RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 ZSWIM5Q9P217 1185 aa24.26■■□□□ 1.47
HSPG2-205ENST00000427897 U3KPZ7 1027 aaPredicted RBP24.26■■□□□ 1.47
HSPG2-205ENST00000427897 LAMA4Q16363 1823 aa24.26■■□□□ 1.47
HSPG2-205ENST00000427897 PLXNA1Q9UIW2 1896 aa24.26■■□□□ 1.47
HSPG2-205ENST00000427897 MKI67P46013 3256 aaKnown RBP24.25■■□□□ 1.47
HSPG2-205ENST00000427897 SYDE2Q5VT97 1194 aa24.25■■□□□ 1.47
HSPG2-205ENST00000427897 TTBK2Q6IQ55 1244 aa24.25■■□□□ 1.47
HSPG2-205ENST00000427897 RASGRP2Q7LDG7 609 aa24.25■■□□□ 1.47
HSPG2-205ENST00000427897 TRERF1Q96PN7 1200 aa24.25■■□□□ 1.47
HSPG2-205ENST00000427897 ZSCAN10Q96SZ4 725 aaPredicted RBP24.25■■□□□ 1.47
HSPG2-205ENST00000427897 RNF146Q9NTX7 359 aa24.25■■□□□ 1.47
HSPG2-205ENST00000427897 CCPG1Q9ULG6 757 aa24.25■■□□□ 1.47
HSPG2-205ENST00000427897 PDHBP11177 359 aa24.24■■□□□ 1.47
HSPG2-205ENST00000427897 IL25Q9H293 177 aa24.24■■□□□ 1.47
HSPG2-205ENST00000427897 NRBP1Q9UHY1 535 aa24.24■■□□□ 1.47
HSPG2-205ENST00000427897 KBTBD13C9JR72 458 aa24.23■■□□□ 1.47
HSPG2-205ENST00000427897 POTEB2H3BUK9 544 aa24.23■■□□□ 1.47
HSPG2-205ENST00000427897 MSL3Q8N5Y2 521 aaKnown RBP24.23■■□□□ 1.47
HSPG2-205ENST00000427897 PNMA1Q8ND90 353 aa24.23■■□□□ 1.47
HSPG2-205ENST00000427897 SENP6Q9GZR1 1112 aaPredicted RBP24.23■■□□□ 1.47
HSPG2-205ENST00000427897 RARBP10826 455 aa24.22■■□□□ 1.47
HSPG2-205ENST00000427897 PTH1RQ03431 593 aa24.22■■□□□ 1.47
HSPG2-205ENST00000427897 GPATCH4Q5T3I0 446 aaKnown RBP24.22■■□□□ 1.47
HSPG2-205ENST00000427897 BTNL9Q6UXG8 535 aa24.22■■□□□ 1.47
HSPG2-205ENST00000427897 C7orf61Q8IZ16 206 aa24.22■■□□□ 1.47
HSPG2-205ENST00000427897 CCDC136Q96JN2 1154 aa24.22■■□□□ 1.47
HSPG2-205ENST00000427897 DNAJC25-GNG10A0A024R161 153 aa24.21■■□□□ 1.47
HSPG2-205ENST00000427897 SGSM2O43147 1006 aa24.21■■□□□ 1.47
HSPG2-205ENST00000427897 IGHA2P01877 340 aa24.21■■□□□ 1.47
HSPG2-205ENST00000427897 ZNF543Q08ER8 600 aa24.21■■□□□ 1.47
HSPG2-205ENST00000427897 GJC2Q5T442 439 aaPredicted RBP24.21■■□□□ 1.47
HSPG2-205ENST00000427897 RALYLQ86SE5 291 aaKnown RBP24.21■■□□□ 1.47
HSPG2-205ENST00000427897 PNMA2Q9UL42 364 aa24.21■■□□□ 1.47
HSPG2-205ENST00000427897 PFASO15067 1338 aa24.2■■□□□ 1.46
HSPG2-205ENST00000427897 ZNF536O15090 1300 aa24.2■■□□□ 1.46
HSPG2-205ENST00000427897 TNKSO95271 1327 aa24.2■■□□□ 1.46
HSPG2-205ENST00000427897 SYNGAP1Q96PV0 1343 aa24.2■■□□□ 1.46
HSPG2-205ENST00000427897 ERICH2A1L162 156 aa24.2■■□□□ 1.46
HSPG2-205ENST00000427897 DNM1LO00429 736 aa24.2■■□□□ 1.46
HSPG2-205ENST00000427897 ICAM1P05362 532 aa24.2■■□□□ 1.46
HSPG2-205ENST00000427897 MNX1P50219 401 aaPredicted RBP24.2■■□□□ 1.46
HSPG2-205ENST00000427897 IFIT1BQ5T764 474 aaKnown RBP24.2■■□□□ 1.46
HSPG2-205ENST00000427897 NSMFQ6X4W1 530 aa24.2■■□□□ 1.46
HSPG2-205ENST00000427897 ZNF467Q7Z7K2 595 aaPredicted RBP24.2■■□□□ 1.46
HSPG2-205ENST00000427897 RANBP17Q9H2T7 1088 aaKnown RBP24.2■■□□□ 1.46
HSPG2-205ENST00000427897 ZHX1Q9UKY1 873 aaPredicted RBP24.2■■□□□ 1.46
HSPG2-205ENST00000427897 FRMPD3Q5JV73 1810 aa24.19■■□□□ 1.46
HSPG2-205ENST00000427897 DHX16O60231 1041 aaKnown RBP24.19■■□□□ 1.46
HSPG2-205ENST00000427897 GOLGA8HP0CJ92 632 aa24.19■■□□□ 1.46
HSPG2-205ENST00000427897 AKR1A1P14550 325 aa24.19■■□□□ 1.46
HSPG2-205ENST00000427897 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.19■■□□□ 1.46
HSPG2-205ENST00000427897 ENAHQ8N8S7 591 aaPredicted RBP24.19■■□□□ 1.46
HSPG2-205ENST00000427897 XPNPEP3Q9NQH7 507 aa24.19■■□□□ 1.46
HSPG2-205ENST00000427897 FAM184BQ9ULE4 1060 aa24.19■■□□□ 1.46
HSPG2-205ENST00000427897 MAMDC4Q6UXC1 1216 aa24.18■■□□□ 1.46
HSPG2-205ENST00000427897 A1CFQ9NQ94 594 aaKnown RBP24.18■■□□□ 1.46
HSPG2-205ENST00000427897 CYP21A2P08686 494 aa24.17■■□□□ 1.46
HSPG2-205ENST00000427897 SNHG28P0DPA3 235 aa24.17■■□□□ 1.46
HSPG2-205ENST00000427897 TAL1P17542 331 aaPredicted RBP24.17■■□□□ 1.46
HSPG2-205ENST00000427897 CNTN2Q02246 1040 aa24.17■■□□□ 1.46
HSPG2-205ENST00000427897 SART3Q15020 963 aaKnown RBP24.17■■□□□ 1.46
HSPG2-205ENST00000427897 MUM1L1Q5H9M0 696 aa24.17■■□□□ 1.46
HSPG2-205ENST00000427897 CASC1Q6TDU7 716 aa24.17■■□□□ 1.46
HSPG2-205ENST00000427897 CHRDL2Q6WN34 429 aa24.17■■□□□ 1.46
HSPG2-205ENST00000427897 RNF180Q86T96 592 aa24.17■■□□□ 1.46
HSPG2-205ENST00000427897 NCOA7Q8NI08 942 aa24.17■■□□□ 1.46
HSPG2-205ENST00000427897 ANKS1AQ92625 1134 aa24.17■■□□□ 1.46
HSPG2-205ENST00000427897 UBA5Q9GZZ9 404 aa24.17■■□□□ 1.46
HSPG2-205ENST00000427897 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.17■■□□□ 1.46
HSPG2-205ENST00000427897 COLQQ9Y215 455 aaPredicted RBP24.17■■□□□ 1.46
HSPG2-205ENST00000427897 ASB14A6NK59 587 aa24.16■■□□□ 1.46
HSPG2-205ENST00000427897 PARP1P09874 1014 aaKnown RBP24.16■■□□□ 1.46
HSPG2-205ENST00000427897 COL6A1P12109 1028 aa24.16■■□□□ 1.46
HSPG2-205ENST00000427897 ACVR2BQ13705 512 aa24.16■■□□□ 1.46
HSPG2-205ENST00000427897 ASPRV1Q53RT3 343 aa24.16■■□□□ 1.46
HSPG2-205ENST00000427897 ABHD16BQ9H3Z7 469 aa24.16■■□□□ 1.46
HSPG2-205ENST00000427897 PTPDC1A2A3K4 754 aa24.15■■□□□ 1.46
HSPG2-205ENST00000427897 IFIT3O14879 490 aaKnown RBP24.15■■□□□ 1.46
HSPG2-205ENST00000427897 SNAI1O95863 264 aaPredicted RBP24.15■■□□□ 1.46
HSPG2-205ENST00000427897 ZNF865P0CJ78 1059 aaPredicted RBP24.15■■□□□ 1.46
HSPG2-205ENST00000427897 ATN1P54259 1190 aaPredicted RBP24.15■■□□□ 1.46
HSPG2-205ENST00000427897 HABP4Q5JVS0 413 aaKnown RBP24.15■■□□□ 1.46
HSPG2-205ENST00000427897 ERICH6BQ5W0A0 696 aa24.15■■□□□ 1.46
HSPG2-205ENST00000427897 ARMCX2Q7L311 632 aa24.15■■□□□ 1.46
HSPG2-205ENST00000427897 CCDC144CPQ8IYA2 1237 aa24.15■■□□□ 1.46
HSPG2-205ENST00000427897 MAP4K1Q92918 833 aa24.15■■□□□ 1.46
HSPG2-205ENST00000427897 ZMYND8Q9ULU4 1186 aaPredicted RBP24.15■■□□□ 1.46
HSPG2-205ENST00000427897 RBM8AQ9Y5S9 174 aaKnown RBP24.15■■□□□ 1.46
HSPG2-205ENST00000427897 E7EWF7 191 aa24.14■■□□□ 1.45
HSPG2-205ENST00000427897 LRRC41Q15345 812 aa24.14■■□□□ 1.45
HSPG2-205ENST00000427897 CYB5R4Q7L1T6 521 aa24.14■■□□□ 1.45
HSPG2-205ENST00000427897 SPC25Q9HBM1 224 aa24.14■■□□□ 1.45
HSPG2-205ENST00000427897 VAT1LQ9HCJ6 419 aa24.14■■□□□ 1.45
HSPG2-205ENST00000427897 CYP39A1Q9NYL5 469 aa24.14■■□□□ 1.45
HSPG2-205ENST00000427897 ADD3Q9UEY8 706 aaKnown RBP24.14■■□□□ 1.45
HSPG2-205ENST00000427897 PGK1P00558 417 aa24.13■■□□□ 1.45
HSPG2-205ENST00000427897 LRRC26Q2I0M4 334 aa24.13■■□□□ 1.45
HSPG2-205ENST00000427897 USH1GQ495M9 461 aa24.13■■□□□ 1.45
HSPG2-205ENST00000427897 BMP2KLQ5H9B9 411 aa24.13■■□□□ 1.45
HSPG2-205ENST00000427897 NOL8Q76FK4 1167 aaKnown RBP24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms