RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 PSMD1Q99460 953 aa11.81□□□□□ -0.52
HDAC9-210ENST00000428307 PLIN2Q99541 437 aa11.81□□□□□ -0.52
HDAC9-210ENST00000428307 BLZF1Q9H2G9 400 aa11.81□□□□□ -0.52
HDAC9-210ENST00000428307 C10orf71Q711Q0 1435 aa11.81□□□□□ -0.52
HDAC9-210ENST00000428307 PNMA6FA0A0J9YX94 578 aa11.81□□□□□ -0.52
HDAC9-210ENST00000428307 CDC25BP30305 580 aa11.81□□□□□ -0.52
HDAC9-210ENST00000428307 LONP1P36776 959 aaKnown RBP11.81□□□□□ -0.52
HDAC9-210ENST00000428307 ICA1Q05084 483 aa11.81□□□□□ -0.52
HDAC9-210ENST00000428307 FMR1Q06787 632 aaKnown RBP eCLIP11.81□□□□□ -0.52
HDAC9-210ENST00000428307 E2F4Q16254 413 aa11.81□□□□□ -0.52
HDAC9-210ENST00000428307 ABCB5Q2M3G0 1257 aa11.81□□□□□ -0.52
HDAC9-210ENST00000428307 SH3RF1Q7Z6J0 888 aa11.81□□□□□ -0.52
HDAC9-210ENST00000428307 NEK8Q86SG6 692 aa11.81□□□□□ -0.52
HDAC9-210ENST00000428307 TRMT44Q8IYL2 757 aaKnown RBP11.81□□□□□ -0.52
HDAC9-210ENST00000428307 RASSF8Q8NHQ8 419 aa11.81□□□□□ -0.52
HDAC9-210ENST00000428307 SLC16A10Q8TF71 515 aa11.81□□□□□ -0.52
HDAC9-210ENST00000428307 QSER1Q2KHR3 1735 aa11.8□□□□□ -0.52
HDAC9-210ENST00000428307 SPDYE2BA6NHP3 402 aa11.8□□□□□ -0.52
HDAC9-210ENST00000428307 GH2P01242 217 aa11.8□□□□□ -0.52
HDAC9-210ENST00000428307 VIL1P09327 827 aaKnown RBP11.8□□□□□ -0.52
HDAC9-210ENST00000428307 SPDYE6P0CI01 402 aa11.8□□□□□ -0.52
HDAC9-210ENST00000428307 FANCCQ00597 558 aa11.8□□□□□ -0.52
HDAC9-210ENST00000428307 RRP1BQ14684 758 aaKnown RBP11.8□□□□□ -0.52
HDAC9-210ENST00000428307 DLGAP5Q15398 846 aa11.8□□□□□ -0.52
HDAC9-210ENST00000428307 SLFN13Q68D06 897 aa11.8□□□□□ -0.52
HDAC9-210ENST00000428307 SMYD4Q8IYR2 804 aaPredicted RBP11.8□□□□□ -0.52
HDAC9-210ENST00000428307 MLKLQ8NB16 471 aa11.8□□□□□ -0.52
HDAC9-210ENST00000428307 KIAA1524Q8TCG1 905 aa11.8□□□□□ -0.52
HDAC9-210ENST00000428307 RGPD3A6NKT7 1758 aaPredicted RBP11.8□□□□□ -0.52
HDAC9-210ENST00000428307 RGPD4Q7Z3J3 1758 aa11.8□□□□□ -0.52
HDAC9-210ENST00000428307 F5H6K3 240 aa11.79□□□□□ -0.52
HDAC9-210ENST00000428307 ENTPD3O75355 529 aa11.79□□□□□ -0.52
HDAC9-210ENST00000428307 NPM3O75607 178 aaKnown RBP11.79□□□□□ -0.52
HDAC9-210ENST00000428307 SERPINC1P01008 464 aa11.79□□□□□ -0.52
HDAC9-210ENST00000428307 TXLNAP40222 546 aa11.79□□□□□ -0.52
HDAC9-210ENST00000428307 UBA7P41226 1012 aa11.79□□□□□ -0.52
HDAC9-210ENST00000428307 ADCY7P51828 1080 aa11.79□□□□□ -0.52
HDAC9-210ENST00000428307 KLRC3Q07444 240 aa11.79□□□□□ -0.52
HDAC9-210ENST00000428307 DPYDQ12882 1025 aa11.79□□□□□ -0.52
HDAC9-210ENST00000428307 DNTTIP2Q5QJE6 756 aaKnown RBP11.79□□□□□ -0.52
HDAC9-210ENST00000428307 KLHL10Q6JEL2 608 aa11.79□□□□□ -0.52
HDAC9-210ENST00000428307 FAM177A1Q8N128 213 aaPredicted RBP11.79□□□□□ -0.52
HDAC9-210ENST00000428307 NUP88Q99567 741 aaPredicted RBP11.79□□□□□ -0.52
HDAC9-210ENST00000428307 MTRQ99707 1265 aa11.79□□□□□ -0.52
HDAC9-210ENST00000428307 VEZTQ9HBM0 779 aa11.79□□□□□ -0.52
HDAC9-210ENST00000428307 TMOD2Q9NZR1 351 aa11.79□□□□□ -0.52
HDAC9-210ENST00000428307 NYAP2Q9P242 653 aa11.79□□□□□ -0.52
HDAC9-210ENST00000428307 ZBTB5O15062 677 aa11.79□□□□□ -0.52
HDAC9-210ENST00000428307 UBE2SQ16763 222 aa11.79□□□□□ -0.52
HDAC9-210ENST00000428307 PTPN21Q16825 1174 aa11.79□□□□□ -0.52
HDAC9-210ENST00000428307 GRIPAP1Q4V328 841 aa11.79□□□□□ -0.52
HDAC9-210ENST00000428307 TMEM179Q6ZVK1 233 aa11.79□□□□□ -0.52
HDAC9-210ENST00000428307 TRIML1Q8N9V2 468 aa11.79□□□□□ -0.52
HDAC9-210ENST00000428307 MKL1Q969V6 931 aa11.79□□□□□ -0.52
HDAC9-210ENST00000428307 MED15Q96RN5 788 aa11.79□□□□□ -0.52
HDAC9-210ENST00000428307 NFE2L3Q9Y4A8 694 aa11.79□□□□□ -0.52
HDAC9-210ENST00000428307 FOCADQ5VW36 1801 aa11.78□□□□□ -0.52
HDAC9-210ENST00000428307 ESYT2A0FGR8 921 aa11.78□□□□□ -0.52
HDAC9-210ENST00000428307 hCG_1984214I3L0E3 225 aa11.78□□□□□ -0.52
HDAC9-210ENST00000428307 NEMFO60524 1076 aa11.78□□□□□ -0.52
HDAC9-210ENST00000428307 STAT6P42226 847 aa11.78□□□□□ -0.52
HDAC9-210ENST00000428307 TNNI2P48788 182 aa11.78□□□□□ -0.52
HDAC9-210ENST00000428307 UBASH3AP57075 661 aa11.78□□□□□ -0.52
HDAC9-210ENST00000428307 SNAP25P60880 206 aa11.78□□□□□ -0.52
HDAC9-210ENST00000428307 CUL4BQ13620 913 aa11.78□□□□□ -0.52
HDAC9-210ENST00000428307 PPP4R3BQ5MIZ7 849 aa11.78□□□□□ -0.52
HDAC9-210ENST00000428307 RBM26Q5T8P6 1007 aaKnown RBP11.78□□□□□ -0.52
HDAC9-210ENST00000428307 PDXDC2PQ6P474 469 aa11.78□□□□□ -0.52
HDAC9-210ENST00000428307 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.78□□□□□ -0.52
HDAC9-210ENST00000428307 LRRC8AQ8IWT6 810 aa11.78□□□□□ -0.52
HDAC9-210ENST00000428307 ZNF713Q8N859 430 aaPredicted RBP11.78□□□□□ -0.52
HDAC9-210ENST00000428307 DPF2Q92785 391 aa11.78□□□□□ -0.52
HDAC9-210ENST00000428307 GMLQ99445 158 aa11.78□□□□□ -0.52
HDAC9-210ENST00000428307 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.78□□□□□ -0.52
HDAC9-210ENST00000428307 PIM2Q9P1W9 311 aa11.78□□□□□ -0.52
HDAC9-210ENST00000428307 ZNF70Q9UC06 446 aaPredicted RBP11.78□□□□□ -0.52
HDAC9-210ENST00000428307 HDAC9Q9UKV0 1011 aa11.78□□□□□ -0.52
HDAC9-210ENST00000428307 ZNRF3Q9ULT6 936 aa11.78□□□□□ -0.52
HDAC9-210ENST00000428307 SCAF8Q9UPN6 1271 aaKnown RBP11.78□□□□□ -0.52
HDAC9-210ENST00000428307 OR52Z1P0C646 297 aa11.78□□□□□ -0.52
HDAC9-210ENST00000428307 TECP42680 631 aa11.78□□□□□ -0.52
HDAC9-210ENST00000428307 STX17P56962 302 aa11.78□□□□□ -0.52
HDAC9-210ENST00000428307 IKQ13123 557 aaPredicted RBP11.78□□□□□ -0.52
HDAC9-210ENST00000428307 TMC6Q7Z403 805 aa11.78□□□□□ -0.52
HDAC9-210ENST00000428307 CDAN1Q8IWY9 1227 aa11.78□□□□□ -0.52
HDAC9-210ENST00000428307 NIM1KQ8IY84 436 aa11.78□□□□□ -0.52
HDAC9-210ENST00000428307 SPICE1Q8N0Z3 855 aa11.78□□□□□ -0.52
HDAC9-210ENST00000428307 GSDMAQ96QA5 445 aa11.78□□□□□ -0.52
HDAC9-210ENST00000428307 DISC1Q9NRI5 854 aa11.78□□□□□ -0.52
HDAC9-210ENST00000428307 DACH1Q9UI36 760 aa11.78□□□□□ -0.52
HDAC9-210ENST00000428307 R3HCC1Q9Y3T6 440 aaKnown RBP11.78□□□□□ -0.52
HDAC9-210ENST00000428307 SRCAPQ6ZRS2 3230 aa11.78□□□□□ -0.52
HDAC9-210ENST00000428307 LAD1O00515 517 aa11.77□□□□□ -0.52
HDAC9-210ENST00000428307 COBLO75128 1261 aa11.77□□□□□ -0.52
HDAC9-210ENST00000428307 CD44P16070 742 aaKnown RBP11.77□□□□□ -0.52
HDAC9-210ENST00000428307 CDK11BP21127 795 aaKnown RBP11.77□□□□□ -0.52
HDAC9-210ENST00000428307 TXKP42681 527 aa11.77□□□□□ -0.52
HDAC9-210ENST00000428307 QRICH1Q2TAL8 776 aa11.77□□□□□ -0.52
HDAC9-210ENST00000428307 RRAGBQ5VZM2 374 aa11.77□□□□□ -0.52
HDAC9-210ENST00000428307 PSTPIP2Q9H939 334 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms