RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 HMGCRP04035 888 aa20.41■□□□□ 0.86
CTSD-203ENST00000429746 HSPA4P34932 840 aa20.41■□□□□ 0.86
CTSD-203ENST00000429746 WDR78Q5VTH9 848 aa20.41■□□□□ 0.86
CTSD-203ENST00000429746 RALYLQ86SE5 291 aaKnown RBP20.41■□□□□ 0.86
CTSD-203ENST00000429746 STAG2Q8N3U4 1231 aa20.41■□□□□ 0.86
CTSD-203ENST00000429746 PAK6Q9NQU5 681 aaPredicted RBP20.41■□□□□ 0.86
CTSD-203ENST00000429746 MAD2L2Q9UI95 211 aa20.41■□□□□ 0.86
CTSD-203ENST00000429746 IFIT3O14879 490 aaKnown RBP20.4■□□□□ 0.86
CTSD-203ENST00000429746 PRC1O43663 620 aa20.4■□□□□ 0.86
CTSD-203ENST00000429746 SLC34A2O95436 690 aa20.4■□□□□ 0.86
CTSD-203ENST00000429746 EXOSC10Q01780 885 aaKnown RBP20.4■□□□□ 0.86
CTSD-203ENST00000429746 ZNF792Q3KQV3 632 aa20.4■□□□□ 0.86
CTSD-203ENST00000429746 GPATCH4Q5T3I0 446 aaKnown RBP20.4■□□□□ 0.86
CTSD-203ENST00000429746 MTA3Q9BTC8 594 aa20.4■□□□□ 0.86
CTSD-203ENST00000429746 BAZ2BQ9UIF8 2168 aaKnown RBP20.39■□□□□ 0.86
CTSD-203ENST00000429746 PALM3A6NDB9 673 aaPredicted RBP20.39■□□□□ 0.85
CTSD-203ENST00000429746 SGPL1O95470 568 aa20.39■□□□□ 0.85
CTSD-203ENST00000429746 COPB2P35606 906 aa20.39■□□□□ 0.85
CTSD-203ENST00000429746 CACNB2Q08289 660 aaPredicted RBP20.39■□□□□ 0.85
CTSD-203ENST00000429746 CCAR1Q8IX12 1150 aaKnown RBP20.39■□□□□ 0.85
CTSD-203ENST00000429746 TRMT44Q8IYL2 757 aaKnown RBP20.39■□□□□ 0.85
CTSD-203ENST00000429746 UBA5Q9GZZ9 404 aa20.39■□□□□ 0.85
CTSD-203ENST00000429746 SNX14Q9Y5W7 946 aa20.39■□□□□ 0.85
CTSD-203ENST00000429746 IVNS1ABPQ9Y6Y0 642 aa20.39■□□□□ 0.85
CTSD-203ENST00000429746 MCM3APO60318 1980 aa20.39■□□□□ 0.85
CTSD-203ENST00000429746 MYH6P13533 1939 aa20.39■□□□□ 0.85
CTSD-203ENST00000429746 ICAM1P05362 532 aa20.38■□□□□ 0.85
CTSD-203ENST00000429746 PGK2P07205 417 aa20.38■□□□□ 0.85
CTSD-203ENST00000429746 FCER1AP12319 257 aa20.38■□□□□ 0.85
CTSD-203ENST00000429746 GRM4Q14833 912 aa20.38■□□□□ 0.85
CTSD-203ENST00000429746 WTAPQ15007 396 aa20.38■□□□□ 0.85
CTSD-203ENST00000429746 ASPRV1Q53RT3 343 aa20.38■□□□□ 0.85
CTSD-203ENST00000429746 MUM1L1Q5H9M0 696 aa20.38■□□□□ 0.85
CTSD-203ENST00000429746 TMEM67Q5HYA8 995 aa20.38■□□□□ 0.85
CTSD-203ENST00000429746 OLFML2BQ68BL8 750 aa20.38■□□□□ 0.85
CTSD-203ENST00000429746 CCDC174Q6PII3 467 aa20.38■□□□□ 0.85
CTSD-203ENST00000429746 TRPV1Q8NER1 839 aa20.38■□□□□ 0.85
CTSD-203ENST00000429746 U2AF1L4Q8WU68 220 aaKnown RBP20.38■□□□□ 0.85
CTSD-203ENST00000429746 MTMR8Q96EF0 704 aa20.38■□□□□ 0.85
CTSD-203ENST00000429746 MAML3Q96JK9 1138 aa20.38■□□□□ 0.85
CTSD-203ENST00000429746 MMP19Q99542 508 aa20.38■□□□□ 0.85
CTSD-203ENST00000429746 ASTN1O14525 1302 aa20.37■□□□□ 0.85
CTSD-203ENST00000429746 LRRC37A2A6NM11 1700 aa20.37■□□□□ 0.85
CTSD-203ENST00000429746 EPB41L2O43491 1005 aaKnown RBP20.37■□□□□ 0.85
CTSD-203ENST00000429746 ZKSCAN1P17029 563 aaPredicted RBP20.37■□□□□ 0.85
CTSD-203ENST00000429746 MCM5P33992 734 aa20.37■□□□□ 0.85
CTSD-203ENST00000429746 IKQ13123 557 aaPredicted RBP20.37■□□□□ 0.85
CTSD-203ENST00000429746 UBE2Q1Q7Z7E8 422 aa20.37■□□□□ 0.85
CTSD-203ENST00000429746 CHST13Q8NET6 341 aa20.37■□□□□ 0.85
CTSD-203ENST00000429746 USP26Q9BXU7 913 aa20.37■□□□□ 0.85
CTSD-203ENST00000429746 LRRC2Q9BYS8 371 aa20.37■□□□□ 0.85
CTSD-203ENST00000429746 JMJD4Q9H9V9 463 aa20.37■□□□□ 0.85
CTSD-203ENST00000429746 ISY1Q9ULR0 285 aaKnown RBP20.37■□□□□ 0.85
CTSD-203ENST00000429746 WDR19Q8NEZ3 1342 aa20.36■□□□□ 0.85
CTSD-203ENST00000429746 CYTH3O43739 400 aa20.36■□□□□ 0.85
CTSD-203ENST00000429746 PRKAR2AP13861 404 aaKnown RBP20.36■□□□□ 0.85
CTSD-203ENST00000429746 ADGRF4Q8IZF3 695 aa20.36■□□□□ 0.85
CTSD-203ENST00000429746 CLEC4DQ8WXI8 215 aa20.36■□□□□ 0.85
CTSD-203ENST00000429746 NEK1Q96PY6 1258 aa20.36■□□□□ 0.85
CTSD-203ENST00000429746 HTATIP2Q9BUP3 242 aa20.36■□□□□ 0.85
CTSD-203ENST00000429746 CRISPLD2Q9H0B8 497 aa20.36■□□□□ 0.85
CTSD-203ENST00000429746 A1CFQ9NQ94 594 aaKnown RBP20.36■□□□□ 0.85
CTSD-203ENST00000429746 RNF146Q9NTX7 359 aa20.36■□□□□ 0.85
CTSD-203ENST00000429746 RPTORQ8N122 1335 aa20.35■□□□□ 0.85
CTSD-203ENST00000429746 PARP1P09874 1014 aaKnown RBP20.35■□□□□ 0.85
CTSD-203ENST00000429746 CCND3P30281 292 aaPredicted RBP20.35■□□□□ 0.85
CTSD-203ENST00000429746 CYP2C19P33261 490 aa20.35■□□□□ 0.85
CTSD-203ENST00000429746 LIFRP42702 1097 aa20.35■□□□□ 0.85
CTSD-203ENST00000429746 RNF20Q5VTR2 975 aa20.35■□□□□ 0.85
CTSD-203ENST00000429746 SGMS1Q86VZ5 419 aa20.35■□□□□ 0.85
CTSD-203ENST00000429746 TMEM87BQ96K49 555 aa20.35■□□□□ 0.85
CTSD-203ENST00000429746 TCEANC2Q96MN5 208 aa20.35■□□□□ 0.85
CTSD-203ENST00000429746 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.35■□□□□ 0.853e-9■■■■□ 20.4
CTSD-203ENST00000429746 CWC22Q9HCG8 908 aaKnown RBP20.35■□□□□ 0.85
CTSD-203ENST00000429746 HOMER2Q9NSB8 354 aa20.35■□□□□ 0.85
CTSD-203ENST00000429746 DIS3Q9Y2L1 958 aaKnown RBP20.35■□□□□ 0.85
CTSD-203ENST00000429746 PPP1R11O60927 126 aaPredicted RBP20.34■□□□□ 0.85
CTSD-203ENST00000429746 REC8O95072 547 aa20.34■□□□□ 0.85
CTSD-203ENST00000429746 CYBAP13498 195 aa20.34■□□□□ 0.85
CTSD-203ENST00000429746 CPA1P15085 419 aa20.34■□□□□ 0.85
CTSD-203ENST00000429746 MNX1P50219 401 aaPredicted RBP20.34■□□□□ 0.85
CTSD-203ENST00000429746 KCTD2Q14681 263 aa20.34■□□□□ 0.85
CTSD-203ENST00000429746 TKFCQ3LXA3 575 aa20.34■□□□□ 0.85
CTSD-203ENST00000429746 DPP9Q86TI2 863 aa20.34■□□□□ 0.85
CTSD-203ENST00000429746 ZNF654Q8IZM8 581 aa20.34■□□□□ 0.85
CTSD-203ENST00000429746 FAM133AQ8N9E0 248 aa20.34■□□□□ 0.85
CTSD-203ENST00000429746 TRERF1Q96PN7 1200 aa20.34■□□□□ 0.85
CTSD-203ENST00000429746 MYL10Q9BUA6 226 aa20.34■□□□□ 0.85
CTSD-203ENST00000429746 ACAD9Q9H845 621 aa20.34■□□□□ 0.85
CTSD-203ENST00000429746 CCPG1Q9ULG6 757 aa20.34■□□□□ 0.85
CTSD-203ENST00000429746 KLRF2D3W0D1 207 aa20.33■□□□□ 0.85
CTSD-203ENST00000429746 NFIBO00712 420 aa20.33■□□□□ 0.85
CTSD-203ENST00000429746 ALAS1P13196 640 aa20.33■□□□□ 0.85
CTSD-203ENST00000429746 CDC37Q16543 378 aaPredicted RBP20.33■□□□□ 0.85
CTSD-203ENST00000429746 LHX8Q68G74 356 aa20.33■□□□□ 0.85
CTSD-203ENST00000429746 DHX32Q7L7V1 743 aaKnown RBP20.33■□□□□ 0.85
CTSD-203ENST00000429746 MAP3K14Q99558 947 aa20.33■□□□□ 0.85
CTSD-203ENST00000429746 RIOX1Q9H6W3 641 aa20.33■□□□□ 0.85
CTSD-203ENST00000429746 HMX1Q9NP08 348 aaPredicted RBP20.33■□□□□ 0.85
CTSD-203ENST00000429746 FBXO40Q9UH90 709 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms