RNA–Protein interactions for RNA: ENST00000425688.1

AC009495.3-201, humanhuman

TSL 3 BASIC

Gene AC009495.3, Length 779 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009495.3-201ENST00000425688 DCP1AQ9NPI6 582 aaPredicted RBP8.88□□□□□ -0.99
AC009495.3-201ENST00000425688 PRDM5Q9NQX1 630 aaPredicted RBP8.88□□□□□ -0.99
AC009495.3-201ENST00000425688 ARPP21Q9UBL0 812 aaPredicted RBP8.88□□□□□ -0.99
AC009495.3-201ENST00000425688 CHD7Q9P2D1 2997 aa8.88□□□□□ -0.99
AC009495.3-201ENST00000425688 MYH2Q9UKX2 1941 aa8.88□□□□□ -0.99
AC009495.3-201ENST00000425688 TPRP12270 2363 aaKnown RBP8.87□□□□□ -0.99
AC009495.3-201ENST00000425688 K7ELQ4 463 aaPredicted RBP8.87□□□□□ -0.99
AC009495.3-201ENST00000425688 FGRP09769 529 aa8.87□□□□□ -0.99
AC009495.3-201ENST00000425688 USP5P45974 858 aa8.87□□□□□ -0.99
AC009495.3-201ENST00000425688 CRKP46108 304 aa8.87□□□□□ -0.99
AC009495.3-201ENST00000425688 TRDNQ13061 729 aa8.87□□□□□ -0.99
AC009495.3-201ENST00000425688 APOBEC3HQ6NTF7 200 aaKnown RBP8.87□□□□□ -0.99
AC009495.3-201ENST00000425688 GPAT2Q6NUI2 795 aa8.87□□□□□ -0.99
AC009495.3-201ENST00000425688 NCOA7Q8NI08 942 aa8.87□□□□□ -0.99
AC009495.3-201ENST00000425688 SH3RF3Q8TEJ3 882 aaPredicted RBP8.87□□□□□ -0.99
AC009495.3-201ENST00000425688 SDR42E1Q8WUS8 393 aa8.87□□□□□ -0.99
AC009495.3-201ENST00000425688 STAG1Q8WVM7 1258 aa8.87□□□□□ -0.99
AC009495.3-201ENST00000425688 TRIB2Q92519 343 aa8.87□□□□□ -0.99
AC009495.3-201ENST00000425688 MTA3Q9BTC8 594 aa8.87□□□□□ -0.99
AC009495.3-201ENST00000425688 TMEM39BQ9GZU3 492 aa8.87□□□□□ -0.99
AC009495.3-201ENST00000425688 CD320Q9NPF0 282 aa8.87□□□□□ -0.99
AC009495.3-201ENST00000425688 PDRG1Q9NUG6 133 aa8.87□□□□□ -0.99
AC009495.3-201ENST00000425688 ZNF70Q9UC06 446 aaPredicted RBP8.87□□□□□ -0.99
AC009495.3-201ENST00000425688 LRRC37A2A6NM11 1700 aa8.86□□□□□ -0.99
AC009495.3-201ENST00000425688 F8W031 263 aaPredicted RBP8.86□□□□□ -0.99
AC009495.3-201ENST00000425688 GFRA3O60609 400 aa8.86□□□□□ -0.99
AC009495.3-201ENST00000425688 SLC3A2P08195 630 aaKnown RBP8.86□□□□□ -0.99
AC009495.3-201ENST00000425688 MCM5P33992 734 aa8.86□□□□□ -0.99
AC009495.3-201ENST00000425688 EPHB4P54760 987 aa8.86□□□□□ -0.99
AC009495.3-201ENST00000425688 EXOSC10Q01780 885 aaKnown RBP8.86□□□□□ -0.99
AC009495.3-201ENST00000425688 PPARAQ07869 468 aa8.86□□□□□ -0.99
AC009495.3-201ENST00000425688 SKIV2LQ15477 1246 aaKnown RBP8.86□□□□□ -0.99
AC009495.3-201ENST00000425688 CTR9Q6PD62 1173 aa8.86□□□□□ -0.99
AC009495.3-201ENST00000425688 STOX1Q6ZVD7 989 aa8.86□□□□□ -0.99
AC009495.3-201ENST00000425688 RALYLQ86SE5 291 aaKnown RBP8.86□□□□□ -0.99
AC009495.3-201ENST00000425688 AMOTL1Q8IY63 956 aa8.86□□□□□ -0.99
AC009495.3-201ENST00000425688 TEX11Q8IYF3 940 aa8.86□□□□□ -0.99
AC009495.3-201ENST00000425688 MICALL1Q8N3F8 863 aa8.86□□□□□ -0.99
AC009495.3-201ENST00000425688 ZSCAN31Q96LW9 406 aaPredicted RBP8.86□□□□□ -0.99
AC009495.3-201ENST00000425688 AGXT2Q9BYV1 514 aa8.86□□□□□ -0.99
AC009495.3-201ENST00000425688 UPF3BQ9BZI7 483 aaKnown RBP8.86□□□□□ -0.99
AC009495.3-201ENST00000425688 KRT23Q9C075 422 aa8.86□□□□□ -0.99
AC009495.3-201ENST00000425688 LIMCH1Q9UPQ0 1083 aa8.86□□□□□ -0.99
AC009495.3-201ENST00000425688 ATP11BQ9Y2G3 1177 aa8.86□□□□□ -0.99
AC009495.3-201ENST00000425688 TAF6LQ9Y6J9 622 aa8.86□□□□□ -0.99
AC009495.3-201ENST00000425688 LAMA4Q16363 1823 aa8.86□□□□□ -0.99
AC009495.3-201ENST00000425688 CFAP47Q6ZTR5 3102 aa8.85□□□□□ -0.99
AC009495.3-201ENST00000425688 USP17L12C9JPN9 530 aa8.85□□□□□ -0.99
AC009495.3-201ENST00000425688 USP17L21D6R901 530 aa8.85□□□□□ -0.99
AC009495.3-201ENST00000425688 ORC4O43929 436 aa8.85□□□□□ -0.99
AC009495.3-201ENST00000425688 CD2BP2O95400 341 aaKnown RBP8.85□□□□□ -0.99
AC009495.3-201ENST00000425688 RBM5P52756 815 aaKnown RBP eCLIP8.85□□□□□ -0.99
AC009495.3-201ENST00000425688 AK2P54819 239 aa8.85□□□□□ -0.99
AC009495.3-201ENST00000425688 HAND2P61296 217 aa8.85□□□□□ -0.99
AC009495.3-201ENST00000425688 C12orf60Q5U649 245 aa8.85□□□□□ -0.99
AC009495.3-201ENST00000425688 FKBP1CQ5VVH2 108 aa8.85□□□□□ -0.99
AC009495.3-201ENST00000425688 CDC42EP5Q6NZY7 148 aa8.85□□□□□ -0.99
AC009495.3-201ENST00000425688 MFSD6Q6ZSS7 791 aa8.85□□□□□ -0.99
AC009495.3-201ENST00000425688 TBC1D10CQ8IV04 446 aa8.85□□□□□ -0.99
AC009495.3-201ENST00000425688 MB21D2Q8IYB1 491 aaPredicted RBP8.85□□□□□ -0.99
AC009495.3-201ENST00000425688 TGFBRAP1Q8WUH2 860 aa8.85□□□□□ -0.99
AC009495.3-201ENST00000425688 HERVK_113Q902F9 699 aa8.85□□□□□ -0.99
AC009495.3-201ENST00000425688 CHMP4CQ96CF2 233 aa8.85□□□□□ -0.99
AC009495.3-201ENST00000425688 IDI2Q9BXS1 227 aa8.85□□□□□ -0.99
AC009495.3-201ENST00000425688 PBX4Q9BYU1 374 aa8.85□□□□□ -0.99
AC009495.3-201ENST00000425688 ZNF287Q9HBT7 754 aa8.85□□□□□ -0.99
AC009495.3-201ENST00000425688 SH2B1Q9NRF2 756 aaPredicted RBP8.85□□□□□ -0.99
AC009495.3-201ENST00000425688 USP40Q9NVE5 1235 aa8.85□□□□□ -0.99
AC009495.3-201ENST00000425688 MCM9Q9NXL9 1143 aa8.85□□□□□ -0.99
AC009495.3-201ENST00000425688 PLA2G2EQ9NZK7 142 aa8.85□□□□□ -0.99
AC009495.3-201ENST00000425688 SEPT9Q9UHD8 586 aaPredicted RBP8.85□□□□□ -0.99
AC009495.3-201ENST00000425688 GJD2Q9UKL4 321 aa8.85□□□□□ -0.99
AC009495.3-201ENST00000425688 ROBO3Q96MS0 1386 aa8.85□□□□□ -0.99
AC009495.3-201ENST00000425688 FLT1P17948 1338 aa8.84□□□□□ -0.99
AC009495.3-201ENST00000425688 CHD6Q8TD26 2715 aa8.84□□□□□ -0.99
AC009495.3-201ENST00000425688 MINDY4BA8MYZ0 360 aa8.84□□□□□ -0.99
AC009495.3-201ENST00000425688 TCP10L2B9ZVM9 353 aa8.84□□□□□ -0.99
AC009495.3-201ENST00000425688 EVCP57679 992 aa8.84□□□□□ -0.99
AC009495.3-201ENST00000425688 PDE4BQ07343 736 aa8.84□□□□□ -0.99
AC009495.3-201ENST00000425688 CUL4AQ13619 759 aa8.84□□□□□ -0.99
AC009495.3-201ENST00000425688 KCTD2Q14681 263 aa8.84□□□□□ -0.99
AC009495.3-201ENST00000425688 SH3RF1Q7Z6J0 888 aa8.84□□□□□ -0.99
AC009495.3-201ENST00000425688 TTC6Q86TZ1 520 aa8.84□□□□□ -0.99
AC009495.3-201ENST00000425688 SMCR8Q8TEV9 937 aaPredicted RBP8.84□□□□□ -0.99
AC009495.3-201ENST00000425688 ESR2Q92731 530 aa8.84□□□□□ -0.99
AC009495.3-201ENST00000425688 INTS4Q96HW7 963 aaKnown RBP8.84□□□□□ -0.99
AC009495.3-201ENST00000425688 TMEM87BQ96K49 555 aa8.84□□□□□ -0.99
AC009495.3-201ENST00000425688 DHX36Q9H2U1 1008 aaKnown RBP8.84□□□□□ -0.99
AC009495.3-201ENST00000425688 TDRD3Q9H7E2 651 aaKnown RBP8.84□□□□□ -0.99
AC009495.3-201ENST00000425688 CDHR5Q9HBB8 845 aa8.84□□□□□ -0.99
AC009495.3-201ENST00000425688 PDLIM7Q9NR12 457 aa8.84□□□□□ -0.99
AC009495.3-201ENST00000425688 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.84□□□□□ -0.99
AC009495.3-201ENST00000425688 TRIM43BA6NCK2 446 aa8.83□□□□□ -1
AC009495.3-201ENST00000425688 PRC1O43663 620 aa8.83□□□□□ -1
AC009495.3-201ENST00000425688 ENTPD3O75355 529 aa8.83□□□□□ -1
AC009495.3-201ENST00000425688 ALADP13716 330 aa8.83□□□□□ -1
AC009495.3-201ENST00000425688 CPA1P15085 419 aa8.83□□□□□ -1
AC009495.3-201ENST00000425688 MLLT3P42568 568 aaPredicted RBP8.83□□□□□ -1
AC009495.3-201ENST00000425688 TNNI2P48788 182 aa8.83□□□□□ -1
AC009495.3-201ENST00000425688 CTDSPL2Q05D32 466 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms