RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 IFNKQ9P0W0 207 aa13.56□□□□□ -0.24
CTCFL-209ENST00000433949 SWAP70Q9UH65 585 aa13.56□□□□□ -0.24
CTCFL-209ENST00000433949 CCDC194A0A1B0GVG4 234 aa13.56□□□□□ -0.24
CTCFL-209ENST00000433949 DCAF8L1A6NGE4 600 aa13.56□□□□□ -0.24
CTCFL-209ENST00000433949 KLRF2D3W0D1 207 aa13.56□□□□□ -0.24
CTCFL-209ENST00000433949 hCG_1984214I3L0E3 225 aa13.56□□□□□ -0.24
CTCFL-209ENST00000433949 HLA-DOAP06340 250 aa13.56□□□□□ -0.24
CTCFL-209ENST00000433949 MORC3Q14149 939 aa13.56□□□□□ -0.24
CTCFL-209ENST00000433949 ISM2Q6H9L7 571 aa13.56□□□□□ -0.24
CTCFL-209ENST00000433949 MIGA2Q7L4E1 593 aa13.56□□□□□ -0.24
CTCFL-209ENST00000433949 PDILTQ8N807 584 aa13.56□□□□□ -0.24
CTCFL-209ENST00000433949 ZNF713Q8N859 430 aaPredicted RBP13.56□□□□□ -0.24
CTCFL-209ENST00000433949 CCDC150Q8NCX0 1101 aa13.56□□□□□ -0.24
CTCFL-209ENST00000433949 SYMPKQ92797 1274 aaKnown RBP13.56□□□□□ -0.24
CTCFL-209ENST00000433949 MAN1B1Q9UKM7 699 aa13.56□□□□□ -0.24
CTCFL-209ENST00000433949 GLTPD2A6NH11 291 aa13.55□□□□□ -0.24
CTCFL-209ENST00000433949 LAD1O00515 517 aa13.55□□□□□ -0.24
CTCFL-209ENST00000433949 LONP1P36776 959 aaKnown RBP13.55□□□□□ -0.24
CTCFL-209ENST00000433949 FANCCQ00597 558 aa13.55□□□□□ -0.24
CTCFL-209ENST00000433949 LRMPQ12912 555 aa13.55□□□□□ -0.24
CTCFL-209ENST00000433949 RASA3Q14644 834 aa13.55□□□□□ -0.24
CTCFL-209ENST00000433949 PPP4R3BQ5MIZ7 849 aa13.55□□□□□ -0.24
CTCFL-209ENST00000433949 FILIP1Q7Z7B0 1213 aa13.55□□□□□ -0.24
CTCFL-209ENST00000433949 GSDMAQ96QA5 445 aa13.55□□□□□ -0.24
CTCFL-209ENST00000433949 SERPINB13Q9UIV8 391 aa13.55□□□□□ -0.24
CTCFL-209ENST00000433949 DICER1Q9UPY3 1922 aaKnown RBP13.55□□□□□ -0.24
CTCFL-209ENST00000433949 MYH4Q9Y623 1939 aa13.55□□□□□ -0.24
CTCFL-209ENST00000433949 VWA3AA6NCI4 1184 aa13.55□□□□□ -0.24
CTCFL-209ENST00000433949 M0R2N6 131 aa13.55□□□□□ -0.24
CTCFL-209ENST00000433949 CYTH3O43739 400 aa13.55□□□□□ -0.24
CTCFL-209ENST00000433949 ERCC5P28715 1186 aaPredicted RBP13.55□□□□□ -0.24
CTCFL-209ENST00000433949 GNA11P29992 359 aa13.55□□□□□ -0.24
CTCFL-209ENST00000433949 TXLNAP40222 546 aa13.55□□□□□ -0.24
CTCFL-209ENST00000433949 EAPPQ56P03 285 aaPredicted RBP13.55□□□□□ -0.24
CTCFL-209ENST00000433949 SH3RF1Q7Z6J0 888 aa13.55□□□□□ -0.24
CTCFL-209ENST00000433949 IQUBQ8NA54 791 aa13.55□□□□□ -0.24
CTCFL-209ENST00000433949 ENOX1Q8TC92 643 aaKnown RBP13.55□□□□□ -0.24
CTCFL-209ENST00000433949 CEP95Q96GE4 821 aa13.55□□□□□ -0.24
CTCFL-209ENST00000433949 EPSTI1Q96J88 318 aa13.55□□□□□ -0.24
CTCFL-209ENST00000433949 TRIM34Q9BYJ4 488 aa13.55□□□□□ -0.24
CTCFL-209ENST00000433949 GGA3Q9NZ52 723 aa13.55□□□□□ -0.24
CTCFL-209ENST00000433949 SEC63Q9UGP8 760 aaKnown RBP13.55□□□□□ -0.24
CTCFL-209ENST00000433949 CNTNAP1P78357 1384 aa13.54□□□□□ -0.24
CTCFL-209ENST00000433949 FOXN1O15353 648 aa13.54□□□□□ -0.24
CTCFL-209ENST00000433949 GABPAQ06546 454 aa13.54□□□□□ -0.24
CTCFL-209ENST00000433949 WWC2Q6AWC2 1192 aa13.54□□□□□ -0.24
CTCFL-209ENST00000433949 USP49Q70CQ1 688 aa13.54□□□□□ -0.24
CTCFL-209ENST00000433949 HEATR3Q7Z4Q2 680 aa13.54□□□□□ -0.24
CTCFL-209ENST00000433949 C17orf53Q8N3J3 647 aaPredicted RBP13.54□□□□□ -0.24
CTCFL-209ENST00000433949 GPKOWQ92917 476 aaPredicted RBP eCLIP13.54□□□□□ -0.24
CTCFL-209ENST00000433949 DHX58Q96C10 678 aa13.54□□□□□ -0.24
CTCFL-209ENST00000433949 RRP36Q96EU6 259 aaKnown RBP13.54□□□□□ -0.24
CTCFL-209ENST00000433949 ZMYND12Q9H0C1 365 aa13.54□□□□□ -0.24
CTCFL-209ENST00000433949 HSD3B7Q9H2F3 369 aa13.54□□□□□ -0.24
CTCFL-209ENST00000433949 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.54□□□□□ -0.24
CTCFL-209ENST00000433949 PI4KBQ9UBF8 816 aa13.54□□□□□ -0.24
CTCFL-209ENST00000433949 STXBP3O00186 592 aa13.54□□□□□ -0.24
CTCFL-209ENST00000433949 ENTPD3O75355 529 aa13.54□□□□□ -0.24
CTCFL-209ENST00000433949 SERPINC1P01008 464 aa13.54□□□□□ -0.24
CTCFL-209ENST00000433949 VEGFAP15692 232 aaPredicted RBP13.54□□□□□ -0.24
CTCFL-209ENST00000433949 BMP6P22004 513 aa13.54□□□□□ -0.24
CTCFL-209ENST00000433949 MCM7P33993 719 aa13.54□□□□□ -0.24
CTCFL-209ENST00000433949 UBASH3AP57075 661 aa13.54□□□□□ -0.24
CTCFL-209ENST00000433949 SHROOM1Q2M3G4 852 aaPredicted RBP13.54□□□□□ -0.24
CTCFL-209ENST00000433949 FAM151AQ8WW52 585 aa13.54□□□□□ -0.24
CTCFL-209ENST00000433949 DEFB129Q9H1M3 183 aa13.54□□□□□ -0.24
CTCFL-209ENST00000433949 DHX36Q9H2U1 1008 aaKnown RBP13.54□□□□□ -0.24
CTCFL-209ENST00000433949 ADARB2Q9NS39 739 aaKnown RBP13.54□□□□□ -0.24
CTCFL-209ENST00000433949 GREB1LQ9C091 1923 aaPredicted RBP13.53□□□□□ -0.24
CTCFL-209ENST00000433949 MPHOSPH10O00566 681 aaKnown RBP13.53□□□□□ -0.24
CTCFL-209ENST00000433949 WNT7AO00755 349 aa13.53□□□□□ -0.24
CTCFL-209ENST00000433949 PRR29P0C7W0 189 aa13.53□□□□□ -0.24
CTCFL-209ENST00000433949 SKILP12757 684 aa13.53□□□□□ -0.24
CTCFL-209ENST00000433949 ASPRV1Q53RT3 343 aa13.53□□□□□ -0.24
CTCFL-209ENST00000433949 NOM1Q5C9Z4 860 aaKnown RBP13.53□□□□□ -0.24
CTCFL-209ENST00000433949 KRT25Q7Z3Z0 450 aa13.53□□□□□ -0.24
CTCFL-209ENST00000433949 DNAJC18Q9H819 358 aa13.53□□□□□ -0.24
CTCFL-209ENST00000433949 C6orf50Q9HD87 102 aa13.53□□□□□ -0.24
CTCFL-209ENST00000433949 KCND1Q9NSA2 647 aa13.53□□□□□ -0.24
CTCFL-209ENST00000433949 FZD1Q9UP38 647 aa13.53□□□□□ -0.24
CTCFL-209ENST00000433949 UQCRHLA0A096LP55 91 aa13.52□□□□□ -0.24
CTCFL-209ENST00000433949 ESYT2A0FGR8 921 aa13.52□□□□□ -0.24
CTCFL-209ENST00000433949 DYNC1I1O14576 645 aa13.52□□□□□ -0.24
CTCFL-209ENST00000433949 UQCRHP07919 91 aa13.52□□□□□ -0.24
CTCFL-209ENST00000433949 SFPQP23246 707 aaKnown RBP eCLIP13.52□□□□□ -0.24
CTCFL-209ENST00000433949 EPHX2P34913 555 aa13.52□□□□□ -0.24
CTCFL-209ENST00000433949 PRPHP41219 470 aa13.52□□□□□ -0.24
CTCFL-209ENST00000433949 KCNJ6P48051 423 aa13.52□□□□□ -0.24
CTCFL-209ENST00000433949 ORC2Q13416 577 aaPredicted RBP13.52□□□□□ -0.24
CTCFL-209ENST00000433949 MYRIPQ8NFW9 859 aa13.52□□□□□ -0.24
CTCFL-209ENST00000433949 PAGE5Q96GU1 130 aa13.52□□□□□ -0.24
CTCFL-209ENST00000433949 MTMR4Q9NYA4 1195 aa13.52□□□□□ -0.24
CTCFL-209ENST00000433949 PCDHA6Q9UN73 950 aa13.52□□□□□ -0.24
CTCFL-209ENST00000433949 MTMR7Q9Y216 660 aa13.52□□□□□ -0.24
CTCFL-209ENST00000433949 PCDHA8Q9Y5H6 950 aa13.52□□□□□ -0.24
CTCFL-209ENST00000433949 TNNI2P48788 182 aa13.52□□□□□ -0.25
CTCFL-209ENST00000433949 NAPAP54920 295 aa13.52□□□□□ -0.25
CTCFL-209ENST00000433949 DPYDQ12882 1025 aa13.52□□□□□ -0.25
CTCFL-209ENST00000433949 TYW1BQ6NUM6 668 aa13.52□□□□□ -0.25
CTCFL-209ENST00000433949 TMC6Q7Z403 805 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms