RNA–Protein interactions for RNA: ENST00000434333.1

HLA-B-250, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-250ENST00000434333 PHF24Q9UPV7 400 aa23.81■■□□□ 1.4
HLA-B-250ENST00000434333 CNPY2Q9Y2B0 182 aa23.81■■□□□ 1.4
HLA-B-250ENST00000434333 ATP11BQ9Y2G3 1177 aa23.81■■□□□ 1.4
HLA-B-250ENST00000434333 CCDC171Q6TFL3 1326 aa23.81■■□□□ 1.4
HLA-B-250ENST00000434333 MCM3APO60318 1980 aa23.8■■□□□ 1.4
HLA-B-250ENST00000434333 TRIM60Q495X7 471 aa23.8■■□□□ 1.4
HLA-B-250ENST00000434333 C1orf53Q5VUE5 145 aa23.8■■□□□ 1.4
HLA-B-250ENST00000434333 RCSD1Q6JBY9 416 aa23.8■■□□□ 1.4
HLA-B-250ENST00000434333 ANKRD35Q8N283 1001 aa23.8■■□□□ 1.4
HLA-B-250ENST00000434333 ISY1Q9ULR0 285 aaKnown RBP23.8■■□□□ 1.4
HLA-B-250ENST00000434333 RILPL2Q969X0 211 aa23.79■■□□□ 1.4
HLA-B-250ENST00000434333 AGBL1Q96MI9 1066 aa23.79■■□□□ 1.4
HLA-B-250ENST00000434333 HOMER2Q9NSB8 354 aa23.79■■□□□ 1.4
HLA-B-250ENST00000434333 SDSP20132 328 aa23.78■■□□□ 1.4
HLA-B-250ENST00000434333 RNF180Q86T96 592 aa23.78■■□□□ 1.4
HLA-B-250ENST00000434333 ACAD9Q9H845 621 aa23.78■■□□□ 1.4
HLA-B-250ENST00000434333 RNF146Q9NTX7 359 aa23.78■■□□□ 1.4
HLA-B-250ENST00000434333 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.78■■□□□ 1.4
HLA-B-250ENST00000434333 PRR12Q9ULL5 1215 aa23.78■■□□□ 1.4
HLA-B-250ENST00000434333 SYNRGQ9UMZ2 1314 aa23.78■■□□□ 1.4
HLA-B-250ENST00000434333 ADCY6O43306 1168 aa23.77■■□□□ 1.4
HLA-B-250ENST00000434333 SNAP25P60880 206 aa23.77■■□□□ 1.4
HLA-B-250ENST00000434333 HAND2P61296 217 aa23.77■■□□□ 1.4
HLA-B-250ENST00000434333 IKQ13123 557 aaPredicted RBP23.77■■□□□ 1.4
HLA-B-250ENST00000434333 FAM133AQ8N9E0 248 aa23.77■■□□□ 1.4
HLA-B-250ENST00000434333 KATNBL1Q9H079 304 aa23.77■■□□□ 1.4
HLA-B-250ENST00000434333 A1CFQ9NQ94 594 aaKnown RBP23.77■■□□□ 1.4
HLA-B-250ENST00000434333 PDLIM7Q9NR12 457 aa23.77■■□□□ 1.4
HLA-B-250ENST00000434333 TOMM22Q9NS69 142 aa23.77■■□□□ 1.4
HLA-B-250ENST00000434333 TCP11L1Q9NUJ3 509 aa23.77■■□□□ 1.4
HLA-B-250ENST00000434333 ZHX1Q9UKY1 873 aaPredicted RBP23.77■■□□□ 1.4
HLA-B-250ENST00000434333 FAM184BQ9ULE4 1060 aa23.77■■□□□ 1.4
HLA-B-250ENST00000434333 CNTN2Q02246 1040 aa23.76■■□□□ 1.39
HLA-B-250ENST00000434333 ACVR2BQ13705 512 aa23.76■■□□□ 1.39
HLA-B-250ENST00000434333 RRP12Q5JTH9 1297 aaKnown RBP23.76■■□□□ 1.39
HLA-B-250ENST00000434333 GPR153Q6NV75 609 aa23.76■■□□□ 1.39
HLA-B-250ENST00000434333 ARMCX2Q7L311 632 aa23.76■■□□□ 1.39
HLA-B-250ENST00000434333 TBC1D10CQ8IV04 446 aa23.76■■□□□ 1.39
HLA-B-250ENST00000434333 KLHDC9Q8NEP7 349 aa23.76■■□□□ 1.39
HLA-B-250ENST00000434333 MTMR7Q9Y216 660 aa23.76■■□□□ 1.39
HLA-B-250ENST00000434333 A0A1W2PQ45 241 aaPredicted RBP23.75■■□□□ 1.39
HLA-B-250ENST00000434333 A0A1W2PQY0 241 aa23.75■■□□□ 1.39
HLA-B-250ENST00000434333 TKFCQ3LXA3 575 aa23.75■■□□□ 1.39
HLA-B-250ENST00000434333 CCSAPQ6IQ19 270 aaPredicted RBP23.75■■□□□ 1.39
HLA-B-250ENST00000434333 CCDC174Q6PII3 467 aa23.75■■□□□ 1.39
HLA-B-250ENST00000434333 SH3RF1Q7Z6J0 888 aa23.75■■□□□ 1.39
HLA-B-250ENST00000434333 DCAF4Q8WV16 495 aa23.75■■□□□ 1.39
HLA-B-250ENST00000434333 LBHD1Q9BQE6 289 aaPredicted RBP23.75■■□□□ 1.39
HLA-B-250ENST00000434333 TMEM47Q9BQJ4 181 aa23.75■■□□□ 1.39
HLA-B-250ENST00000434333 ABHD16BQ9H3Z7 469 aa23.75■■□□□ 1.39
HLA-B-250ENST00000434333 LRRC37A2A6NM11 1700 aa23.75■■□□□ 1.39
HLA-B-250ENST00000434333 LAMA4Q16363 1823 aa23.75■■□□□ 1.39
HLA-B-250ENST00000434333 LCTP09848 1927 aa23.74■■□□□ 1.39
HLA-B-250ENST00000434333 LAMA2P24043 3122 aaKnown RBP23.74■■□□□ 1.39
HLA-B-250ENST00000434333 MYADML2A6NDP7 307 aa23.74■■□□□ 1.39
HLA-B-250ENST00000434333 SOWAHBA6NEL2 793 aa23.74■■□□□ 1.39
HLA-B-250ENST00000434333 DUSP11O75319 330 aaKnown RBP23.74■■□□□ 1.39
HLA-B-250ENST00000434333 TOP1P11387 765 aaKnown RBP23.74■■□□□ 1.39
HLA-B-250ENST00000434333 ALAS1P13196 640 aa23.74■■□□□ 1.39
HLA-B-250ENST00000434333 IRX5P78411 483 aaPredicted RBP23.74■■□□□ 1.39
HLA-B-250ENST00000434333 MUM1L1Q5H9M0 696 aa23.74■■□□□ 1.39
HLA-B-250ENST00000434333 AKNAD1Q5T1N1 836 aa23.74■■□□□ 1.39
HLA-B-250ENST00000434333 TTBK2Q6IQ55 1244 aa23.74■■□□□ 1.39
HLA-B-250ENST00000434333 BTNL9Q6UXG8 535 aa23.74■■□□□ 1.39
HLA-B-250ENST00000434333 CCDC144CPQ8IYA2 1237 aa23.74■■□□□ 1.39
HLA-B-250ENST00000434333 TRERF1Q96PN7 1200 aa23.74■■□□□ 1.39
HLA-B-250ENST00000434333 TSEN34Q9BSV6 310 aaKnown RBP23.74■■□□□ 1.39
HLA-B-250ENST00000434333 PRKAG2Q9UGJ0 569 aa23.74■■□□□ 1.39
HLA-B-250ENST00000434333 ASTN1O14525 1302 aa23.74■■□□□ 1.39
HLA-B-250ENST00000434333 TRIM43BA6NCK2 446 aa23.73■■□□□ 1.39
HLA-B-250ENST00000434333 POTEB2H3BUK9 544 aa23.73■■□□□ 1.39
HLA-B-250ENST00000434333 TLE2Q04725 743 aa23.73■■□□□ 1.39
HLA-B-250ENST00000434333 CCDC96Q2M329 555 aa23.73■■□□□ 1.39
HLA-B-250ENST00000434333 CCDC144BQ3MJ40 725 aa23.73■■□□□ 1.39
HLA-B-250ENST00000434333 TRIM43Q96BQ3 446 aaPredicted RBP23.73■■□□□ 1.39
HLA-B-250ENST00000434333 RANBP17Q9H2T7 1088 aaKnown RBP23.73■■□□□ 1.39
HLA-B-250ENST00000434333 PRDM5Q9NQX1 630 aaPredicted RBP23.73■■□□□ 1.39
HLA-B-250ENST00000434333 COL6A3P12111 3177 aa23.73■■□□□ 1.39
HLA-B-250ENST00000434333 PCP11498 1178 aaKnown RBP23.72■■□□□ 1.39
HLA-B-250ENST00000434333 SLC16A2P36021 539 aa23.72■■□□□ 1.39
HLA-B-250ENST00000434333 ACLYP53396 1101 aa23.72■■□□□ 1.39
HLA-B-250ENST00000434333 NEDD4P46934 1319 aa23.72■■□□□ 1.39
HLA-B-250ENST00000434333 ICAM1P05362 532 aa23.71■■□□□ 1.39
HLA-B-250ENST00000434333 PDHBP11177 359 aa23.71■■□□□ 1.39
HLA-B-250ENST00000434333 CST5P28325 142 aaPredicted RBP23.71■■□□□ 1.39
HLA-B-250ENST00000434333 MFAP1P55081 439 aaKnown RBP23.71■■□□□ 1.39
HLA-B-250ENST00000434333 CWC27Q6UX04 472 aaKnown RBP23.71■■□□□ 1.39
HLA-B-250ENST00000434333 MFSD6Q6ZSS7 791 aa23.71■■□□□ 1.39
HLA-B-250ENST00000434333 UPF3AQ9H1J1 476 aaKnown RBP23.71■■□□□ 1.39
HLA-B-250ENST00000434333 FRMPD2Q68DX3 1309 aaPredicted RBP23.7■■□□□ 1.38
HLA-B-250ENST00000434333 MOXD2PA6NHM9 499 aa23.7■■□□□ 1.38
HLA-B-250ENST00000434333 ITGB8P26012 769 aa23.7■■□□□ 1.38
HLA-B-250ENST00000434333 KCNA10Q16322 511 aa23.7■■□□□ 1.38
HLA-B-250ENST00000434333 SYDE2Q5VT97 1194 aa23.7■■□□□ 1.38
HLA-B-250ENST00000434333 Q7L0L9 218 aa23.7■■□□□ 1.38
HLA-B-250ENST00000434333 BADQ92934 168 aa23.7■■□□□ 1.38
HLA-B-250ENST00000434333 TTC14Q96N46 770 aa23.7■■□□□ 1.38
HLA-B-250ENST00000434333 CYP39A1Q9NYL5 469 aa23.7■■□□□ 1.38
HLA-B-250ENST00000434333 CCPG1Q9ULG6 757 aa23.7■■□□□ 1.38
HLA-B-250ENST00000434333 DDX49Q9Y6V7 483 aaKnown RBP23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms