RNA–Protein interactions for RNA: ENST00000426962.1

LINC01238-202, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2

Gene LINC01238, Length 430 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-202ENST00000426962 PDHBP11177 359 aa12.65□□□□□ -0.38
LINC01238-202ENST00000426962 SLC16A2P36021 539 aa12.65□□□□□ -0.38
LINC01238-202ENST00000426962 SNAP25P60880 206 aa12.65□□□□□ -0.38
LINC01238-202ENST00000426962 HABP4Q5JVS0 413 aaKnown RBP12.65□□□□□ -0.38
LINC01238-202ENST00000426962 SYDE2Q5VT97 1194 aa12.65□□□□□ -0.38
LINC01238-202ENST00000426962 ANO1Q5XXA6 986 aa12.65□□□□□ -0.38
LINC01238-202ENST00000426962 CCDC174Q6PII3 467 aa12.65□□□□□ -0.38
LINC01238-202ENST00000426962 RASGRP2Q7LDG7 609 aa12.65□□□□□ -0.38
LINC01238-202ENST00000426962 SENP6Q9GZR1 1112 aaPredicted RBP12.65□□□□□ -0.38
LINC01238-202ENST00000426962 ACAD9Q9H845 621 aa12.65□□□□□ -0.38
LINC01238-202ENST00000426962 GPCPD1Q9NPB8 672 aa12.65□□□□□ -0.38
LINC01238-202ENST00000426962 HOMER2Q9NSB8 354 aa12.65□□□□□ -0.38
LINC01238-202ENST00000426962 COLQQ9Y215 455 aaPredicted RBP12.65□□□□□ -0.38
LINC01238-202ENST00000426962 CNPY2Q9Y2B0 182 aa12.65□□□□□ -0.38
LINC01238-202ENST00000426962 PFASO15067 1338 aa12.64□□□□□ -0.39
LINC01238-202ENST00000426962 FRMPD2Q68DX3 1309 aaPredicted RBP12.64□□□□□ -0.39
LINC01238-202ENST00000426962 SYNGAP1Q96PV0 1343 aa12.64□□□□□ -0.39
LINC01238-202ENST00000426962 SGSM2O43147 1006 aa12.64□□□□□ -0.39
LINC01238-202ENST00000426962 ICAM1P05362 532 aa12.64□□□□□ -0.39
LINC01238-202ENST00000426962 ZNF865P0CJ78 1059 aaPredicted RBP12.64□□□□□ -0.39
LINC01238-202ENST00000426962 SNHG28P0DPA3 235 aa12.64□□□□□ -0.39
LINC01238-202ENST00000426962 ALAS1P13196 640 aa12.64□□□□□ -0.39
LINC01238-202ENST00000426962 ZNF543Q08ER8 600 aa12.64□□□□□ -0.39
LINC01238-202ENST00000426962 ZSCAN10Q96SZ4 725 aaPredicted RBP12.64□□□□□ -0.39
LINC01238-202ENST00000426962 RANBP17Q9H2T7 1088 aaKnown RBP12.64□□□□□ -0.39
LINC01238-202ENST00000426962 RNF146Q9NTX7 359 aa12.64□□□□□ -0.39
LINC01238-202ENST00000426962 U3KPZ7 1027 aaPredicted RBP12.64□□□□□ -0.39
LINC01238-202ENST00000426962 POTEB2H3BUK9 544 aa12.63□□□□□ -0.39
LINC01238-202ENST00000426962 SNAI1O95863 264 aaPredicted RBP12.63□□□□□ -0.39
LINC01238-202ENST00000426962 RARBP10826 455 aa12.63□□□□□ -0.39
LINC01238-202ENST00000426962 AKR1A1P14550 325 aa12.63□□□□□ -0.39
LINC01238-202ENST00000426962 TAL1P17542 331 aaPredicted RBP12.63□□□□□ -0.39
LINC01238-202ENST00000426962 PTH1RQ03431 593 aa12.63□□□□□ -0.39
LINC01238-202ENST00000426962 TRDNQ13061 729 aa12.63□□□□□ -0.39
LINC01238-202ENST00000426962 GPATCH4Q5T3I0 446 aaKnown RBP12.63□□□□□ -0.39
LINC01238-202ENST00000426962 GJC2Q5T442 439 aaPredicted RBP12.63□□□□□ -0.39
LINC01238-202ENST00000426962 CHRDL2Q6WN34 429 aa12.63□□□□□ -0.39
LINC01238-202ENST00000426962 CENPQQ7L2Z9 268 aaPredicted RBP12.63□□□□□ -0.39
LINC01238-202ENST00000426962 PNMA1Q8ND90 353 aa12.63□□□□□ -0.39
LINC01238-202ENST00000426962 KAT14Q9H8E8 782 aa12.63□□□□□ -0.39
LINC01238-202ENST00000426962 A1CFQ9NQ94 594 aaKnown RBP12.63□□□□□ -0.39
LINC01238-202ENST00000426962 PNMA2Q9UL42 364 aa12.63□□□□□ -0.39
LINC01238-202ENST00000426962 FAM184BQ9ULE4 1060 aa12.63□□□□□ -0.39
LINC01238-202ENST00000426962 CCPG1Q9ULG6 757 aa12.63□□□□□ -0.39
LINC01238-202ENST00000426962 KBTBD13C9JR72 458 aa12.62□□□□□ -0.39
LINC01238-202ENST00000426962 CNTN2Q02246 1040 aa12.62□□□□□ -0.39
LINC01238-202ENST00000426962 ACVR2BQ13705 512 aa12.62□□□□□ -0.39
LINC01238-202ENST00000426962 LRRC26Q2I0M4 334 aa12.62□□□□□ -0.39
LINC01238-202ENST00000426962 MUM1L1Q5H9M0 696 aa12.62□□□□□ -0.39
LINC01238-202ENST00000426962 C7orf61Q8IZ16 206 aa12.62□□□□□ -0.39
LINC01238-202ENST00000426962 ENAHQ8N8S7 591 aaPredicted RBP12.62□□□□□ -0.39
LINC01238-202ENST00000426962 FAM133AQ8N9E0 248 aa12.62□□□□□ -0.39
LINC01238-202ENST00000426962 MAP4K1Q92918 833 aa12.62□□□□□ -0.39
LINC01238-202ENST00000426962 UBAC1Q9BSL1 405 aa12.62□□□□□ -0.39
LINC01238-202ENST00000426962 ABHD16BQ9H3Z7 469 aa12.62□□□□□ -0.39
LINC01238-202ENST00000426962 ASB14A6NK59 587 aa12.61□□□□□ -0.39
LINC01238-202ENST00000426962 MYCNP04198 464 aaPredicted RBP12.61□□□□□ -0.39
LINC01238-202ENST00000426962 CYP21A2P08686 494 aa12.61□□□□□ -0.39
LINC01238-202ENST00000426962 LRRC41Q15345 812 aa12.61□□□□□ -0.39
LINC01238-202ENST00000426962 IFIT1BQ5T764 474 aaKnown RBP12.61□□□□□ -0.39
LINC01238-202ENST00000426962 KIAA1211Q6ZU35 1233 aa12.61□□□□□ -0.39
LINC01238-202ENST00000426962 ARMCX2Q7L311 632 aa12.61□□□□□ -0.39
LINC01238-202ENST00000426962 RNF180Q86T96 592 aa12.61□□□□□ -0.39
LINC01238-202ENST00000426962 CCDC144CPQ8IYA2 1237 aa12.61□□□□□ -0.39
LINC01238-202ENST00000426962 FGD4Q96M96 766 aa12.61□□□□□ -0.39
LINC01238-202ENST00000426962 XPNPEP3Q9NQH7 507 aa12.61□□□□□ -0.39
LINC01238-202ENST00000426962 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.61□□□□□ -0.39
LINC01238-202ENST00000426962 CYP39A1Q9NYL5 469 aa12.61□□□□□ -0.39
LINC01238-202ENST00000426962 TNKSO95271 1327 aa12.61□□□□□ -0.39
LINC01238-202ENST00000426962 SOWAHBA6NEL2 793 aa12.6□□□□□ -0.39
LINC01238-202ENST00000426962 SLC34A2O95436 690 aa12.6□□□□□ -0.39
LINC01238-202ENST00000426962 GOLGA8HP0CJ92 632 aa12.6□□□□□ -0.39
LINC01238-202ENST00000426962 ADCYAP1R1P41586 468 aa12.6□□□□□ -0.39
LINC01238-202ENST00000426962 ASPRV1Q53RT3 343 aa12.6□□□□□ -0.39
LINC01238-202ENST00000426962 NSMFQ6X4W1 530 aa12.6□□□□□ -0.39
LINC01238-202ENST00000426962 SLC39A5Q6ZMH5 540 aa12.6□□□□□ -0.39
LINC01238-202ENST00000426962 CYB5R4Q7L1T6 521 aa12.6□□□□□ -0.39
LINC01238-202ENST00000426962 UBA5Q9GZZ9 404 aa12.6□□□□□ -0.39
LINC01238-202ENST00000426962 PRO3102Q9H379 93 aa12.6□□□□□ -0.39
LINC01238-202ENST00000426962 RBM27Q9P2N5 1060 aaKnown RBP12.6□□□□□ -0.39
LINC01238-202ENST00000426962 ZHX1Q9UKY1 873 aaPredicted RBP12.6□□□□□ -0.39
LINC01238-202ENST00000426962 ZMYND8Q9ULU4 1186 aaPredicted RBP12.6□□□□□ -0.39
LINC01238-202ENST00000426962 E7EWF7 191 aa12.59□□□□□ -0.39
LINC01238-202ENST00000426962 DUSP11O75319 330 aaKnown RBP12.59□□□□□ -0.39
LINC01238-202ENST00000426962 PGK1P00558 417 aa12.59□□□□□ -0.39
LINC01238-202ENST00000426962 PARP1P09874 1014 aaKnown RBP12.59□□□□□ -0.39
LINC01238-202ENST00000426962 ATN1P54259 1190 aaPredicted RBP12.59□□□□□ -0.39
LINC01238-202ENST00000426962 BAATQ14032 418 aaPredicted RBP12.59□□□□□ -0.39
LINC01238-202ENST00000426962 SEC23AQ15436 765 aa12.59□□□□□ -0.39
LINC01238-202ENST00000426962 CCDC144BQ3MJ40 725 aa12.59□□□□□ -0.39
LINC01238-202ENST00000426962 RALYLQ86SE5 291 aaKnown RBP12.59□□□□□ -0.39
LINC01238-202ENST00000426962 NCOA7Q8NI08 942 aa12.59□□□□□ -0.39
LINC01238-202ENST00000426962 PLXNA1Q9UIW2 1896 aa12.59□□□□□ -0.39
LINC01238-202ENST00000426962 WDR19Q8NEZ3 1342 aa12.59□□□□□ -0.39
LINC01238-202ENST00000426962 SMCHD1A6NHR9 2005 aa12.59□□□□□ -0.39
LINC01238-202ENST00000426962 ERICH2A1L162 156 aa12.58□□□□□ -0.4
LINC01238-202ENST00000426962 NFIBO00712 420 aa12.58□□□□□ -0.4
LINC01238-202ENST00000426962 IFIT3O14879 490 aaKnown RBP12.58□□□□□ -0.4
LINC01238-202ENST00000426962 SYN1P17600 705 aa12.58□□□□□ -0.4
LINC01238-202ENST00000426962 BMP8BP34820 402 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms