435891 RFC4P35249 363 aa11.68□□□□□ -0.54
CLSTN1-203ENST00000435891 NAPAP54920 295 aa11.68□□□□□ -0.54
CLSTN1-203ENST00000435891 TMTC1Q8IUR5 882 aa11.68□□□□□ -0.54
CLSTN1-203ENST00000435891 DAGLBQ8NCG7 672 aa11.68□□□□□ -0.54
CLSTN1-203ENST00000435891 GOLGA1Q92805 767 aa11.68□□□□□ -0.54
CLSTN1-203ENST00000435891 PYM1Q9BRP8 204 aaKnown RBP11.68□□□□□ -0.54
CLSTN1-203ENST00000435891 UBA5Q9GZZ9 404 aa11.68□□□□□ -0.54
CLSTN1-203ENST00000435891 TCP11L1Q9NUJ3 509 aa11.68□□□□□ -0.54
CLSTN1-203ENST00000435891 RGL2O15211 777 aa11.68□□□□□ -0.54
CLSTN1-203ENST00000435891 CCNT1O60563 726 aaKnown RBP11.68□□□□□ -0.54
CLSTN1-203ENST00000435891 FCER1AP12319 257 aa11.68□□□□□ -0.54
CLSTN1-203ENST00000435891 CHMP4BP1P59074 171 aa11.68□□□□□ -0.54
CLSTN1-203ENST00000435891 SPAG1Q07617 926 aa11.68□□□□□ -0.54
CLSTN1-203ENST00000435891 STK4Q13043 487 aa11.68□□□□□ -0.54
CLSTN1-203ENST00000435891 KIF4BQ2VIQ3 1234 aa11.68□□□□□ -0.54
CLSTN1-203ENST00000435891 ZNF507Q8TCN5 953 aa11.68□□□□□ -0.54
CLSTN1-203ENST00000435891 RABGGTAQ92696 567 aa11.68□□□□□ -0.54
CLSTN1-203ENST00000435891 CCDC51Q96ER9 411 aa11.68□□□□□ -0.54
CLSTN1-203ENST00000435891 CEP95Q96GE4 821 aa11.68□□□□□ -0.54
CLSTN1-203ENST00000435891 MYCBPQ99417 103 aaPredicted RBP11.68□□□□□ -0.54
CLSTN1-203ENST00000435891 DUSP9Q99956 384 aaKnown RBP11.68□□□□□ -0.54
CLSTN1-203ENST00000435891 CCSER1Q9C0I3 900 aa11.68□□□□□ -0.54
CLSTN1-203ENST00000435891 ANKZF1Q9H8Y5 726 aa11.68□□□□□ -0.54
CLSTN1-203ENST00000435891 CDC23Q9UJX2 597 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms