RNA–Protein interactions for RNA: ENST00000427746.1

HLCS-204, Transcript of holocarboxylase synthetase, humanhuman

TSL 3

Gene HLCS, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-204ENST00000427746 TTBK2Q6IQ55 1244 aa22.78■■□□□ 1.24
HLCS-204ENST00000427746 ANKRD35Q8N283 1001 aa22.78■■□□□ 1.24
HLCS-204ENST00000427746 HOMER2Q9NSB8 354 aa22.78■■□□□ 1.24
HLCS-204ENST00000427746 CTNNA3Q9UI47 895 aa22.78■■□□□ 1.24
HLCS-204ENST00000427746 RAD50Q92878 1312 aa22.78■■□□□ 1.24
HLCS-204ENST00000427746 SYNGAP1Q96PV0 1343 aa22.78■■□□□ 1.24
HLCS-204ENST00000427746 SNAI1O95863 264 aaPredicted RBP22.77■■□□□ 1.24
HLCS-204ENST00000427746 SNHG28P0DPA3 235 aa22.77■■□□□ 1.24
HLCS-204ENST00000427746 PDHBP11177 359 aa22.77■■□□□ 1.24
HLCS-204ENST00000427746 CHMLP26374 656 aa22.77■■□□□ 1.24
HLCS-204ENST00000427746 SNAP25P60880 206 aa22.77■■□□□ 1.24
HLCS-204ENST00000427746 IMMTQ16891 758 aaKnown RBP22.77■■□□□ 1.24
HLCS-204ENST00000427746 TKFCQ3LXA3 575 aa22.77■■□□□ 1.24
HLCS-204ENST00000427746 DGKHQ86XP1 1220 aa22.77■■□□□ 1.24
HLCS-204ENST00000427746 ARRDC4Q8NCT1 418 aa22.77■■□□□ 1.24
HLCS-204ENST00000427746 ACAD9Q9H845 621 aa22.77■■□□□ 1.24
HLCS-204ENST00000427746 RNF146Q9NTX7 359 aa22.77■■□□□ 1.24
HLCS-204ENST00000427746 RBM27Q9P2N5 1060 aaKnown RBP22.77■■□□□ 1.24
HLCS-204ENST00000427746 KDM4AO75164 1064 aa22.76■■□□□ 1.23
HLCS-204ENST00000427746 SLC16A2P36021 539 aa22.76■■□□□ 1.23
HLCS-204ENST00000427746 GJC2Q5T442 439 aaPredicted RBP22.76■■□□□ 1.23
HLCS-204ENST00000427746 CCDC174Q6PII3 467 aa22.76■■□□□ 1.23
HLCS-204ENST00000427746 ZKSCAN3Q9BRR0 538 aa22.76■■□□□ 1.23
HLCS-204ENST00000427746 SENP6Q9GZR1 1112 aaPredicted RBP22.76■■□□□ 1.23
HLCS-204ENST00000427746 RANBP17Q9H2T7 1088 aaKnown RBP22.76■■□□□ 1.23
HLCS-204ENST00000427746 CNPY2Q9Y2B0 182 aa22.76■■□□□ 1.23
HLCS-204ENST00000427746 ANKS1AQ92625 1134 aa22.75■■□□□ 1.23
HLCS-204ENST00000427746 TRERF1Q96PN7 1200 aa22.75■■□□□ 1.23
HLCS-204ENST00000427746 A1CFQ9NQ94 594 aaKnown RBP22.75■■□□□ 1.23
HLCS-204ENST00000427746 FRMPD2Q68DX3 1309 aaPredicted RBP22.75■■□□□ 1.23
HLCS-204ENST00000427746 B4E1Z4 1266 aa22.74■■□□□ 1.23
HLCS-204ENST00000427746 ICAM1P05362 532 aa22.74■■□□□ 1.23
HLCS-204ENST00000427746 ALAS1P13196 640 aa22.74■■□□□ 1.23
HLCS-204ENST00000427746 AKR1A1P14550 325 aa22.74■■□□□ 1.23
HLCS-204ENST00000427746 ZNF543Q08ER8 600 aa22.74■■□□□ 1.23
HLCS-204ENST00000427746 LRRC41Q15345 812 aa22.74■■□□□ 1.23
HLCS-204ENST00000427746 SYDE2Q5VT97 1194 aa22.74■■□□□ 1.23
HLCS-204ENST00000427746 FAM133AQ8N9E0 248 aa22.74■■□□□ 1.23
HLCS-204ENST00000427746 GPCPD1Q9NPB8 672 aa22.74■■□□□ 1.23
HLCS-204ENST00000427746 ZSWIM5Q9P217 1185 aa22.74■■□□□ 1.23
HLCS-204ENST00000427746 ZMYND8Q9ULU4 1186 aaPredicted RBP22.74■■□□□ 1.23
HLCS-204ENST00000427746 RARBP10826 455 aa22.73■■□□□ 1.23
HLCS-204ENST00000427746 FXR1P51114 621 aaKnown RBP eCLIP22.73■■□□□ 1.23
HLCS-204ENST00000427746 CNTN2Q02246 1040 aa22.73■■□□□ 1.23
HLCS-204ENST00000427746 CCDC178Q5BJE1 867 aa22.73■■□□□ 1.23
HLCS-204ENST00000427746 MUM1L1Q5H9M0 696 aa22.73■■□□□ 1.23
HLCS-204ENST00000427746 IQCA1Q86XH1 822 aa22.73■■□□□ 1.23
HLCS-204ENST00000427746 RUFY2Q8WXA3 655 aa22.73■■□□□ 1.23
HLCS-204ENST00000427746 XPNPEP3Q9NQH7 507 aa22.73■■□□□ 1.23
HLCS-204ENST00000427746 CCPG1Q9ULG6 757 aa22.73■■□□□ 1.23
HLCS-204ENST00000427746 KBTBD13C9JR72 458 aa22.72■■□□□ 1.23
HLCS-204ENST00000427746 ENAHQ8N8S7 591 aaPredicted RBP22.72■■□□□ 1.23
HLCS-204ENST00000427746 ZSCAN10Q96SZ4 725 aaPredicted RBP22.72■■□□□ 1.23
HLCS-204ENST00000427746 GDF15Q99988 308 aa22.72■■□□□ 1.23
HLCS-204ENST00000427746 KRT23Q9C075 422 aa22.72■■□□□ 1.23
HLCS-204ENST00000427746 CNNM2Q9H8M5 875 aa22.72■■□□□ 1.23
HLCS-204ENST00000427746 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.72■■□□□ 1.23
HLCS-204ENST00000427746 SMCHD1A6NHR9 2005 aa22.72■■□□□ 1.23
HLCS-204ENST00000427746 SOWAHBA6NEL2 793 aa22.71■■□□□ 1.23
HLCS-204ENST00000427746 POTEB2H3BUK9 544 aa22.71■■□□□ 1.23
HLCS-204ENST00000427746 SYN1P17600 705 aa22.71■■□□□ 1.23
HLCS-204ENST00000427746 PTH1RQ03431 593 aa22.71■■□□□ 1.23
HLCS-204ENST00000427746 PNMA1Q8ND90 353 aa22.71■■□□□ 1.23
HLCS-204ENST00000427746 LENG1Q96BZ8 264 aaPredicted RBP22.71■■□□□ 1.23
HLCS-204ENST00000427746 CYP39A1Q9NYL5 469 aa22.71■■□□□ 1.23
HLCS-204ENST00000427746 SGSM2O43147 1006 aa22.7■■□□□ 1.22
HLCS-204ENST00000427746 PGK1P00558 417 aa22.7■■□□□ 1.22
HLCS-204ENST00000427746 ATN1P54259 1190 aaPredicted RBP22.7■■□□□ 1.22
HLCS-204ENST00000427746 ACVR2BQ13705 512 aa22.7■■□□□ 1.22
HLCS-204ENST00000427746 GPATCH4Q5T3I0 446 aaKnown RBP22.7■■□□□ 1.22
HLCS-204ENST00000427746 ARMCX2Q7L311 632 aa22.7■■□□□ 1.22
HLCS-204ENST00000427746 CCDC144CPQ8IYA2 1237 aa22.7■■□□□ 1.22
HLCS-204ENST00000427746 KATNBL1Q9H079 304 aa22.7■■□□□ 1.22
HLCS-204ENST00000427746 ABHD16BQ9H3Z7 469 aa22.7■■□□□ 1.22
HLCS-204ENST00000427746 ZHX1Q9UKY1 873 aaPredicted RBP22.7■■□□□ 1.22
HLCS-204ENST00000427746 FAM184BQ9ULE4 1060 aa22.7■■□□□ 1.22
HLCS-204ENST00000427746 ASTN1O14525 1302 aa22.7■■□□□ 1.22
HLCS-204ENST00000427746 TRIOBPQ9H2D6 2365 aa22.69■■□□□ 1.22
HLCS-204ENST00000427746 TNKSO95271 1327 aa22.69■■□□□ 1.22
HLCS-204ENST00000427746 ADAMTS4O75173 837 aa22.69■■□□□ 1.22
HLCS-204ENST00000427746 MYCNP04198 464 aaPredicted RBP22.69■■□□□ 1.22
HLCS-204ENST00000427746 ADCYAP1R1P41586 468 aa22.69■■□□□ 1.22
HLCS-204ENST00000427746 SLC39A5Q6ZMH5 540 aa22.69■■□□□ 1.22
HLCS-204ENST00000427746 KAT14Q9H8E8 782 aa22.69■■□□□ 1.22
HLCS-204ENST00000427746 PHF24Q9UPV7 400 aa22.69■■□□□ 1.22
HLCS-204ENST00000427746 A0A1W2PPC1 479 aa22.68■■□□□ 1.22
HLCS-204ENST00000427746 CYP21A2P08686 494 aa22.68■■□□□ 1.22
HLCS-204ENST00000427746 GOLGA8HP0CJ92 632 aa22.68■■□□□ 1.22
HLCS-204ENST00000427746 BMP8BP34820 402 aa22.68■■□□□ 1.22
HLCS-204ENST00000427746 SNX17Q15036 470 aa22.68■■□□□ 1.22
HLCS-204ENST00000427746 RNF180Q86T96 592 aa22.68■■□□□ 1.22
HLCS-204ENST00000427746 SYNRGQ9UMZ2 1314 aa22.67■■□□□ 1.22
HLCS-204ENST00000427746 ADCY6O43306 1168 aa22.67■■□□□ 1.22
HLCS-204ENST00000427746 DUSP11O75319 330 aaKnown RBP22.67■■□□□ 1.22
HLCS-204ENST00000427746 MAGEA10P43363 369 aaPredicted RBP22.67■■□□□ 1.22
HLCS-204ENST00000427746 RTP1P59025 263 aa22.67■■□□□ 1.22
HLCS-204ENST00000427746 CCDC144BQ3MJ40 725 aa22.67■■□□□ 1.22
HLCS-204ENST00000427746 NSMFQ6X4W1 530 aa22.67■■□□□ 1.22
HLCS-204ENST00000427746 PNMA2Q9UL42 364 aa22.67■■□□□ 1.22
HLCS-204ENST00000427746 U3KPZ7 1027 aaPredicted RBP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms