RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 KDM4AO75164 1064 aa21.67■■□□□ 1.06
GPC1-205ENST00000427506 SLC16A2P36021 539 aa21.67■■□□□ 1.06
GPC1-205ENST00000427506 NT5C2P49902 561 aa21.67■■□□□ 1.06
GPC1-205ENST00000427506 TKFCQ3LXA3 575 aa21.67■■□□□ 1.06
GPC1-205ENST00000427506 TTBK2Q6IQ55 1244 aa21.67■■□□□ 1.06
GPC1-205ENST00000427506 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.67■■□□□ 1.06
GPC1-205ENST00000427506 IQCA1Q86XH1 822 aa21.67■■□□□ 1.06
GPC1-205ENST00000427506 MSL3Q8N5Y2 521 aaKnown RBP21.67■■□□□ 1.06
GPC1-205ENST00000427506 TRERF1Q96PN7 1200 aa21.67■■□□□ 1.06
GPC1-205ENST00000427506 ZMYND8Q9ULU4 1186 aaPredicted RBP21.67■■□□□ 1.06
GPC1-205ENST00000427506 RAD50Q92878 1312 aa21.66■■□□□ 1.06
GPC1-205ENST00000427506 B4E1Z4 1266 aa21.66■■□□□ 1.06
GPC1-205ENST00000427506 RARBP10826 455 aa21.66■■□□□ 1.06
GPC1-205ENST00000427506 TAL1P17542 331 aaPredicted RBP21.66■■□□□ 1.06
GPC1-205ENST00000427506 CCDC178Q5BJE1 867 aa21.66■■□□□ 1.06
GPC1-205ENST00000427506 SYDE2Q5VT97 1194 aa21.66■■□□□ 1.06
GPC1-205ENST00000427506 IL25Q9H293 177 aa21.66■■□□□ 1.06
GPC1-205ENST00000427506 CCPG1Q9ULG6 757 aa21.66■■□□□ 1.06
GPC1-205ENST00000427506 FRMPD3Q5JV73 1810 aa21.66■■□□□ 1.06
GPC1-205ENST00000427506 PLXNA1Q9UIW2 1896 aa21.65■■□□□ 1.06
GPC1-205ENST00000427506 SYNGAP1Q96PV0 1343 aa21.65■■□□□ 1.06
GPC1-205ENST00000427506 POTEB2H3BUK9 544 aa21.65■■□□□ 1.06
GPC1-205ENST00000427506 PDHBP11177 359 aa21.65■■□□□ 1.06
GPC1-205ENST00000427506 CHMLP26374 656 aa21.65■■□□□ 1.06
GPC1-205ENST00000427506 LRRC26Q2I0M4 334 aa21.65■■□□□ 1.06
GPC1-205ENST00000427506 ZNF467Q7Z7K2 595 aaPredicted RBP21.65■■□□□ 1.06
GPC1-205ENST00000427506 DGKHQ86XP1 1220 aa21.65■■□□□ 1.06
GPC1-205ENST00000427506 KRT23Q9C075 422 aa21.65■■□□□ 1.06
GPC1-205ENST00000427506 XPNPEP3Q9NQH7 507 aa21.65■■□□□ 1.06
GPC1-205ENST00000427506 RBM27Q9P2N5 1060 aaKnown RBP21.65■■□□□ 1.06
GPC1-205ENST00000427506 ZHX1Q9UKY1 873 aaPredicted RBP21.65■■□□□ 1.06
GPC1-205ENST00000427506 ZNF865P0CJ78 1059 aaPredicted RBP21.64■■□□□ 1.05
GPC1-205ENST00000427506 AKR1A1P14550 325 aa21.64■■□□□ 1.05
GPC1-205ENST00000427506 SYN1P17600 705 aa21.64■■□□□ 1.05
GPC1-205ENST00000427506 ATN1P54259 1190 aaPredicted RBP21.64■■□□□ 1.05
GPC1-205ENST00000427506 MAMDC4Q6UXC1 1216 aa21.64■■□□□ 1.05
GPC1-205ENST00000427506 BTNL9Q6UXG8 535 aa21.64■■□□□ 1.05
GPC1-205ENST00000427506 KAT14Q9H8E8 782 aa21.64■■□□□ 1.05
GPC1-205ENST00000427506 CNNM2Q9H8M5 875 aa21.64■■□□□ 1.05
GPC1-205ENST00000427506 ALPK3Q96L96 1907 aa21.63■■□□□ 1.05
GPC1-205ENST00000427506 SNAI1O95863 264 aaPredicted RBP21.63■■□□□ 1.05
GPC1-205ENST00000427506 ICAM1P05362 532 aa21.63■■□□□ 1.05
GPC1-205ENST00000427506 CNTN2Q02246 1040 aa21.63■■□□□ 1.05
GPC1-205ENST00000427506 ZNF543Q08ER8 600 aa21.63■■□□□ 1.05
GPC1-205ENST00000427506 LRRC41Q15345 812 aa21.63■■□□□ 1.05
GPC1-205ENST00000427506 ZSCAN10Q96SZ4 725 aaPredicted RBP21.63■■□□□ 1.05
GPC1-205ENST00000427506 RANBP17Q9H2T7 1088 aaKnown RBP21.63■■□□□ 1.05
GPC1-205ENST00000427506 A1CFQ9NQ94 594 aaKnown RBP21.63■■□□□ 1.05
GPC1-205ENST00000427506 ZSWIM5Q9P217 1185 aa21.63■■□□□ 1.05
GPC1-205ENST00000427506 FAM184BQ9ULE4 1060 aa21.63■■□□□ 1.05
GPC1-205ENST00000427506 LAMA4Q16363 1823 aa21.62■■□□□ 1.05
GPC1-205ENST00000427506 MUM1L1Q5H9M0 696 aa21.62■■□□□ 1.05
GPC1-205ENST00000427506 RNF180Q86T96 592 aa21.62■■□□□ 1.05
GPC1-205ENST00000427506 PNMA1Q8ND90 353 aa21.62■■□□□ 1.05
GPC1-205ENST00000427506 UBAC1Q9BSL1 405 aa21.62■■□□□ 1.05
GPC1-205ENST00000427506 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.62■■□□□ 1.05
GPC1-205ENST00000427506 PGK1P00558 417 aa21.61■■□□□ 1.05
GPC1-205ENST00000427506 ADCYAP1R1P41586 468 aa21.61■■□□□ 1.05
GPC1-205ENST00000427506 ACVR2BQ13705 512 aa21.61■■□□□ 1.05
GPC1-205ENST00000427506 GPATCH4Q5T3I0 446 aaKnown RBP21.61■■□□□ 1.05
GPC1-205ENST00000427506 NSMFQ6X4W1 530 aa21.61■■□□□ 1.05
GPC1-205ENST00000427506 ARMCX2Q7L311 632 aa21.61■■□□□ 1.05
GPC1-205ENST00000427506 ABHD16BQ9H3Z7 469 aa21.61■■□□□ 1.05
GPC1-205ENST00000427506 TNKSO95271 1327 aa21.6■■□□□ 1.05
GPC1-205ENST00000427506 GOLGA8HP0CJ92 632 aa21.6■■□□□ 1.05
GPC1-205ENST00000427506 SNHG28P0DPA3 235 aa21.6■■□□□ 1.05
GPC1-205ENST00000427506 TRDNQ13061 729 aa21.6■■□□□ 1.05
GPC1-205ENST00000427506 CCDC144CPQ8IYA2 1237 aa21.6■■□□□ 1.05
GPC1-205ENST00000427506 FAM133AQ8N9E0 248 aa21.6■■□□□ 1.05
GPC1-205ENST00000427506 FERMT2Q96AC1 680 aa21.6■■□□□ 1.05
GPC1-205ENST00000427506 LENG1Q96BZ8 264 aaPredicted RBP21.6■■□□□ 1.05
GPC1-205ENST00000427506 FGD4Q96M96 766 aa21.6■■□□□ 1.05
GPC1-205ENST00000427506 U3KPZ7 1027 aaPredicted RBP21.6■■□□□ 1.05
GPC1-205ENST00000427506 CEP290O15078 2479 aa21.59■■□□□ 1.05
GPC1-205ENST00000427506 PTH1RQ03431 593 aa21.59■■□□□ 1.05
GPC1-205ENST00000427506 SLC39A5Q6ZMH5 540 aa21.59■■□□□ 1.05
GPC1-205ENST00000427506 ENAHQ8N8S7 591 aaPredicted RBP21.59■■□□□ 1.05
GPC1-205ENST00000427506 ANKS1AQ92625 1134 aa21.59■■□□□ 1.05
GPC1-205ENST00000427506 CYP39A1Q9NYL5 469 aa21.59■■□□□ 1.05
GPC1-205ENST00000427506 PNMA2Q9UL42 364 aa21.59■■□□□ 1.05
GPC1-205ENST00000427506 ATP11BQ9Y2G3 1177 aa21.59■■□□□ 1.05
GPC1-205ENST00000427506 SOWAHBA6NEL2 793 aa21.58■■□□□ 1.05
GPC1-205ENST00000427506 ASB14A6NK59 587 aa21.58■■□□□ 1.05
GPC1-205ENST00000427506 SGSM2O43147 1006 aa21.58■■□□□ 1.05
GPC1-205ENST00000427506 FXR1P51114 621 aaKnown RBP eCLIP21.58■■□□□ 1.05
GPC1-205ENST00000427506 RTP1P59025 263 aa21.58■■□□□ 1.05
GPC1-205ENST00000427506 UBA5Q9GZZ9 404 aa21.58■■□□□ 1.05
GPC1-205ENST00000427506 PRO3102Q9H379 93 aa21.58■■□□□ 1.05
GPC1-205ENST00000427506 CCDC144BQ3MJ40 725 aa21.57■■□□□ 1.04
GPC1-205ENST00000427506 IFIT1BQ5T764 474 aaKnown RBP21.57■■□□□ 1.04
GPC1-205ENST00000427506 PRKAG2Q9UGJ0 569 aa21.57■■□□□ 1.04
GPC1-205ENST00000427506 PTPDC1A2A3K4 754 aa21.56■■□□□ 1.04
GPC1-205ENST00000427506 DUSP11O75319 330 aaKnown RBP21.56■■□□□ 1.04
GPC1-205ENST00000427506 CYP21A2P08686 494 aa21.56■■□□□ 1.04
GPC1-205ENST00000427506 MAGEA10P43363 369 aaPredicted RBP21.56■■□□□ 1.04
GPC1-205ENST00000427506 BAATQ14032 418 aaPredicted RBP21.56■■□□□ 1.04
GPC1-205ENST00000427506 ASPRV1Q53RT3 343 aa21.56■■□□□ 1.04
GPC1-205ENST00000427506 CENPQQ7L2Z9 268 aaPredicted RBP21.56■■□□□ 1.04
GPC1-205ENST00000427506 RALYLQ86SE5 291 aaKnown RBP21.56■■□□□ 1.04
GPC1-205ENST00000427506 GDF15Q99988 308 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms