RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 SEC23AQ15436 765 aa19.04■□□□□ 0.64
SMPD4-207ENST00000435455 DDX11Q96FC9 970 aa19.04■□□□□ 0.64
SMPD4-207ENST00000435455 MAML3Q96JK9 1138 aa19.04■□□□□ 0.64
SMPD4-207ENST00000435455 CRISPLD2Q9H0B8 497 aa19.04■□□□□ 0.64
SMPD4-207ENST00000435455 RANBP17Q9H2T7 1088 aaKnown RBP19.04■□□□□ 0.64
SMPD4-207ENST00000435455 TAF6LQ9Y6J9 622 aa19.04■□□□□ 0.64
SMPD4-207ENST00000435455 MKI67P46013 3256 aaKnown RBP19.04■□□□□ 0.64
SMPD4-207ENST00000435455 ZNF536O15090 1300 aa19.03■□□□□ 0.64
SMPD4-207ENST00000435455 ERICH2A1L162 156 aa19.03■□□□□ 0.64
SMPD4-207ENST00000435455 IFIT3O14879 490 aaKnown RBP19.03■□□□□ 0.64
SMPD4-207ENST00000435455 SLC27A2O14975 620 aa19.03■□□□□ 0.64
SMPD4-207ENST00000435455 PGK2P07205 417 aa19.03■□□□□ 0.64
SMPD4-207ENST00000435455 CYP2C19P33261 490 aa19.03■□□□□ 0.64
SMPD4-207ENST00000435455 ZNF792Q3KQV3 632 aa19.03■□□□□ 0.64
SMPD4-207ENST00000435455 ASPRV1Q53RT3 343 aa19.03■□□□□ 0.64
SMPD4-207ENST00000435455 CCDC174Q6PII3 467 aa19.03■□□□□ 0.64
SMPD4-207ENST00000435455 STOX1Q6ZVD7 989 aa19.03■□□□□ 0.64
SMPD4-207ENST00000435455 ANKRD35Q8N283 1001 aa19.03■□□□□ 0.64
SMPD4-207ENST00000435455 AGBL1Q96MI9 1066 aa19.03■□□□□ 0.64
SMPD4-207ENST00000435455 ACAD9Q9H845 621 aa19.03■□□□□ 0.64
SMPD4-207ENST00000435455 RNF146Q9NTX7 359 aa19.03■□□□□ 0.64
SMPD4-207ENST00000435455 PNMA2Q9UL42 364 aa19.03■□□□□ 0.64
SMPD4-207ENST00000435455 ICAM1P05362 532 aa19.02■□□□□ 0.64
SMPD4-207ENST00000435455 ALAS1P13196 640 aa19.02■□□□□ 0.64
SMPD4-207ENST00000435455 NECTIN1Q15223 517 aa19.02■□□□□ 0.64
SMPD4-207ENST00000435455 RNF20Q5VTR2 975 aa19.02■□□□□ 0.64
SMPD4-207ENST00000435455 CREB3L3Q68CJ9 461 aa19.02■□□□□ 0.64
SMPD4-207ENST00000435455 HOMER2Q9NSB8 354 aa19.02■□□□□ 0.64
SMPD4-207ENST00000435455 CCPG1Q9ULG6 757 aa19.02■□□□□ 0.64
SMPD4-207ENST00000435455 DNAJC25-GNG10A0A024R161 153 aa19.01■□□□□ 0.63
SMPD4-207ENST00000435455 FARP2O94887 1054 aaPredicted RBP19.01■□□□□ 0.63
SMPD4-207ENST00000435455 CCND3P30281 292 aaPredicted RBP19.01■□□□□ 0.63
SMPD4-207ENST00000435455 SNAP25P60880 206 aa19.01■□□□□ 0.63
SMPD4-207ENST00000435455 WTAPQ15007 396 aa19.01■□□□□ 0.63
SMPD4-207ENST00000435455 MB21D2Q8IYB1 491 aaPredicted RBP19.01■□□□□ 0.63
SMPD4-207ENST00000435455 ANKLE1Q8NAG6 615 aa19.01■□□□□ 0.63
SMPD4-207ENST00000435455 TRERF1Q96PN7 1200 aa19.01■□□□□ 0.63
SMPD4-207ENST00000435455 MTA3Q9BTC8 594 aa19.01■□□□□ 0.63
SMPD4-207ENST00000435455 SMCHD1A6NHR9 2005 aa19.01■□□□□ 0.63
SMPD4-207ENST00000435455 MSCO60682 206 aa19■□□□□ 0.63
SMPD4-207ENST00000435455 PARP1P09874 1014 aaKnown RBP19■□□□□ 0.63
SMPD4-207ENST00000435455 GOLGA8HP0CJ92 632 aa19■□□□□ 0.63
SMPD4-207ENST00000435455 CYBAP13498 195 aa19■□□□□ 0.63
SMPD4-207ENST00000435455 MSL3Q8N5Y2 521 aaKnown RBP19■□□□□ 0.63
SMPD4-207ENST00000435455 TINF2Q9BSI4 451 aa19■□□□□ 0.63
SMPD4-207ENST00000435455 NRBP1Q9UHY1 535 aa19■□□□□ 0.63
SMPD4-207ENST00000435455 OGDHLQ9ULD0 1010 aa19■□□□□ 0.63
SMPD4-207ENST00000435455 FRMPD3Q5JV73 1810 aa19■□□□□ 0.63
SMPD4-207ENST00000435455 PFASO15067 1338 aa19■□□□□ 0.63
SMPD4-207ENST00000435455 CNGA1P29973 690 aa18.99■□□□□ 0.63
SMPD4-207ENST00000435455 TMEM67Q5HYA8 995 aa18.99■□□□□ 0.63
SMPD4-207ENST00000435455 UBE2Q1Q7Z7E8 422 aa18.99■□□□□ 0.63
SMPD4-207ENST00000435455 ZNF467Q7Z7K2 595 aaPredicted RBP18.99■□□□□ 0.63
SMPD4-207ENST00000435455 MYH6P13533 1939 aa18.99■□□□□ 0.63
SMPD4-207ENST00000435455 WDR19Q8NEZ3 1342 aa18.99■□□□□ 0.63
SMPD4-207ENST00000435455 MCM5P33992 734 aa18.98■□□□□ 0.63
SMPD4-207ENST00000435455 ANTXR2P58335 489 aa18.98■□□□□ 0.63
SMPD4-207ENST00000435455 LHX8Q68G74 356 aa18.98■□□□□ 0.63
SMPD4-207ENST00000435455 TRPV1Q8NER1 839 aa18.98■□□□□ 0.63
SMPD4-207ENST00000435455 UBA5Q9GZZ9 404 aa18.98■□□□□ 0.63
SMPD4-207ENST00000435455 A1CFQ9NQ94 594 aaKnown RBP18.98■□□□□ 0.63
SMPD4-207ENST00000435455 SYNGAP1Q96PV0 1343 aa18.98■□□□□ 0.63
SMPD4-207ENST00000435455 POTEB2H3BUK9 544 aa18.97■□□□□ 0.63
SMPD4-207ENST00000435455 SEPT4O43236 478 aa18.97■□□□□ 0.63
SMPD4-207ENST00000435455 PRC1O43663 620 aa18.97■□□□□ 0.63
SMPD4-207ENST00000435455 CHST3Q7LGC8 479 aa18.97■□□□□ 0.63
SMPD4-207ENST00000435455 ADGRF4Q8IZF3 695 aa18.97■□□□□ 0.63
SMPD4-207ENST00000435455 IGDCC4Q8TDY8 1250 aa18.97■□□□□ 0.63
SMPD4-207ENST00000435455 TMEM87BQ96K49 555 aa18.97■□□□□ 0.63
SMPD4-207ENST00000435455 DDX20Q9UHI6 824 aaKnown RBP18.97■□□□□ 0.63
SMPD4-207ENST00000435455 CNPY2Q9Y2B0 182 aa18.97■□□□□ 0.63
SMPD4-207ENST00000435455 MCM3APO60318 1980 aa18.96■□□□□ 0.63
SMPD4-207ENST00000435455 REC8O95072 547 aa18.96■□□□□ 0.63
SMPD4-207ENST00000435455 MUM1L1Q5H9M0 696 aa18.96■□□□□ 0.63
SMPD4-207ENST00000435455 MAMDC4Q6UXC1 1216 aa18.96■□□□□ 0.63
SMPD4-207ENST00000435455 CATIPQ7Z7H3 387 aa18.96■□□□□ 0.63
SMPD4-207ENST00000435455 TMTC2Q8N394 836 aa18.96■□□□□ 0.63
SMPD4-207ENST00000435455 HTATIP2Q9BUP3 242 aa18.96■□□□□ 0.63
SMPD4-207ENST00000435455 CPVLQ9H3G5 476 aa18.96■□□□□ 0.63
SMPD4-207ENST00000435455 KLRF2D3W0D1 207 aa18.95■□□□□ 0.62
SMPD4-207ENST00000435455 DHX16O60231 1041 aaKnown RBP18.95■□□□□ 0.62
SMPD4-207ENST00000435455 CNTN2Q02246 1040 aa18.95■□□□□ 0.62
SMPD4-207ENST00000435455 KRT32Q14532 448 aa18.95■□□□□ 0.62
SMPD4-207ENST00000435455 GRM4Q14833 912 aa18.95■□□□□ 0.62
SMPD4-207ENST00000435455 CDC37Q16543 378 aaPredicted RBP18.95■□□□□ 0.62
SMPD4-207ENST00000435455 TSGA10IPQ3SY00 556 aa18.95■□□□□ 0.62
SMPD4-207ENST00000435455 PRAMEF19Q5SWL8 479 aa18.95■□□□□ 0.62
SMPD4-207ENST00000435455 NSMFQ6X4W1 530 aa18.95■□□□□ 0.62
SMPD4-207ENST00000435455 NECAB2Q7Z6G3 386 aa18.95■□□□□ 0.62
SMPD4-207ENST00000435455 FAM133AQ8N9E0 248 aa18.95■□□□□ 0.62
SMPD4-207ENST00000435455 LY9Q9HBG7 655 aa18.95■□□□□ 0.62
SMPD4-207ENST00000435455 CYP39A1Q9NYL5 469 aa18.95■□□□□ 0.62
SMPD4-207ENST00000435455 MAD2L2Q9UI95 211 aa18.95■□□□□ 0.62
SMPD4-207ENST00000435455 CEP290O15078 2479 aa18.95■□□□□ 0.62
SMPD4-207ENST00000435455 PALM3A6NDB9 673 aaPredicted RBP18.94■□□□□ 0.62
SMPD4-207ENST00000435455 TROAPQ12815 778 aa18.94■□□□□ 0.62
SMPD4-207ENST00000435455 STAG2Q8N3U4 1231 aa18.94■□□□□ 0.62
SMPD4-207ENST00000435455 PAWRQ96IZ0 340 aaKnown RBP18.94■□□□□ 0.62
SMPD4-207ENST00000435455 FGD4Q96M96 766 aa18.94■□□□□ 0.62
SMPD4-207ENST00000435455 MAP3K14Q99558 947 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms