RNA–Protein interactions for RNA: ENST00000424754.5

NCSTN-205, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-205ENST00000424754 GPATCH4Q5T3I0 446 aaKnown RBP10.9□□□□□ -0.66
NCSTN-205ENST00000424754 IFIT1BQ5T764 474 aaKnown RBP10.9□□□□□ -0.66
NCSTN-205ENST00000424754 SKAP1Q86WV1 359 aa10.9□□□□□ -0.66
NCSTN-205ENST00000424754 PNMA1Q8ND90 353 aa10.9□□□□□ -0.66
NCSTN-205ENST00000424754 UNC93B1Q9H1C4 597 aa10.9□□□□□ -0.66
NCSTN-205ENST00000424754 SLC38A10Q9HBR0 1119 aa10.9□□□□□ -0.66
NCSTN-205ENST00000424754 RAVER2Q9HCJ3 691 aaKnown RBP10.9□□□□□ -0.66
NCSTN-205ENST00000424754 GPCPD1Q9NPB8 672 aa10.9□□□□□ -0.66
NCSTN-205ENST00000424754 PNMA2Q9UL42 364 aa10.9□□□□□ -0.66
NCSTN-205ENST00000424754 ZNF214Q9UL59 606 aaPredicted RBP10.9□□□□□ -0.66
NCSTN-205ENST00000424754 MGAMO43451 1857 aa10.89□□□□□ -0.67
NCSTN-205ENST00000424754 FRMPD2Q68DX3 1309 aaPredicted RBP10.89□□□□□ -0.67
NCSTN-205ENST00000424754 ZSWIM8A7E2V4 1837 aa10.89□□□□□ -0.67
NCSTN-205ENST00000424754 POTEFA5A3E0 1075 aa10.89□□□□□ -0.67
NCSTN-205ENST00000424754 E7EWF7 191 aa10.89□□□□□ -0.67
NCSTN-205ENST00000424754 IFIT3O14879 490 aaKnown RBP10.89□□□□□ -0.67
NCSTN-205ENST00000424754 HOXC6P09630 235 aa10.89□□□□□ -0.67
NCSTN-205ENST00000424754 EN2P19622 333 aaPredicted RBP10.89□□□□□ -0.67
NCSTN-205ENST00000424754 TKFCQ3LXA3 575 aa10.89□□□□□ -0.67
NCSTN-205ENST00000424754 ANKRD35Q8N283 1001 aa10.89□□□□□ -0.67
NCSTN-205ENST00000424754 CHST13Q8NET6 341 aa10.89□□□□□ -0.67
NCSTN-205ENST00000424754 TRIB2Q92519 343 aa10.89□□□□□ -0.67
NCSTN-205ENST00000424754 USP6NLQ92738 828 aa10.89□□□□□ -0.67
NCSTN-205ENST00000424754 PRR12Q9ULL5 1215 aa10.89□□□□□ -0.67
NCSTN-205ENST00000424754 COLQQ9Y215 455 aaPredicted RBP10.89□□□□□ -0.67
NCSTN-205ENST00000424754 GREB1LQ9C091 1923 aaPredicted RBP10.89□□□□□ -0.67
NCSTN-205ENST00000424754 DHX16O60231 1041 aaKnown RBP10.88□□□□□ -0.67
NCSTN-205ENST00000424754 SGPL1O95470 568 aa10.88□□□□□ -0.67
NCSTN-205ENST00000424754 PDHBP11177 359 aa10.88□□□□□ -0.67
NCSTN-205ENST00000424754 CNGA1P29973 690 aa10.88□□□□□ -0.67
NCSTN-205ENST00000424754 GJA8P48165 433 aa10.88□□□□□ -0.67
NCSTN-205ENST00000424754 WTAPQ15007 396 aa10.88□□□□□ -0.67
NCSTN-205ENST00000424754 SYDE2Q5VT97 1194 aa10.88□□□□□ -0.67
NCSTN-205ENST00000424754 CCDC174Q6PII3 467 aa10.88□□□□□ -0.67
NCSTN-205ENST00000424754 ENAHQ8N8S7 591 aaPredicted RBP10.88□□□□□ -0.67
NCSTN-205ENST00000424754 REPS2Q8NFH8 660 aa10.88□□□□□ -0.67
NCSTN-205ENST00000424754 U2AF1L4Q8WU68 220 aaKnown RBP10.88□□□□□ -0.67
NCSTN-205ENST00000424754 ANKS1AQ92625 1134 aa10.88□□□□□ -0.67
NCSTN-205ENST00000424754 DEFB118Q96PH6 123 aa10.88□□□□□ -0.67
NCSTN-205ENST00000424754 LSG1Q9H089 658 aaKnown RBP10.88□□□□□ -0.67
NCSTN-205ENST00000424754 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.88□□□□□ -0.67
NCSTN-205ENST00000424754 MYH4Q9Y623 1939 aa10.88□□□□□ -0.67
NCSTN-205ENST00000424754 REC8O95072 547 aa10.87□□□□□ -0.67
NCSTN-205ENST00000424754 PARP1P09874 1014 aaKnown RBP10.87□□□□□ -0.67
NCSTN-205ENST00000424754 ALAS1P13196 640 aa10.87□□□□□ -0.67
NCSTN-205ENST00000424754 MCM5P33992 734 aa10.87□□□□□ -0.67
NCSTN-205ENST00000424754 SLC16A2P36021 539 aa10.87□□□□□ -0.67
NCSTN-205ENST00000424754 CACNB2Q08289 660 aaPredicted RBP10.87□□□□□ -0.67
NCSTN-205ENST00000424754 ZNF543Q08ER8 600 aa10.87□□□□□ -0.67
NCSTN-205ENST00000424754 CCL14Q16627 93 aa10.87□□□□□ -0.67
NCSTN-205ENST00000424754 ASPRV1Q53RT3 343 aa10.87□□□□□ -0.67
NCSTN-205ENST00000424754 TMEM67Q5HYA8 995 aa10.87□□□□□ -0.67
NCSTN-205ENST00000424754 OLFML2BQ68BL8 750 aa10.87□□□□□ -0.67
NCSTN-205ENST00000424754 CREB3L3Q68CJ9 461 aa10.87□□□□□ -0.67
NCSTN-205ENST00000424754 TTBK2Q6IQ55 1244 aa10.87□□□□□ -0.67
NCSTN-205ENST00000424754 BTNL9Q6UXG8 535 aa10.87□□□□□ -0.67
NCSTN-205ENST00000424754 CATIPQ7Z7H3 387 aa10.87□□□□□ -0.67
NCSTN-205ENST00000424754 TMTC2Q8N394 836 aa10.87□□□□□ -0.67
NCSTN-205ENST00000424754 NPLOC4Q8TAT6 608 aa10.87□□□□□ -0.67
NCSTN-205ENST00000424754 TRERF1Q96PN7 1200 aa10.87□□□□□ -0.67
NCSTN-205ENST00000424754 ACAD9Q9H845 621 aa10.87□□□□□ -0.67
NCSTN-205ENST00000424754 HOMER2Q9NSB8 354 aa10.87□□□□□ -0.67
NCSTN-205ENST00000424754 CCPG1Q9ULG6 757 aa10.87□□□□□ -0.67
NCSTN-205ENST00000424754 DIS3Q9Y2L1 958 aaKnown RBP10.87□□□□□ -0.67
NCSTN-205ENST00000424754 SLC27A2O14975 620 aa10.86□□□□□ -0.67
NCSTN-205ENST00000424754 MSCO60682 206 aa10.86□□□□□ -0.67
NCSTN-205ENST00000424754 ICAM1P05362 532 aa10.86□□□□□ -0.67
NCSTN-205ENST00000424754 PGK2P07205 417 aa10.86□□□□□ -0.67
NCSTN-205ENST00000424754 CHRM1P11229 460 aaPredicted RBP10.86□□□□□ -0.67
NCSTN-205ENST00000424754 TRIM32Q13049 653 aa10.86□□□□□ -0.67
NCSTN-205ENST00000424754 KRT32Q14532 448 aa10.86□□□□□ -0.67
NCSTN-205ENST00000424754 NFXL1Q6ZNB6 911 aa10.86□□□□□ -0.67
NCSTN-205ENST00000424754 CYB5R4Q7L1T6 521 aa10.86□□□□□ -0.67
NCSTN-205ENST00000424754 MAML3Q96JK9 1138 aa10.86□□□□□ -0.67
NCSTN-205ENST00000424754 AGBL1Q96MI9 1066 aa10.86□□□□□ -0.67
NCSTN-205ENST00000424754 MTA3Q9BTC8 594 aa10.86□□□□□ -0.67
NCSTN-205ENST00000424754 PAK6Q9NQU5 681 aaPredicted RBP10.86□□□□□ -0.67
NCSTN-205ENST00000424754 RNF146Q9NTX7 359 aa10.86□□□□□ -0.67
NCSTN-205ENST00000424754 CNPY2Q9Y2B0 182 aa10.86□□□□□ -0.67
NCSTN-205ENST00000424754 RIPK3Q9Y572 518 aa10.86□□□□□ -0.67
NCSTN-205ENST00000424754 CCDC69A6NI79 296 aa10.85□□□□□ -0.67
NCSTN-205ENST00000424754 EIF5BO60841 1220 aaKnown RBP10.85□□□□□ -0.67
NCSTN-205ENST00000424754 COBLO75128 1261 aa10.85□□□□□ -0.67
NCSTN-205ENST00000424754 GOLGA8HP0CJ92 632 aa10.85□□□□□ -0.67
NCSTN-205ENST00000424754 SNHG28P0DPA3 235 aa10.85□□□□□ -0.67
NCSTN-205ENST00000424754 CYP2C19P33261 490 aa10.85□□□□□ -0.67
NCSTN-205ENST00000424754 SNAP25P60880 206 aa10.85□□□□□ -0.67
NCSTN-205ENST00000424754 TRAF1Q13077 416 aa10.85□□□□□ -0.67
NCSTN-205ENST00000424754 NECTIN1Q15223 517 aa10.85□□□□□ -0.67
NCSTN-205ENST00000424754 MAP3K21Q5TCX8 1036 aa10.85□□□□□ -0.67
NCSTN-205ENST00000424754 SYNE3Q6ZMZ3 975 aa10.85□□□□□ -0.67
NCSTN-205ENST00000424754 CHST3Q7LGC8 479 aa10.85□□□□□ -0.67
NCSTN-205ENST00000424754 TMEM87BQ96K49 555 aa10.85□□□□□ -0.67
NCSTN-205ENST00000424754 HTATIP2Q9BUP3 242 aa10.85□□□□□ -0.67
NCSTN-205ENST00000424754 UBA5Q9GZZ9 404 aa10.85□□□□□ -0.67
NCSTN-205ENST00000424754 RANBP17Q9H2T7 1088 aaKnown RBP10.85□□□□□ -0.67
NCSTN-205ENST00000424754 VAT1LQ9HCJ6 419 aa10.85□□□□□ -0.67
NCSTN-205ENST00000424754 PFASO15067 1338 aa10.84□□□□□ -0.67
NCSTN-205ENST00000424754 KLRF2D3W0D1 207 aa10.84□□□□□ -0.67
NCSTN-205ENST00000424754 PRC1O43663 620 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms