RNA–Protein interactions for RNA: ENST00000427276.1

LINC01108-201, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 2 BASIC

Gene LINC01108, Length 3,152 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-201ENST00000427276 PROCA1Q8NCQ7 364 aaPredicted RBP8.36□□□□□ -1.07
LINC01108-201ENST00000427276 FAM212AQ96EL1 285 aa8.36□□□□□ -1.07
LINC01108-201ENST00000427276 CCDC43Q96MW1 224 aaKnown RBP8.36□□□□□ -1.07
LINC01108-201ENST00000427276 NOC4LQ9BVI4 516 aaKnown RBP8.36□□□□□ -1.07
LINC01108-201ENST00000427276 FRMD3A2A2Y4 597 aa8.36□□□□□ -1.07
LINC01108-201ENST00000427276 BCAMP50895 628 aa8.36□□□□□ -1.07
LINC01108-201ENST00000427276 SEC24CP53992 1094 aa8.36□□□□□ -1.07
LINC01108-201ENST00000427276 IFT88Q13099 833 aa8.36□□□□□ -1.07
LINC01108-201ENST00000427276 FAM47AQ5JRC9 791 aa8.36□□□□□ -1.07
LINC01108-201ENST00000427276 CFAP58Q5T655 872 aa8.36□□□□□ -1.07
LINC01108-201ENST00000427276 EP400NLQ6ZTU2 488 aa8.36□□□□□ -1.07
LINC01108-201ENST00000427276 DNAJC10Q8IXB1 793 aa8.36□□□□□ -1.07
LINC01108-201ENST00000427276 EHBP1Q8NDI1 1231 aa8.36□□□□□ -1.07
LINC01108-201ENST00000427276 ESR2Q92731 530 aa8.36□□□□□ -1.07
LINC01108-201ENST00000427276 HPS3Q969F9 1004 aa8.36□□□□□ -1.07
LINC01108-201ENST00000427276 MS4A14Q96JA4 679 aa8.36□□□□□ -1.07
LINC01108-201ENST00000427276 TUBGCP2Q9BSJ2 902 aa8.36□□□□□ -1.07
LINC01108-201ENST00000427276 IFIH1Q9BYX4 1025 aaKnown RBP8.36□□□□□ -1.07
LINC01108-201ENST00000427276 RWDD2AQ9UIY3 292 aa8.36□□□□□ -1.07
LINC01108-201ENST00000427276 FAM184BQ9ULE4 1060 aa8.36□□□□□ -1.07
LINC01108-201ENST00000427276 SOS2Q07890 1332 aaPredicted RBP8.35□□□□□ -1.07
LINC01108-201ENST00000427276 GSG1L2A8MUP6 293 aa8.35□□□□□ -1.07
LINC01108-201ENST00000427276 AGPSO00116 658 aa8.35□□□□□ -1.07
LINC01108-201ENST00000427276 HSPA1LP34931 641 aa8.35□□□□□ -1.07
LINC01108-201ENST00000427276 ACTN3Q08043 901 aaPredicted RBP8.35□□□□□ -1.07
LINC01108-201ENST00000427276 NNTQ13423 1086 aa8.35□□□□□ -1.07
LINC01108-201ENST00000427276 HLFQ16534 295 aa8.35□□□□□ -1.07
LINC01108-201ENST00000427276 TMC4Q7Z404 712 aa8.35□□□□□ -1.07
LINC01108-201ENST00000427276 GPKOWQ92917 476 aaPredicted RBP eCLIP8.35□□□□□ -1.07
LINC01108-201ENST00000427276 FERMT2Q96AC1 680 aa8.35□□□□□ -1.07
LINC01108-201ENST00000427276 SCLT1Q96NL6 688 aa8.35□□□□□ -1.07
LINC01108-201ENST00000427276 CD248Q9HCU0 757 aa8.35□□□□□ -1.07
LINC01108-201ENST00000427276 LIMA1Q9UHB6 759 aaKnown RBP8.35□□□□□ -1.07
LINC01108-201ENST00000427276 ZSCAN5CA6NGD5 496 aaPredicted RBP8.35□□□□□ -1.07
LINC01108-201ENST00000427276 E7EVH7 732 aa8.35□□□□□ -1.07
LINC01108-201ENST00000427276 GTPBP6O43824 516 aaPredicted RBP8.35□□□□□ -1.07
LINC01108-201ENST00000427276 NMT2O60551 498 aa8.35□□□□□ -1.07
LINC01108-201ENST00000427276 RPS6KA5O75582 802 aa8.35□□□□□ -1.07
LINC01108-201ENST00000427276 PDE8BO95263 885 aa8.35□□□□□ -1.07
LINC01108-201ENST00000427276 CDR1P51861 262 aa8.35□□□□□ -1.07
LINC01108-201ENST00000427276 ASIC1P78348 528 aa8.35□□□□□ -1.07
LINC01108-201ENST00000427276 GUCY2DQ02846 1103 aa8.35□□□□□ -1.07
LINC01108-201ENST00000427276 RASGRF1Q13972 1273 aa8.35□□□□□ -1.07
LINC01108-201ENST00000427276 CACNA2D4Q7Z3S7 1137 aa8.35□□□□□ -1.07
LINC01108-201ENST00000427276 IQCA1Q86XH1 822 aa8.35□□□□□ -1.07
LINC01108-201ENST00000427276 KLHL7Q8IXQ5 586 aa8.35□□□□□ -1.07
LINC01108-201ENST00000427276 TSEN2Q8NCE0 465 aaKnown RBP8.35□□□□□ -1.07
LINC01108-201ENST00000427276 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.35□□□□□ -1.07
LINC01108-201ENST00000427276 VIPAS39Q9H9C1 493 aa8.35□□□□□ -1.07
LINC01108-201ENST00000427276 RMND1Q9NWS8 449 aa8.35□□□□□ -1.07
LINC01108-201ENST00000427276 NFU1Q9UMS0 254 aa8.35□□□□□ -1.07
LINC01108-201ENST00000427276 JAG2Q9Y219 1238 aa8.35□□□□□ -1.07
LINC01108-201ENST00000427276 CAPN6Q9Y6Q1 641 aa8.35□□□□□ -1.07
LINC01108-201ENST00000427276 PSMD14O00487 310 aa8.34□□□□□ -1.07
LINC01108-201ENST00000427276 EIF3HO15372 352 aaKnown RBP eCLIP8.34□□□□□ -1.07
LINC01108-201ENST00000427276 VEGFAP15692 232 aaPredicted RBP8.34□□□□□ -1.07
LINC01108-201ENST00000427276 VAV2P52735 878 aa8.34□□□□□ -1.07
LINC01108-201ENST00000427276 PDE4DQ08499 809 aa8.34□□□□□ -1.07
LINC01108-201ENST00000427276 ZNF658Q5TYW1 1059 aaPredicted RBP8.34□□□□□ -1.07
LINC01108-201ENST00000427276 TMTC2Q8N394 836 aa8.34□□□□□ -1.07
LINC01108-201ENST00000427276 UIMC1Q96RL1 719 aa8.34□□□□□ -1.07
LINC01108-201ENST00000427276 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.34□□□□□ -1.07
LINC01108-201ENST00000427276 RNF41Q9H4P4 317 aaPredicted RBP8.34□□□□□ -1.07
LINC01108-201ENST00000427276 CXorf56Q9H5V9 222 aa8.34□□□□□ -1.07
LINC01108-201ENST00000427276 NLRC4Q9NPP4 1024 aa8.34□□□□□ -1.07
LINC01108-201ENST00000427276 WDR19Q8NEZ3 1342 aa8.34□□□□□ -1.07
LINC01108-201ENST00000427276 GOLGA6L7A0A1B0GV03 622 aa8.34□□□□□ -1.07
LINC01108-201ENST00000427276 NUTM2BA6NNL0 878 aaPredicted RBP8.34□□□□□ -1.07
LINC01108-201ENST00000427276 NUTM2EB1AL46 878 aaPredicted RBP8.34□□□□□ -1.07
LINC01108-201ENST00000427276 H7C1D1 291 aa8.34□□□□□ -1.07
LINC01108-201ENST00000427276 UQCRFS1P1P0C7P4 283 aa8.34□□□□□ -1.07
LINC01108-201ENST00000427276 SLC5A1P13866 664 aa8.34□□□□□ -1.07
LINC01108-201ENST00000427276 RASSF7Q02833 373 aa8.34□□□□□ -1.07
LINC01108-201ENST00000427276 RRAGAQ7L523 313 aa8.34□□□□□ -1.07
LINC01108-201ENST00000427276 SPATA4Q8NEY3 305 aa8.34□□□□□ -1.07
LINC01108-201ENST00000427276 ALS2CR12Q96Q35 445 aa8.34□□□□□ -1.07
LINC01108-201ENST00000427276 EPB41L5Q9HCM4 733 aa8.34□□□□□ -1.07
LINC01108-201ENST00000427276 EXOC1Q9NV70 894 aa8.34□□□□□ -1.07
LINC01108-201ENST00000427276 PACSIN2Q9UNF0 486 aaPredicted RBP8.34□□□□□ -1.07
LINC01108-201ENST00000427276 STK36Q9NRP7 1315 aa8.34□□□□□ -1.07
LINC01108-201ENST00000427276 CCDC194A0A1B0GVG4 234 aa8.34□□□□□ -1.07
LINC01108-201ENST00000427276 MAGEA1P43355 309 aa8.34□□□□□ -1.07
LINC01108-201ENST00000427276 AARSP49588 968 aaKnown RBP eCLIP8.34□□□□□ -1.07
LINC01108-201ENST00000427276 E2F5Q15329 346 aa8.34□□□□□ -1.07
LINC01108-201ENST00000427276 WDR59Q6PJI9 974 aa8.34□□□□□ -1.07
LINC01108-201ENST00000427276 POTEDQ86YR6 584 aa8.34□□□□□ -1.07
LINC01108-201ENST00000427276 ZCRB1Q8TBF4 217 aaKnown RBP8.34□□□□□ -1.07
LINC01108-201ENST00000427276 CCDC47Q96A33 483 aaKnown RBP8.34□□□□□ -1.07
LINC01108-201ENST00000427276 CCDC114Q96M63 670 aa8.34□□□□□ -1.07
LINC01108-201ENST00000427276 MTRQ99707 1265 aa8.34□□□□□ -1.07
LINC01108-201ENST00000427276 GEMIN8Q9NWZ8 242 aaKnown RBP8.34□□□□□ -1.07
LINC01108-201ENST00000427276 RIPOR2Q9Y4F9 1068 aa8.34□□□□□ -1.07
LINC01108-201ENST00000427276 OVOS2A0A0G2JMS6 1433 aa8.34□□□□□ -1.08
LINC01108-201ENST00000427276 ITIH6Q6UXX5 1313 aa8.34□□□□□ -1.08
LINC01108-201ENST00000427276 GOLGA6L10A6NI86 522 aa8.33□□□□□ -1.08
LINC01108-201ENST00000427276 LGALS16A8MUM7 142 aa8.33□□□□□ -1.08
LINC01108-201ENST00000427276 GOLGA8KD6RF30 607 aa8.33□□□□□ -1.08
LINC01108-201ENST00000427276 SEMA3EO15041 775 aa8.33□□□□□ -1.08
LINC01108-201ENST00000427276 ATP6V1AP38606 617 aa8.33□□□□□ -1.08
LINC01108-201ENST00000427276 CEP85LQ5SZL2 805 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms