RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 CCDC122Q5T0U0 273 aa15.4■□□□□ 0.06
RPL28-202ENST00000426763 CYP26C1Q6V0L0 522 aa15.4■□□□□ 0.06
RPL28-202ENST00000426763 TSNARE1Q96NA8 513 aa15.4■□□□□ 0.06
RPL28-202ENST00000426763 TDRD3Q9H7E2 651 aaKnown RBP15.4■□□□□ 0.06
RPL28-202ENST00000426763 RFX7Q2KHR2 1363 aa15.4■□□□□ 0.06
RPL28-202ENST00000426763 KRT19P08727 400 aa15.4■□□□□ 0.06
RPL28-202ENST00000426763 NECTIN1Q15223 517 aa15.4■□□□□ 0.06
RPL28-202ENST00000426763 ZNF569Q5MCW4 686 aa15.4■□□□□ 0.06
RPL28-202ENST00000426763 MAGEF1Q9HAY2 307 aa15.4■□□□□ 0.06
RPL28-202ENST00000426763 GOLGA1Q92805 767 aa15.4■□□□□ 0.06
RPL28-202ENST00000426763 PANK4Q9NVE7 773 aa15.4■□□□□ 0.06
RPL28-202ENST00000426763 RNF181Q9P0P0 153 aa15.4■□□□□ 0.06
RPL28-202ENST00000426763 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.4■□□□□ 0.06
RPL28-202ENST00000426763 PABPN1LA6NDY0 278 aaKnown RBP15.39■□□□□ 0.05
RPL28-202ENST00000426763 GTPBP6O43824 516 aaPredicted RBP15.39■□□□□ 0.05
RPL28-202ENST00000426763 CACNB3P54284 484 aa15.39■□□□□ 0.05
RPL28-202ENST00000426763 MAP2K1Q02750 393 aaPredicted RBP15.39■□□□□ 0.05
RPL28-202ENST00000426763 HS1BP3Q53T59 392 aa15.39■□□□□ 0.05
RPL28-202ENST00000426763 CDHR1Q96JP9 859 aa15.39■□□□□ 0.05
RPL28-202ENST00000426763 ZNF577Q9BSK1 485 aa15.39■□□□□ 0.05
RPL28-202ENST00000426763 KIAA1468Q9P260 1216 aa15.39■□□□□ 0.05
RPL28-202ENST00000426763 LIG4P49917 911 aa15.39■□□□□ 0.05
RPL28-202ENST00000426763 SLC9C1Q4G0N8 1177 aa15.39■□□□□ 0.05
RPL28-202ENST00000426763 ATP6V0A1Q93050 837 aa15.39■□□□□ 0.05
RPL28-202ENST00000426763 PCDHA7Q9UN72 937 aa15.39■□□□□ 0.05
RPL28-202ENST00000426763 ATP2A1O14983 1001 aa15.39■□□□□ 0.05
RPL28-202ENST00000426763 PRPF6O94906 941 aaKnown RBP15.39■□□□□ 0.05
RPL28-202ENST00000426763 TNNI1P19237 187 aa15.39■□□□□ 0.05
RPL28-202ENST00000426763 POLGP54098 1239 aaPredicted RBP15.39■□□□□ 0.05
RPL28-202ENST00000426763 RABL6Q3YEC7 729 aaPredicted RBP15.39■□□□□ 0.05
RPL28-202ENST00000426763 FAM178BQ8IXR5 827 aa15.39■□□□□ 0.05
RPL28-202ENST00000426763 ZNF341Q9BYN7 854 aa15.39■□□□□ 0.05
RPL28-202ENST00000426763 RNF216Q9NWF9 866 aaPredicted RBP15.39■□□□□ 0.05
RPL28-202ENST00000426763 RTEL1Q9NZ71 1219 aa15.39■□□□□ 0.05
RPL28-202ENST00000426763 K7ENM7 598 aa15.39■□□□□ 0.05
RPL28-202ENST00000426763 GH2P01242 217 aa15.39■□□□□ 0.05
RPL28-202ENST00000426763 P4HA1P13674 534 aa15.39■□□□□ 0.05
RPL28-202ENST00000426763 PNMA3Q9UL41 463 aa15.39■□□□□ 0.05
RPL28-202ENST00000426763 ABT1Q9ULW3 272 aaKnown RBP15.39■□□□□ 0.05
RPL28-202ENST00000426763 SF3B3Q15393 1217 aaKnown RBP15.38■□□□□ 0.05
RPL28-202ENST00000426763 TRIML1Q8N9V2 468 aa15.38■□□□□ 0.05
RPL28-202ENST00000426763 WDR11Q9BZH6 1224 aa15.38■□□□□ 0.05
RPL28-202ENST00000426763 RBSNQ9H1K0 784 aa15.38■□□□□ 0.05
RPL28-202ENST00000426763 MTUS1Q9ULD2 1270 aa15.38■□□□□ 0.05
RPL28-202ENST00000426763 CLIC4Q9Y696 253 aa15.38■□□□□ 0.05
RPL28-202ENST00000426763 CNTNAP4Q9C0A0 1308 aa15.38■□□□□ 0.05
RPL28-202ENST00000426763 CCND2P30279 289 aa15.38■□□□□ 0.05
RPL28-202ENST00000426763 CDC37Q16543 378 aaPredicted RBP15.38■□□□□ 0.05
RPL28-202ENST00000426763 PRR5LQ6MZQ0 368 aa15.38■□□□□ 0.05
RPL28-202ENST00000426763 KRBA2Q6ZNG9 492 aa15.38■□□□□ 0.05
RPL28-202ENST00000426763 APOBEC3FQ8IUX4 373 aaKnown RBP15.38■□□□□ 0.05
RPL28-202ENST00000426763 CCDC155Q8N6L0 562 aa15.38■□□□□ 0.05
RPL28-202ENST00000426763 SYMPKQ92797 1274 aaKnown RBP15.38■□□□□ 0.05
RPL28-202ENST00000426763 ADPGKQ9BRR6 497 aa15.38■□□□□ 0.05
RPL28-202ENST00000426763 SUGCTQ9HAC7 445 aa15.38■□□□□ 0.05
RPL28-202ENST00000426763 ZNF445P59923 1031 aa15.38■□□□□ 0.05
RPL28-202ENST00000426763 YWHAEP62258 255 aaKnown RBP15.38■□□□□ 0.05
RPL28-202ENST00000426763 NKX1-1Q15270 411 aaPredicted RBP15.38■□□□□ 0.05
RPL28-202ENST00000426763 CTR9Q6PD62 1173 aa15.38■□□□□ 0.05
RPL28-202ENST00000426763 DCAF4Q8WV16 495 aa15.38■□□□□ 0.05
RPL28-202ENST00000426763 IQCDQ96DY2 449 aa15.38■□□□□ 0.05
RPL28-202ENST00000426763 DMP1Q13316 513 aaPredicted RBP15.38■□□□□ 0.05
RPL28-202ENST00000426763 SEL1L2Q5TEA6 688 aa15.38■□□□□ 0.05
RPL28-202ENST00000426763 C2orf69Q8N8R5 385 aa15.38■□□□□ 0.05
RPL28-202ENST00000426763 FAM84BQ96KN1 310 aaPredicted RBP15.38■□□□□ 0.05
RPL28-202ENST00000426763 AK8Q96MA6 479 aa15.38■□□□□ 0.05
RPL28-202ENST00000426763 MAK16Q9BXY0 300 aaKnown RBP15.38■□□□□ 0.05
RPL28-202ENST00000426763 PNMA6FA0A0J9YX94 578 aa15.37■□□□□ 0.05
RPL28-202ENST00000426763 KRT9P35527 623 aa15.37■□□□□ 0.05
RPL28-202ENST00000426763 UBXN2AP68543 259 aa15.37■□□□□ 0.05
RPL28-202ENST00000426763 COA7Q96BR5 231 aa15.37■□□□□ 0.05
RPL28-202ENST00000426763 CUEDC2Q9H467 287 aa15.37■□□□□ 0.05
RPL28-202ENST00000426763 SHTN1A0MZ66 631 aa15.37■□□□□ 0.05
RPL28-202ENST00000426763 MMP1P03956 469 aa15.37■□□□□ 0.05
RPL28-202ENST00000426763 TRMT44Q8IYL2 757 aaKnown RBP15.37■□□□□ 0.05
RPL28-202ENST00000426763 RASGRP4Q8TDF6 673 aa15.37■□□□□ 0.05
RPL28-202ENST00000426763 TBCKQ8TEA7 893 aa15.37■□□□□ 0.05
RPL28-202ENST00000426763 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.37■□□□□ 0.05
RPL28-202ENST00000426763 SUGT1Q9Y2Z0 365 aa15.37■□□□□ 0.05
RPL28-202ENST00000426763 PPP6R2O75170 966 aa15.37■□□□□ 0.05
RPL28-202ENST00000426763 CYP4A11Q02928 519 aa15.37■□□□□ 0.05
RPL28-202ENST00000426763 SLC39A14Q15043 492 aa15.37■□□□□ 0.05
RPL28-202ENST00000426763 CLIC6Q96NY7 704 aa15.37■□□□□ 0.05
RPL28-202ENST00000426763 AP5M1Q9H0R1 490 aa15.37■□□□□ 0.05
RPL28-202ENST00000426763 ITSN1Q15811 1721 aa15.37■□□□□ 0.05
RPL28-202ENST00000426763 HSF2BPO75031 334 aa15.37■□□□□ 0.05
RPL28-202ENST00000426763 CHRNA5P30532 468 aa15.37■□□□□ 0.05
RPL28-202ENST00000426763 CYP2J2P51589 502 aa15.37■□□□□ 0.05
RPL28-202ENST00000426763 JPH2Q9BR39 696 aaPredicted RBP15.37■□□□□ 0.05
RPL28-202ENST00000426763 RIPOR2Q9Y4F9 1068 aa15.37■□□□□ 0.05
RPL28-202ENST00000426763 SPOPO43791 374 aa15.37■□□□□ 0.05
RPL28-202ENST00000426763 TUBB4BP68371 445 aa15.37■□□□□ 0.05
RPL28-202ENST00000426763 RDH13Q8NBN7 331 aa15.37■□□□□ 0.05
RPL28-202ENST00000426763 NUCKS1Q9H1E3 243 aaKnown RBP15.37■□□□□ 0.05
RPL28-202ENST00000426763 ADGRB1O14514 1584 aa15.36■□□□□ 0.05
RPL28-202ENST00000426763 PSDA5PKW4 1024 aaPredicted RBP15.36■□□□□ 0.05
RPL28-202ENST00000426763 XRCC5P13010 732 aaKnown RBP15.36■□□□□ 0.05
RPL28-202ENST00000426763 ZNF75DP51815 510 aa15.36■□□□□ 0.05
RPL28-202ENST00000426763 CCDC77Q9BR77 488 aa15.36■□□□□ 0.05
RPL28-202ENST00000426763 IMPACTQ9P2X3 320 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms