RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 CST5P28325 142 aaPredicted RBP17.61■□□□□ 0.41
RPUSD3-208ENST00000433972 ACLYP53396 1101 aa17.61■□□□□ 0.41
RPUSD3-208ENST00000433972 GLT1D1Q96MS3 346 aa17.61■□□□□ 0.41
RPUSD3-208ENST00000433972 HELLSQ9NRZ9 838 aa17.61■□□□□ 0.41
RPUSD3-208ENST00000433972 PQBP1O60828 265 aaKnown RBP17.6■□□□□ 0.41
RPUSD3-208ENST00000433972 SNAI1O95863 264 aaPredicted RBP17.6■□□□□ 0.41
RPUSD3-208ENST00000433972 ANKRD33Q7Z3H0 272 aa17.6■□□□□ 0.41
RPUSD3-208ENST00000433972 KLHDC9Q8NEP7 349 aa17.6■□□□□ 0.41
RPUSD3-208ENST00000433972 OTUD7AQ8TE49 926 aaPredicted RBP17.6■□□□□ 0.41
RPUSD3-208ENST00000433972 TMEM39AQ9NV64 488 aa17.6■□□□□ 0.41
RPUSD3-208ENST00000433972 ANAPC4Q9UJX5 808 aa17.6■□□□□ 0.41
RPUSD3-208ENST00000433972 ELP1O95163 1332 aa17.6■□□□□ 0.41
RPUSD3-208ENST00000433972 COL11A1P12107 1806 aaPredicted RBP17.6■□□□□ 0.41
RPUSD3-208ENST00000433972 SALL3Q9BXA9 1300 aa17.59■□□□□ 0.41
RPUSD3-208ENST00000433972 TRIM43BA6NCK2 446 aa17.59■□□□□ 0.41
RPUSD3-208ENST00000433972 ASB14A6NK59 587 aa17.59■□□□□ 0.41
RPUSD3-208ENST00000433972 KIAA0355O15063 1070 aa17.59■□□□□ 0.41
RPUSD3-208ENST00000433972 C6orf222P0C671 652 aaPredicted RBP17.59■□□□□ 0.41
RPUSD3-208ENST00000433972 SMAD3P84022 425 aaKnown RBP17.59■□□□□ 0.41
RPUSD3-208ENST00000433972 SHHQ15465 462 aa17.59■□□□□ 0.41
RPUSD3-208ENST00000433972 KCNA10Q16322 511 aa17.59■□□□□ 0.41
RPUSD3-208ENST00000433972 RCSD1Q6JBY9 416 aa17.59■□□□□ 0.41
RPUSD3-208ENST00000433972 CCDC174Q6PII3 467 aa17.59■□□□□ 0.41
RPUSD3-208ENST00000433972 ARMCX2Q7L311 632 aa17.59■□□□□ 0.41
RPUSD3-208ENST00000433972 SMC5Q8IY18 1101 aa17.59■□□□□ 0.41
RPUSD3-208ENST00000433972 TRIM43Q96BQ3 446 aaPredicted RBP17.59■□□□□ 0.41
RPUSD3-208ENST00000433972 HOMER2Q9NSB8 354 aa17.59■□□□□ 0.41
RPUSD3-208ENST00000433972 RNF146Q9NTX7 359 aa17.59■□□□□ 0.41
RPUSD3-208ENST00000433972 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.59■□□□□ 0.41
RPUSD3-208ENST00000433972 COL6A3P12111 3177 aa17.58■□□□□ 0.4
RPUSD3-208ENST00000433972 RANBP6O60518 1105 aaKnown RBP17.58■□□□□ 0.4
RPUSD3-208ENST00000433972 IGHDP01880 384 aa17.58■□□□□ 0.4
RPUSD3-208ENST00000433972 NEFLP07196 543 aa17.58■□□□□ 0.4
RPUSD3-208ENST00000433972 MCCP23508 829 aa17.58■□□□□ 0.4
RPUSD3-208ENST00000433972 ALX1Q15699 326 aa17.58■□□□□ 0.4
RPUSD3-208ENST00000433972 CCDC144BQ3MJ40 725 aa17.58■□□□□ 0.4
RPUSD3-208ENST00000433972 B4GALNT3Q6L9W6 998 aa17.58■□□□□ 0.4
RPUSD3-208ENST00000433972 PNMA2Q9UL42 364 aa17.58■□□□□ 0.4
RPUSD3-208ENST00000433972 ORC4O43929 436 aa17.57■□□□□ 0.4
RPUSD3-208ENST00000433972 PCP11498 1178 aaKnown RBP17.57■□□□□ 0.4
RPUSD3-208ENST00000433972 PDE1AP54750 535 aa17.57■□□□□ 0.4
RPUSD3-208ENST00000433972 MFAP1P55081 439 aaKnown RBP17.57■□□□□ 0.4
RPUSD3-208ENST00000433972 GJA9P57773 515 aa17.57■□□□□ 0.4
RPUSD3-208ENST00000433972 FPGSQ05932 587 aa17.57■□□□□ 0.4
RPUSD3-208ENST00000433972 MCMDC2Q4G0Z9 681 aa17.57■□□□□ 0.4
RPUSD3-208ENST00000433972 SH3RF1Q7Z6J0 888 aa17.57■□□□□ 0.4
RPUSD3-208ENST00000433972 CCDC144CPQ8IYA2 1237 aa17.57■□□□□ 0.4
RPUSD3-208ENST00000433972 DCAF4Q8WV16 495 aa17.57■□□□□ 0.4
RPUSD3-208ENST00000433972 VTI1AQ96AJ9 217 aa17.57■□□□□ 0.4
RPUSD3-208ENST00000433972 LENG1Q96BZ8 264 aaPredicted RBP17.57■□□□□ 0.4
RPUSD3-208ENST00000433972 TRERF1Q96PN7 1200 aa17.57■□□□□ 0.4
RPUSD3-208ENST00000433972 UPF3AQ9H1J1 476 aaKnown RBP17.57■□□□□ 0.4
RPUSD3-208ENST00000433972 TOMM22Q9NS69 142 aa17.57■□□□□ 0.4
RPUSD3-208ENST00000433972 ZMYM6O95789 1325 aa17.56■□□□□ 0.4
RPUSD3-208ENST00000433972 TMEM265A0A087WTH1 108 aa17.56■□□□□ 0.4
RPUSD3-208ENST00000433972 A0A0U1RQG5 324 aaPredicted RBP17.56■□□□□ 0.4
RPUSD3-208ENST00000433972 DLL1O00548 723 aa17.56■□□□□ 0.4
RPUSD3-208ENST00000433972 TLR3O15455 904 aaKnown RBP17.56■□□□□ 0.4
RPUSD3-208ENST00000433972 ASGR1P07306 291 aa17.56■□□□□ 0.4
RPUSD3-208ENST00000433972 ALAS1P13196 640 aa17.56■□□□□ 0.4
RPUSD3-208ENST00000433972 NT5C2P49902 561 aa17.56■□□□□ 0.4
RPUSD3-208ENST00000433972 CTDSPL2Q05D32 466 aa17.56■□□□□ 0.4
RPUSD3-208ENST00000433972 CCDC96Q2M329 555 aa17.56■□□□□ 0.4
RPUSD3-208ENST00000433972 CCSAPQ6IQ19 270 aaPredicted RBP17.56■□□□□ 0.4
RPUSD3-208ENST00000433972 CCDC129Q6ZRS4 1044 aa17.56■□□□□ 0.4
RPUSD3-208ENST00000433972 CHD1LQ86WJ1 897 aa17.56■□□□□ 0.4
RPUSD3-208ENST00000433972 FAM133AQ8N9E0 248 aa17.56■□□□□ 0.4
RPUSD3-208ENST00000433972 RNPC3Q96LT9 517 aaKnown RBP17.56■□□□□ 0.4
RPUSD3-208ENST00000433972 SEZ6LQ9BYH1 1024 aa17.56■□□□□ 0.4
RPUSD3-208ENST00000433972 A1CFQ9NQ94 594 aaKnown RBP17.56■□□□□ 0.4
RPUSD3-208ENST00000433972 LTBP2Q14767 1821 aa17.56■□□□□ 0.4
RPUSD3-208ENST00000433972 ZNF536O15090 1300 aa17.55■□□□□ 0.4
RPUSD3-208ENST00000433972 PLXNA1Q9UIW2 1896 aa17.55■□□□□ 0.4
RPUSD3-208ENST00000433972 ZEB2O60315 1214 aa17.55■□□□□ 0.4
RPUSD3-208ENST00000433972 CABYRO75952 493 aa17.55■□□□□ 0.4
RPUSD3-208ENST00000433972 NOVP48745 357 aa17.55■□□□□ 0.4
RPUSD3-208ENST00000433972 TNFAIP2Q03169 654 aa17.55■□□□□ 0.4
RPUSD3-208ENST00000433972 FAAP100Q0VG06 881 aa17.55■□□□□ 0.4
RPUSD3-208ENST00000433972 GNASQ5JWF2 1037 aa17.55■□□□□ 0.4
RPUSD3-208ENST00000433972 C9orf50Q5SZB4 431 aa17.55■□□□□ 0.4
RPUSD3-208ENST00000433972 KCTD1Q719H9 257 aa17.55■□□□□ 0.4
RPUSD3-208ENST00000433972 NOL8Q76FK4 1167 aaKnown RBP17.55■□□□□ 0.4
RPUSD3-208ENST00000433972 AGBL1Q96MI9 1066 aa17.55■□□□□ 0.4
RPUSD3-208ENST00000433972 LNPKQ9C0E8 428 aa17.55■□□□□ 0.4
RPUSD3-208ENST00000433972 IL17RBQ9NRM6 502 aa17.55■□□□□ 0.4
RPUSD3-208ENST00000433972 CCPG1Q9ULG6 757 aa17.55■□□□□ 0.4
RPUSD3-208ENST00000433972 PRR12Q9ULL5 1215 aa17.55■□□□□ 0.4
RPUSD3-208ENST00000433972 LOC102724159A0A0B4J2E5 919 aa17.54■□□□□ 0.4
RPUSD3-208ENST00000433972 FOXP2O15409 715 aa17.54■□□□□ 0.4
RPUSD3-208ENST00000433972 TIMP1P01033 207 aa17.54■□□□□ 0.4
RPUSD3-208ENST00000433972 ICAM1P05362 532 aa17.54■□□□□ 0.4
RPUSD3-208ENST00000433972 FGRP09769 529 aa17.54■□□□□ 0.4
RPUSD3-208ENST00000433972 TOP1P11387 765 aaKnown RBP17.54■□□□□ 0.4
RPUSD3-208ENST00000433972 NKX3-2P78367 333 aa17.54■□□□□ 0.4
RPUSD3-208ENST00000433972 NUCB1Q02818 461 aa17.54■□□□□ 0.4
RPUSD3-208ENST00000433972 PWP2Q15269 919 aaKnown RBP17.54■□□□□ 0.4
RPUSD3-208ENST00000433972 FGD4Q96M96 766 aa17.54■□□□□ 0.4
RPUSD3-208ENST00000433972 AP5M1Q9H0R1 490 aa17.54■□□□□ 0.4
RPUSD3-208ENST00000433972 TCP11L1Q9NUJ3 509 aa17.54■□□□□ 0.4
RPUSD3-208ENST00000433972 ADD3Q9UEY8 706 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms