RNA–Protein interactions for RNA: ENST00000424408.6

LAMA4-207, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LAMA4, Length 5,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-207ENST00000424408 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.22□□□□□ -0.29
LAMA4-207ENST00000424408 NSFL1CQ9UNZ2 370 aaKnown RBP13.22□□□□□ -0.29
LAMA4-207ENST00000424408 ORC6Q9Y5N6 252 aa13.22□□□□□ -0.29
LAMA4-207ENST00000424408 PIK3C2GO75747 1445 aa13.21□□□□□ -0.29
LAMA4-207ENST00000424408 KDM3AQ9Y4C1 1321 aa13.21□□□□□ -0.29
LAMA4-207ENST00000424408 ITGA6P23229 1130 aa13.21□□□□□ -0.29
LAMA4-207ENST00000424408 KIF22Q14807 665 aa13.21□□□□□ -0.29
LAMA4-207ENST00000424408 PUM3Q15397 648 aaKnown RBP13.21□□□□□ -0.29
LAMA4-207ENST00000424408 TDRD7Q8NHU6 1098 aaKnown RBP13.21□□□□□ -0.29
LAMA4-207ENST00000424408 GPC4O75487 556 aa13.21□□□□□ -0.29
LAMA4-207ENST00000424408 TECP42680 631 aa13.21□□□□□ -0.29
LAMA4-207ENST00000424408 ARHGEF18Q6ZSZ5 1173 aa13.21□□□□□ -0.29
LAMA4-207ENST00000424408 NOSTRINQ8IVI9 506 aa13.21□□□□□ -0.29
LAMA4-207ENST00000424408 CMTR1Q8N1G2 835 aaKnown RBP13.21□□□□□ -0.29
LAMA4-207ENST00000424408 LRRC59Q96AG4 307 aaKnown RBP13.21□□□□□ -0.29
LAMA4-207ENST00000424408 ZNF594Q96JF6 807 aaPredicted RBP13.21□□□□□ -0.29
LAMA4-207ENST00000424408 NT5C3AQ9H0P0 336 aa13.21□□□□□ -0.29
LAMA4-207ENST00000424408 CNOT10Q9H9A5 744 aaKnown RBP13.21□□□□□ -0.29
LAMA4-207ENST00000424408 DKC1O60832 514 aaKnown RBP eCLIP13.21□□□□□ -0.29
LAMA4-207ENST00000424408 GYS2P54840 703 aa13.21□□□□□ -0.29
LAMA4-207ENST00000424408 TTBK2Q6IQ55 1244 aa13.21□□□□□ -0.29
LAMA4-207ENST00000424408 KRT80Q6KB66 452 aa13.21□□□□□ -0.29
LAMA4-207ENST00000424408 MMS22LQ6ZRQ5 1243 aa13.21□□□□□ -0.29
LAMA4-207ENST00000424408 AATFQ9NY61 560 aaKnown RBP eCLIP13.21□□□□□ -0.29
LAMA4-207ENST00000424408 TPCN1Q9ULQ1 816 aa13.21□□□□□ -0.29
LAMA4-207ENST00000424408 PNMA6EA0A0J9YXQ4 647 aa13.21□□□□□ -0.3
LAMA4-207ENST00000424408 H2AFZP0C0S5 128 aa13.21□□□□□ -0.3
LAMA4-207ENST00000424408 YWHAEP62258 255 aaKnown RBP13.21□□□□□ -0.3
LAMA4-207ENST00000424408 PPP2R5BQ15173 497 aa13.21□□□□□ -0.3
LAMA4-207ENST00000424408 H2AFVQ71UI9 128 aa13.21□□□□□ -0.3
LAMA4-207ENST00000424408 ARMC9Q7Z3E5 817 aa13.21□□□□□ -0.3
LAMA4-207ENST00000424408 KBTBD3Q8NAB2 608 aa13.21□□□□□ -0.3
LAMA4-207ENST00000424408 YIPF3Q9GZM5 350 aa13.21□□□□□ -0.3
LAMA4-207ENST00000424408 SH2D4AQ9H788 454 aa13.21□□□□□ -0.3
LAMA4-207ENST00000424408 TRIM37O94972 964 aa13.2□□□□□ -0.3
LAMA4-207ENST00000424408 IDI1Q13907 227 aa13.2□□□□□ -0.3
LAMA4-207ENST00000424408 ICE2Q659A1 982 aa13.2□□□□□ -0.3
LAMA4-207ENST00000424408 TBC1D1Q86TI0 1168 aaPredicted RBP13.2□□□□□ -0.3
LAMA4-207ENST00000424408 RIOK1Q9BRS2 568 aaKnown RBP13.2□□□□□ -0.3
LAMA4-207ENST00000424408 IBTKQ9P2D0 1353 aaPredicted RBP13.2□□□□□ -0.3
LAMA4-207ENST00000424408 GOLGA8QA0A0J9YX86 632 aa13.2□□□□□ -0.3
LAMA4-207ENST00000424408 GOLGA8OA6NCC3 632 aa13.2□□□□□ -0.3
LAMA4-207ENST00000424408 GOLGA8NF8WBI6 632 aa13.2□□□□□ -0.3
LAMA4-207ENST00000424408 SLCO1A2P46721 670 aa13.2□□□□□ -0.3
LAMA4-207ENST00000424408 ZNF449Q6P9G9 518 aa13.2□□□□□ -0.3
LAMA4-207ENST00000424408 ZC3H12CQ9C0D7 883 aaKnown RBP13.2□□□□□ -0.3
LAMA4-207ENST00000424408 SCHIP1Q9P0W5 487 aaPredicted RBP13.2□□□□□ -0.3
LAMA4-207ENST00000424408 NOVA2Q9UNW9 492 aaKnown RBP13.2□□□□□ -0.3
LAMA4-207ENST00000424408 NR1D1P20393 614 aa13.2□□□□□ -0.3
LAMA4-207ENST00000424408 NOP53Q9NZM5 478 aaKnown RBP13.2□□□□□ -0.3
LAMA4-207ENST00000424408 SNAPC4Q5SXM2 1469 aa13.2□□□□□ -0.3
LAMA4-207ENST00000424408 SGK1O00141 431 aa13.2□□□□□ -0.3
LAMA4-207ENST00000424408 GTPBP6O43824 516 aaPredicted RBP13.2□□□□□ -0.3
LAMA4-207ENST00000424408 PLTPP55058 493 aa13.2□□□□□ -0.3
LAMA4-207ENST00000424408 SNX1Q13596 522 aa13.2□□□□□ -0.3
LAMA4-207ENST00000424408 LZTS2Q9BRK4 669 aa13.2□□□□□ -0.3
LAMA4-207ENST00000424408 TUBB6Q9BUF5 446 aa13.2□□□□□ -0.3
LAMA4-207ENST00000424408 TM6SF1Q9BZW5 370 aa13.2□□□□□ -0.3
LAMA4-207ENST00000424408 SLC39A2Q9NP94 309 aa13.2□□□□□ -0.3
LAMA4-207ENST00000424408 SLC4A7Q9Y6M7 1214 aa13.2□□□□□ -0.3
LAMA4-207ENST00000424408 MYO1CO00159 1063 aa13.2□□□□□ -0.3
LAMA4-207ENST00000424408 KRT10P13645 584 aa13.2□□□□□ -0.3
LAMA4-207ENST00000424408 TCP11X2Q5H9J9 407 aa13.2□□□□□ -0.3
LAMA4-207ENST00000424408 GRAMD4Q6IC98 578 aa13.2□□□□□ -0.3
LAMA4-207ENST00000424408 CDKL2Q92772 493 aa13.2□□□□□ -0.3
LAMA4-207ENST00000424408 MAGOHBQ96A72 148 aaKnown RBP13.2□□□□□ -0.3
LAMA4-207ENST00000424408 KDRP35968 1356 aa13.19□□□□□ -0.3
LAMA4-207ENST00000424408 ITKQ08881 620 aa13.19□□□□□ -0.3
LAMA4-207ENST00000424408 RAPH1Q70E73 1250 aa13.19□□□□□ -0.3
LAMA4-207ENST00000424408 ANKRD35Q8N283 1001 aa13.19□□□□□ -0.3
LAMA4-207ENST00000424408 CEP19Q96LK0 163 aa13.19□□□□□ -0.3
LAMA4-207ENST00000424408 DSCC1Q9BVC3 393 aa13.19□□□□□ -0.3
LAMA4-207ENST00000424408 NACA2Q9H009 215 aa13.19□□□□□ -0.3
LAMA4-207ENST00000424408 ABCB6Q9NP58 842 aa13.19□□□□□ -0.3
LAMA4-207ENST00000424408 KRT82Q9NSB4 513 aa13.19□□□□□ -0.3
LAMA4-207ENST00000424408 PACSIN2Q9UNF0 486 aaPredicted RBP13.19□□□□□ -0.3
LAMA4-207ENST00000424408 MAPKBP1O60336 1514 aa13.19□□□□□ -0.3
LAMA4-207ENST00000424408 ANKRD65E5RJM6 399 aa13.19□□□□□ -0.3
LAMA4-207ENST00000424408 MOCS3O95396 460 aa13.19□□□□□ -0.3
LAMA4-207ENST00000424408 STX1BP61266 288 aa13.19□□□□□ -0.3
LAMA4-207ENST00000424408 CASP8Q14790 479 aa13.19□□□□□ -0.3
LAMA4-207ENST00000424408 FBXO38Q6PIJ6 1188 aa13.19□□□□□ -0.3
LAMA4-207ENST00000424408 C11orf57Q6ZUT1 292 aaPredicted RBP13.19□□□□□ -0.3
LAMA4-207ENST00000424408 TRIM42Q8IWZ5 723 aa13.19□□□□□ -0.3
LAMA4-207ENST00000424408 SAAL1Q96ER3 474 aa13.19□□□□□ -0.3
LAMA4-207ENST00000424408 ARMCX3Q9UH62 379 aaPredicted RBP13.19□□□□□ -0.3
LAMA4-207ENST00000424408 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.19□□□□□ -0.3
LAMA4-207ENST00000424408 TADA3O75528 432 aa13.19□□□□□ -0.3
LAMA4-207ENST00000424408 CXCR5P32302 372 aa13.19□□□□□ -0.3
LAMA4-207ENST00000424408 HP1BP3Q5SSJ5 553 aaPredicted RBP13.19□□□□□ -0.3
LAMA4-207ENST00000424408 ARHGEF10LQ9HCE6 1279 aa13.19□□□□□ -0.3
LAMA4-207ENST00000424408 TBK1Q9UHD2 729 aa13.19□□□□□ -0.3
LAMA4-207ENST00000424408 DAAM1Q9Y4D1 1078 aa13.19□□□□□ -0.3
LAMA4-207ENST00000424408 P4HA1P13674 534 aa13.19□□□□□ -0.3
LAMA4-207ENST00000424408 GSPT1P15170 499 aaKnown RBP13.19□□□□□ -0.3
LAMA4-207ENST00000424408 DHX9Q08211 1270 aaKnown RBP13.19□□□□□ -0.3
LAMA4-207ENST00000424408 MESDQ14696 234 aa13.19□□□□□ -0.3
LAMA4-207ENST00000424408 FAM102BQ5T8I3 360 aa13.19□□□□□ -0.3
LAMA4-207ENST00000424408 TRIML2Q8N7C3 387 aa13.19□□□□□ -0.3
LAMA4-207ENST00000424408 CACTINQ8WUQ7 758 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms