RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 MMP19Q99542 508 aa18.08■□□□□ 0.48
TREX1-201ENST00000433541 UPF2Q9HAU5 1272 aaKnown RBP18.08■□□□□ 0.48
TREX1-201ENST00000433541 SMCHD1A6NHR9 2005 aa18.07■□□□□ 0.48
TREX1-201ENST00000433541 MYCP01106 439 aaPredicted RBP18.07■□□□□ 0.48
TREX1-201ENST00000433541 RXRAP19793 462 aa18.07■□□□□ 0.48
TREX1-201ENST00000433541 RPS6KB1P23443 525 aa18.07■□□□□ 0.48
TREX1-201ENST00000433541 RGS2P41220 211 aa18.07■□□□□ 0.48
TREX1-201ENST00000433541 EXOSC10Q01780 885 aaKnown RBP18.07■□□□□ 0.48
TREX1-201ENST00000433541 BTNL9Q6UXG8 535 aa18.07■□□□□ 0.48
TREX1-201ENST00000433541 NBPF11Q86T75 865 aa18.07■□□□□ 0.48
TREX1-201ENST00000433541 DPP9Q86TI2 863 aa18.07■□□□□ 0.48
TREX1-201ENST00000433541 STAG2Q8N3U4 1231 aa18.07■□□□□ 0.48
TREX1-201ENST00000433541 REPS2Q8NFH8 660 aa18.07■□□□□ 0.48
TREX1-201ENST00000433541 AGBL1Q96MI9 1066 aa18.07■□□□□ 0.48
TREX1-201ENST00000433541 UPF3BQ9BZI7 483 aaKnown RBP18.07■□□□□ 0.48
TREX1-201ENST00000433541 HPS5Q9UPZ3 1129 aa18.07■□□□□ 0.48
TREX1-201ENST00000433541 KLF18A0A0U1RQI7 1052 aa18.06■□□□□ 0.48
TREX1-201ENST00000433541 SLC15A5A6NIM6 579 aa18.06■□□□□ 0.48
TREX1-201ENST00000433541 STRNO43815 780 aa18.06■□□□□ 0.48
TREX1-201ENST00000433541 ADCY3O60266 1144 aa18.06■□□□□ 0.48
TREX1-201ENST00000433541 PTPREP23469 700 aa18.06■□□□□ 0.48
TREX1-201ENST00000433541 GRK4P32298 578 aa18.06■□□□□ 0.48
TREX1-201ENST00000433541 USH1GQ495M9 461 aa18.06■□□□□ 0.48
TREX1-201ENST00000433541 RUFY3Q7L099 469 aa18.06■□□□□ 0.48
TREX1-201ENST00000433541 HOMER1Q86YM7 354 aa18.06■□□□□ 0.48
TREX1-201ENST00000433541 ADGRF4Q8IZF3 695 aa18.06■□□□□ 0.48
TREX1-201ENST00000433541 SH3TC2Q8TF17 1288 aa18.06■□□□□ 0.48
TREX1-201ENST00000433541 BRF1Q92994 677 aa18.06■□□□□ 0.48
TREX1-201ENST00000433541 DDX11Q96FC9 970 aa18.06■□□□□ 0.48
TREX1-201ENST00000433541 ABHD8Q96I13 439 aa18.06■□□□□ 0.48
TREX1-201ENST00000433541 RNF146Q9NTX7 359 aa18.06■□□□□ 0.48
TREX1-201ENST00000433541 SLC5A4Q9NY91 659 aa18.06■□□□□ 0.48
TREX1-201ENST00000433541 FBXO40Q9UH90 709 aa18.06■□□□□ 0.48
TREX1-201ENST00000433541 MAD2L2Q9UI95 211 aa18.06■□□□□ 0.48
TREX1-201ENST00000433541 ATP2A1O14983 1001 aa18.05■□□□□ 0.48
TREX1-201ENST00000433541 ZBTB43O43298 467 aa18.05■□□□□ 0.48
TREX1-201ENST00000433541 ELNP15502 786 aa18.05■□□□□ 0.48
TREX1-201ENST00000433541 ADORA2AP29274 412 aa18.05■□□□□ 0.48
TREX1-201ENST00000433541 TROAPQ12815 778 aa18.05■□□□□ 0.48
TREX1-201ENST00000433541 MAP2K5Q13163 448 aa18.05■□□□□ 0.48
TREX1-201ENST00000433541 CDC37Q16543 378 aaPredicted RBP18.05■□□□□ 0.48
TREX1-201ENST00000433541 ANKRD35Q8N283 1001 aa18.05■□□□□ 0.48
TREX1-201ENST00000433541 SLAIN1Q8ND83 568 aa18.05■□□□□ 0.48
TREX1-201ENST00000433541 PIBF1Q8WXW3 757 aa18.05■□□□□ 0.48
TREX1-201ENST00000433541 TRERF1Q96PN7 1200 aa18.05■□□□□ 0.48
TREX1-201ENST00000433541 APBA2Q99767 749 aa18.05■□□□□ 0.48
TREX1-201ENST00000433541 RANBP17Q9H2T7 1088 aaKnown RBP18.05■□□□□ 0.48
TREX1-201ENST00000433541 RIPK3Q9Y572 518 aa18.05■□□□□ 0.48
TREX1-201ENST00000433541 ZNF236Q9UL36 1845 aa18.05■□□□□ 0.48
TREX1-201ENST00000433541 CCDC85CA6NKD9 419 aa18.04■□□□□ 0.48
TREX1-201ENST00000433541 GOLGA8AA7E2F4 631 aa18.04■□□□□ 0.48
TREX1-201ENST00000433541 GOLGA8BA8MQT2 603 aa18.04■□□□□ 0.48
TREX1-201ENST00000433541 ICAM1P05362 532 aa18.04■□□□□ 0.48
TREX1-201ENST00000433541 GNAQP50148 359 aa18.04■□□□□ 0.48
TREX1-201ENST00000433541 ANAPC15P60006 121 aa18.04■□□□□ 0.48
TREX1-201ENST00000433541 APOBRQ0VD83 1088 aa18.04■□□□□ 0.48
TREX1-201ENST00000433541 APOA5Q6Q788 366 aa18.04■□□□□ 0.48
TREX1-201ENST00000433541 SGMS1Q86VZ5 419 aa18.04■□□□□ 0.48
TREX1-201ENST00000433541 CHST13Q8NET6 341 aa18.04■□□□□ 0.48
TREX1-201ENST00000433541 ACAD9Q9H845 621 aa18.04■□□□□ 0.48
TREX1-201ENST00000433541 PNMA2Q9UL42 364 aa18.04■□□□□ 0.48
TREX1-201ENST00000433541 RBBP6Q7Z6E9 1792 aaKnown RBP18.04■□□□□ 0.48
TREX1-201ENST00000433541 PALM3A6NDB9 673 aaPredicted RBP18.03■□□□□ 0.48
TREX1-201ENST00000433541 UBXN2AP68543 259 aa18.03■□□□□ 0.48
TREX1-201ENST00000433541 IRF5Q13568 498 aa18.03■□□□□ 0.48
TREX1-201ENST00000433541 GRB14Q14449 540 aa18.03■□□□□ 0.48
TREX1-201ENST00000433541 TKFCQ3LXA3 575 aa18.03■□□□□ 0.48
TREX1-201ENST00000433541 MORN1Q5T089 497 aa18.03■□□□□ 0.48
TREX1-201ENST00000433541 NSMFQ6X4W1 530 aa18.03■□□□□ 0.48
TREX1-201ENST00000433541 TM6SF1Q9BZW5 370 aa18.03■□□□□ 0.48
TREX1-201ENST00000433541 ZSWIM6Q9HCJ5 1215 aa18.03■□□□□ 0.48
TREX1-201ENST00000433541 PDRG1Q9NUG6 133 aa18.03■□□□□ 0.48
TREX1-201ENST00000433541 SEC63Q9UGP8 760 aaKnown RBP18.03■□□□□ 0.48
TREX1-201ENST00000433541 ZNF536O15090 1300 aa18.02■□□□□ 0.48
TREX1-201ENST00000433541 CAPN15O75808 1086 aa18.02■□□□□ 0.48
TREX1-201ENST00000433541 PGK2P07205 417 aa18.02■□□□□ 0.48
TREX1-201ENST00000433541 TAL1P17542 331 aaPredicted RBP18.02■□□□□ 0.48
TREX1-201ENST00000433541 RTN1Q16799 776 aa18.02■□□□□ 0.48
TREX1-201ENST00000433541 QRICH1Q2TAL8 776 aa18.02■□□□□ 0.48
TREX1-201ENST00000433541 FBXO11Q86XK2 927 aa18.02■□□□□ 0.48
TREX1-201ENST00000433541 ABRAQ8N0Z2 381 aa18.02■□□□□ 0.48
TREX1-201ENST00000433541 CCDC82Q8N4S0 544 aa18.02■□□□□ 0.48
TREX1-201ENST00000433541 FANCBQ8NB91 859 aa18.02■□□□□ 0.48
TREX1-201ENST00000433541 MAP3K14Q99558 947 aa18.02■□□□□ 0.48
TREX1-201ENST00000433541 JMJD4Q9H9V9 463 aa18.02■□□□□ 0.48
TREX1-201ENST00000433541 GJD2Q9UKL4 321 aa18.02■□□□□ 0.48
TREX1-201ENST00000433541 BRPF3Q9ULD4 1205 aa18.02■□□□□ 0.48
TREX1-201ENST00000433541 METAP2P50579 478 aaKnown RBP eCLIP18.01■□□□□ 0.47
TREX1-201ENST00000433541 TRMT44Q8IYL2 757 aaKnown RBP18.01■□□□□ 0.47
TREX1-201ENST00000433541 RRP36Q96EU6 259 aaKnown RBP18.01■□□□□ 0.47
TREX1-201ENST00000433541 LZTS2Q9BRK4 669 aa18.01■□□□□ 0.47
TREX1-201ENST00000433541 RBM28Q9NW13 759 aaKnown RBP18.01■□□□□ 0.47
TREX1-201ENST00000433541 PTPDC1A2A3K4 754 aa18■□□□□ 0.47
TREX1-201ENST00000433541 ZBTB5O15062 677 aa18■□□□□ 0.47
TREX1-201ENST00000433541 PLEKHA8P1O95397 391 aa18■□□□□ 0.47
TREX1-201ENST00000433541 HMGCRP04035 888 aa18■□□□□ 0.47
TREX1-201ENST00000433541 INHAP05111 366 aa18■□□□□ 0.47
TREX1-201ENST00000433541 XRCC5P13010 732 aaKnown RBP18■□□□□ 0.47
TREX1-201ENST00000433541 MUM1L1Q5H9M0 696 aa18■□□□□ 0.47
TREX1-201ENST00000433541 CMTR1Q8N1G2 835 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms