RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 PRR12Q9ULL5 1215 aa21.71■■□□□ 1.07
PSPC1-202ENST00000427943 ZNF536O15090 1300 aa21.71■■□□□ 1.07
PSPC1-202ENST00000427943 FRMPD2Q68DX3 1309 aaPredicted RBP21.71■■□□□ 1.07
PSPC1-202ENST00000427943 ZNF213O14771 459 aa21.7■■□□□ 1.06
PSPC1-202ENST00000427943 PLA2G6O60733 806 aa21.7■■□□□ 1.06
PSPC1-202ENST00000427943 TOP1P11387 765 aaKnown RBP21.7■■□□□ 1.06
PSPC1-202ENST00000427943 TTC22Q5TAA0 569 aa21.7■■□□□ 1.06
PSPC1-202ENST00000427943 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.7■■□□□ 1.06
PSPC1-202ENST00000427943 DCAF4Q8WV16 495 aa21.7■■□□□ 1.06
PSPC1-202ENST00000427943 FGD4Q96M96 766 aa21.7■■□□□ 1.06
PSPC1-202ENST00000427943 ACAD9Q9H845 621 aa21.7■■□□□ 1.06
PSPC1-202ENST00000427943 TCP11L1Q9NUJ3 509 aa21.7■■□□□ 1.06
PSPC1-202ENST00000427943 NRBP1Q9UHY1 535 aa21.7■■□□□ 1.06
PSPC1-202ENST00000427943 CNPY2Q9Y2B0 182 aa21.7■■□□□ 1.06
PSPC1-202ENST00000427943 MYH6P13533 1939 aa21.69■■□□□ 1.06
PSPC1-202ENST00000427943 ZNF865P0CJ78 1059 aaPredicted RBP21.69■■□□□ 1.06
PSPC1-202ENST00000427943 RARBP10826 455 aa21.69■■□□□ 1.06
PSPC1-202ENST00000427943 PCP11498 1178 aaKnown RBP21.69■■□□□ 1.06
PSPC1-202ENST00000427943 ALAS1P13196 640 aa21.69■■□□□ 1.06
PSPC1-202ENST00000427943 SLC16A2P36021 539 aa21.69■■□□□ 1.06
PSPC1-202ENST00000427943 LRRC41Q15345 812 aa21.69■■□□□ 1.06
PSPC1-202ENST00000427943 TTBK2Q6IQ55 1244 aa21.69■■□□□ 1.06
PSPC1-202ENST00000427943 GDF15Q99988 308 aa21.69■■□□□ 1.06
PSPC1-202ENST00000427943 ZKSCAN3Q9BRR0 538 aa21.69■■□□□ 1.06
PSPC1-202ENST00000427943 IL25Q9H293 177 aa21.69■■□□□ 1.06
PSPC1-202ENST00000427943 RNF41Q9H4P4 317 aaPredicted RBP21.69■■□□□ 1.06
PSPC1-202ENST00000427943 XPNPEP3Q9NQH7 507 aa21.69■■□□□ 1.06
PSPC1-202ENST00000427943 ZHX1Q9UKY1 873 aaPredicted RBP21.69■■□□□ 1.06
PSPC1-202ENST00000427943 SYNGAP1Q96PV0 1343 aa21.69■■□□□ 1.06
PSPC1-202ENST00000427943 SNAI1O95863 264 aaPredicted RBP21.68■■□□□ 1.06
PSPC1-202ENST00000427943 AKR1A1P14550 325 aa21.68■■□□□ 1.06
PSPC1-202ENST00000427943 MAGEA10P43363 369 aaPredicted RBP21.68■■□□□ 1.06
PSPC1-202ENST00000427943 ESR2Q92731 530 aa21.68■■□□□ 1.06
PSPC1-202ENST00000427943 GPCPD1Q9NPB8 672 aa21.68■■□□□ 1.06
PSPC1-202ENST00000427943 A1CFQ9NQ94 594 aaKnown RBP21.68■■□□□ 1.06
PSPC1-202ENST00000427943 PGK1P00558 417 aa21.67■■□□□ 1.06
PSPC1-202ENST00000427943 CNTN2Q02246 1040 aa21.67■■□□□ 1.06
PSPC1-202ENST00000427943 MAMDC4Q6UXC1 1216 aa21.67■■□□□ 1.06
PSPC1-202ENST00000427943 ZNF467Q7Z7K2 595 aaPredicted RBP21.67■■□□□ 1.06
PSPC1-202ENST00000427943 MSL3Q8N5Y2 521 aaKnown RBP21.67■■□□□ 1.06
PSPC1-202ENST00000427943 FERMT2Q96AC1 680 aa21.67■■□□□ 1.06
PSPC1-202ENST00000427943 DSCC1Q9BVC3 393 aa21.67■■□□□ 1.06
PSPC1-202ENST00000427943 PDHBP11177 359 aa21.66■■□□□ 1.06
PSPC1-202ENST00000427943 ADCYAP1R1P41586 468 aa21.66■■□□□ 1.06
PSPC1-202ENST00000427943 RTP1P59025 263 aa21.66■■□□□ 1.06
PSPC1-202ENST00000427943 MUM1L1Q5H9M0 696 aa21.66■■□□□ 1.06
PSPC1-202ENST00000427943 TRERF1Q96PN7 1200 aa21.66■■□□□ 1.06
PSPC1-202ENST00000427943 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.66■■□□□ 1.06
PSPC1-202ENST00000427943 CCPG1Q9ULG6 757 aa21.66■■□□□ 1.06
PSPC1-202ENST00000427943 ATP11BQ9Y2G3 1177 aa21.66■■□□□ 1.06
PSPC1-202ENST00000427943 POTEB2H3BUK9 544 aa21.65■■□□□ 1.06
PSPC1-202ENST00000427943 KDM4AO75164 1064 aa21.65■■□□□ 1.06
PSPC1-202ENST00000427943 TKFCQ3LXA3 575 aa21.65■■□□□ 1.06
PSPC1-202ENST00000427943 SYDE2Q5VT97 1194 aa21.65■■□□□ 1.06
PSPC1-202ENST00000427943 ARMCX2Q7L311 632 aa21.65■■□□□ 1.06
PSPC1-202ENST00000427943 RANBP17Q9H2T7 1088 aaKnown RBP21.65■■□□□ 1.06
PSPC1-202ENST00000427943 SYNRGQ9UMZ2 1314 aa21.64■■□□□ 1.05
PSPC1-202ENST00000427943 A0A1W2PPC1 479 aa21.64■■□□□ 1.05
PSPC1-202ENST00000427943 B4E1Z4 1266 aa21.64■■□□□ 1.05
PSPC1-202ENST00000427943 IMMTQ16891 758 aaKnown RBP21.64■■□□□ 1.05
PSPC1-202ENST00000427943 BTNL9Q6UXG8 535 aa21.64■■□□□ 1.05
PSPC1-202ENST00000427943 SLC39A5Q6ZMH5 540 aa21.64■■□□□ 1.05
PSPC1-202ENST00000427943 RNF180Q86T96 592 aa21.64■■□□□ 1.05
PSPC1-202ENST00000427943 FAM133AQ8N9E0 248 aa21.64■■□□□ 1.05
PSPC1-202ENST00000427943 TTC14Q96N46 770 aa21.64■■□□□ 1.05
PSPC1-202ENST00000427943 FAM184BQ9ULE4 1060 aa21.64■■□□□ 1.05
PSPC1-202ENST00000427943 ICAM1P05362 532 aa21.63■■□□□ 1.05
PSPC1-202ENST00000427943 BMP8BP34820 402 aa21.63■■□□□ 1.05
PSPC1-202ENST00000427943 MDM2Q00987 491 aaPredicted RBP21.63■■□□□ 1.05
PSPC1-202ENST00000427943 ZNF543Q08ER8 600 aa21.63■■□□□ 1.05
PSPC1-202ENST00000427943 ACVR2BQ13705 512 aa21.63■■□□□ 1.05
PSPC1-202ENST00000427943 CCDC144CPQ8IYA2 1237 aa21.63■■□□□ 1.05
PSPC1-202ENST00000427943 SOWAHBA6NEL2 793 aa21.62■■□□□ 1.05
PSPC1-202ENST00000427943 ADCY6O43306 1168 aa21.62■■□□□ 1.05
PSPC1-202ENST00000427943 ADAMTS4O75173 837 aa21.62■■□□□ 1.05
PSPC1-202ENST00000427943 TRIM60Q495X7 471 aa21.62■■□□□ 1.05
PSPC1-202ENST00000427943 NSMFQ6X4W1 530 aa21.62■■□□□ 1.05
PSPC1-202ENST00000427943 CTNNA3Q9UI47 895 aa21.62■■□□□ 1.05
PSPC1-202ENST00000427943 PHF24Q9UPV7 400 aa21.62■■□□□ 1.05
PSPC1-202ENST00000427943 DDX49Q9Y6V7 483 aaKnown RBP21.62■■□□□ 1.05
PSPC1-202ENST00000427943 ASTN1O14525 1302 aa21.61■■□□□ 1.05
PSPC1-202ENST00000427943 RAD50Q92878 1312 aa21.61■■□□□ 1.05
PSPC1-202ENST00000427943 SOX1O00570 391 aaPredicted RBP21.61■■□□□ 1.05
PSPC1-202ENST00000427943 GOLGA8HP0CJ92 632 aa21.61■■□□□ 1.05
PSPC1-202ENST00000427943 SNHG28P0DPA3 235 aa21.61■■□□□ 1.05
PSPC1-202ENST00000427943 CCDC144BQ3MJ40 725 aa21.61■■□□□ 1.05
PSPC1-202ENST00000427943 IQCA1Q86XH1 822 aa21.61■■□□□ 1.05
PSPC1-202ENST00000427943 UBE2OQ9C0C9 1292 aaKnown RBP21.61■■□□□ 1.05
PSPC1-202ENST00000427943 ABHD16BQ9H3Z7 469 aa21.61■■□□□ 1.05
PSPC1-202ENST00000427943 CYP39A1Q9NYL5 469 aa21.61■■□□□ 1.05
PSPC1-202ENST00000427943 SZT2Q5T011 3432 aa21.61■■□□□ 1.05
PSPC1-202ENST00000427943 A0A1W2PQ45 241 aaPredicted RBP21.6■■□□□ 1.05
PSPC1-202ENST00000427943 A0A1W2PQY0 241 aa21.6■■□□□ 1.05
PSPC1-202ENST00000427943 MYADML2A6NDP7 307 aa21.6■■□□□ 1.05
PSPC1-202ENST00000427943 IRX5P78411 483 aaPredicted RBP21.6■■□□□ 1.05
PSPC1-202ENST00000427943 SNX17Q15036 470 aa21.6■■□□□ 1.05
PSPC1-202ENST00000427943 DGKHQ86XP1 1220 aa21.6■■□□□ 1.05
PSPC1-202ENST00000427943 PNMA1Q8ND90 353 aa21.6■■□□□ 1.05
PSPC1-202ENST00000427943 PURBQ96QR8 312 aaKnown RBP21.6■■□□□ 1.05
PSPC1-202ENST00000427943 KATNBL1Q9H079 304 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms