RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 SPICE1Q8N0Z3 855 aa7.75□□□□□ -1.17
SDCBP-203ENST00000424270 NEK9Q8TD19 979 aa7.75□□□□□ -1.17
SDCBP-203ENST00000424270 KCNG4Q8TDN1 519 aa7.75□□□□□ -1.17
SDCBP-203ENST00000424270 NSUN4Q96CB9 384 aaKnown RBP7.75□□□□□ -1.17
SDCBP-203ENST00000424270 NEUROD6Q96NK8 337 aa7.75□□□□□ -1.17
SDCBP-203ENST00000424270 NOD1Q9Y239 953 aa7.75□□□□□ -1.17
SDCBP-203ENST00000424270 CTDP1Q9Y5B0 961 aaPredicted RBP7.75□□□□□ -1.17
SDCBP-203ENST00000424270 CHD7Q9P2D1 2997 aa7.75□□□□□ -1.17
SDCBP-203ENST00000424270 RGS20O76081 388 aa7.74□□□□□ -1.17
SDCBP-203ENST00000424270 AVPR2P30518 371 aa7.74□□□□□ -1.17
SDCBP-203ENST00000424270 RFC2P35250 354 aa7.74□□□□□ -1.17
SDCBP-203ENST00000424270 VCPP55072 806 aaKnown RBP7.74□□□□□ -1.17
SDCBP-203ENST00000424270 COL9A2Q14055 689 aaPredicted RBP7.74□□□□□ -1.17
SDCBP-203ENST00000424270 ZBTB33Q86T24 672 aa7.74□□□□□ -1.17
SDCBP-203ENST00000424270 MSL3Q8N5Y2 521 aaKnown RBP7.74□□□□□ -1.17
SDCBP-203ENST00000424270 SPATA5Q8NB90 893 aa7.74□□□□□ -1.17
SDCBP-203ENST00000424270 BANK1Q8NDB2 785 aa7.74□□□□□ -1.17
SDCBP-203ENST00000424270 PABPC5Q96DU9 382 aaKnown RBP7.74□□□□□ -1.17
SDCBP-203ENST00000424270 HINFPQ9BQA5 517 aa7.74□□□□□ -1.17
SDCBP-203ENST00000424270 SEZ6LQ9BYH1 1024 aa7.74□□□□□ -1.17
SDCBP-203ENST00000424270 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.74□□□□□ -1.17
SDCBP-203ENST00000424270 CFAP54Q96N23 3096 aa7.74□□□□□ -1.17
SDCBP-203ENST00000424270 CACNA1GO43497 2377 aa7.74□□□□□ -1.17
SDCBP-203ENST00000424270 COL4A6Q14031 1691 aa7.73□□□□□ -1.17
SDCBP-203ENST00000424270 BAIAP3O94812 1187 aa7.73□□□□□ -1.17
SDCBP-203ENST00000424270 SNAI1O95863 264 aaPredicted RBP7.73□□□□□ -1.17
SDCBP-203ENST00000424270 COPB2P35606 906 aa7.73□□□□□ -1.17
SDCBP-203ENST00000424270 STAT3P40763 770 aa7.73□□□□□ -1.17
SDCBP-203ENST00000424270 CHMP4BP1P59074 171 aa7.73□□□□□ -1.17
SDCBP-203ENST00000424270 TIMM10P62072 90 aa7.73□□□□□ -1.17
SDCBP-203ENST00000424270 TNFAIP2Q03169 654 aa7.73□□□□□ -1.17
SDCBP-203ENST00000424270 TMEM132BQ14DG7 1078 aa7.73□□□□□ -1.17
SDCBP-203ENST00000424270 SEPT2Q15019 361 aa7.73□□□□□ -1.17
SDCBP-203ENST00000424270 FSCN1Q16658 493 aaKnown RBP7.73□□□□□ -1.17
SDCBP-203ENST00000424270 ST3GAL2Q16842 350 aa7.73□□□□□ -1.17
SDCBP-203ENST00000424270 TCEAL5Q5H9L2 206 aa7.73□□□□□ -1.17
SDCBP-203ENST00000424270 MCTP2Q6DN12 878 aa7.73□□□□□ -1.17
SDCBP-203ENST00000424270 FRMD5Q7Z6J6 570 aa7.73□□□□□ -1.17
SDCBP-203ENST00000424270 TLK2Q86UE8 772 aa7.73□□□□□ -1.17
SDCBP-203ENST00000424270 MRPL38Q96DV4 380 aaKnown RBP7.73□□□□□ -1.17
SDCBP-203ENST00000424270 AGBL1Q96MI9 1066 aa7.73□□□□□ -1.17
SDCBP-203ENST00000424270 UPF3AQ9H1J1 476 aaKnown RBP7.73□□□□□ -1.17
SDCBP-203ENST00000424270 ABHD16BQ9H3Z7 469 aa7.73□□□□□ -1.17
SDCBP-203ENST00000424270 GPHNQ9NQX3 736 aaPredicted RBP7.73□□□□□ -1.17
SDCBP-203ENST00000424270 TRMT13Q9NUP7 481 aaKnown RBP7.73□□□□□ -1.17
SDCBP-203ENST00000424270 SERPINB13Q9UIV8 391 aa7.73□□□□□ -1.17
SDCBP-203ENST00000424270 TNKSO95271 1327 aa7.73□□□□□ -1.17
SDCBP-203ENST00000424270 PDS5AQ29RF7 1337 aaKnown RBP7.73□□□□□ -1.17
SDCBP-203ENST00000424270 PROB1E7EW31 1015 aa7.72□□□□□ -1.17
SDCBP-203ENST00000424270 E9PSI1 815 aa7.72□□□□□ -1.17
SDCBP-203ENST00000424270 DYNC1LI2O43237 492 aaPredicted RBP7.72□□□□□ -1.17
SDCBP-203ENST00000424270 CSPG5O95196 566 aa7.72□□□□□ -1.17
SDCBP-203ENST00000424270 IL15P40933 162 aaPredicted RBP7.72□□□□□ -1.17
SDCBP-203ENST00000424270 ERVK-21P61565 698 aa7.72□□□□□ -1.17
SDCBP-203ENST00000424270 ZXDAP98168 799 aa7.72□□□□□ -1.17
SDCBP-203ENST00000424270 PI16Q6UXB8 463 aa7.72□□□□□ -1.17
SDCBP-203ENST00000424270 ATG9AQ7Z3C6 839 aa7.72□□□□□ -1.17
SDCBP-203ENST00000424270 TTC6Q86TZ1 520 aa7.72□□□□□ -1.17
SDCBP-203ENST00000424270 RPAINQ86UA6 219 aa7.72□□□□□ -1.17
SDCBP-203ENST00000424270 RIOX2Q8IUF8 465 aa7.72□□□□□ -1.17
SDCBP-203ENST00000424270 MIER1Q8N108 512 aa7.72□□□□□ -1.17
SDCBP-203ENST00000424270 ANKRD35Q8N283 1001 aa7.72□□□□□ -1.17
SDCBP-203ENST00000424270 ZNF384Q8TF68 577 aa7.72□□□□□ -1.17
SDCBP-203ENST00000424270 COL26A1Q96A83 441 aa7.72□□□□□ -1.17
SDCBP-203ENST00000424270 CHAMP1Q96JM3 812 aa7.72□□□□□ -1.17
SDCBP-203ENST00000424270 RAD9AQ99638 391 aa7.72□□□□□ -1.17
SDCBP-203ENST00000424270 ALDH8A1Q9H2A2 487 aaPredicted RBP7.72□□□□□ -1.17
SDCBP-203ENST00000424270 SH2D4AQ9H788 454 aa7.72□□□□□ -1.17
SDCBP-203ENST00000424270 ARHGEF10LQ9HCE6 1279 aa7.72□□□□□ -1.17
SDCBP-203ENST00000424270 USP34Q70CQ2 3546 aa7.72□□□□□ -1.17
SDCBP-203ENST00000424270 ZNF318Q5VUA4 2279 aa7.71□□□□□ -1.17
SDCBP-203ENST00000424270 LINC01553A4QN01 128 aa7.71□□□□□ -1.18
SDCBP-203ENST00000424270 ADCY6O43306 1168 aa7.71□□□□□ -1.18
SDCBP-203ENST00000424270 GALR2O43603 387 aaPredicted RBP7.71□□□□□ -1.18
SDCBP-203ENST00000424270 CIAO1O76071 339 aa7.71□□□□□ -1.18
SDCBP-203ENST00000424270 POLR3DP05423 398 aaPredicted RBP7.71□□□□□ -1.18
SDCBP-203ENST00000424270 WDR5P61964 334 aaKnown RBP7.71□□□□□ -1.18
SDCBP-203ENST00000424270 EXOSC9Q06265 439 aaKnown RBP7.71□□□□□ -1.18
SDCBP-203ENST00000424270 SIGLEC14Q08ET2 396 aa7.71□□□□□ -1.18
SDCBP-203ENST00000424270 BFSP2Q13515 415 aa7.71□□□□□ -1.18
SDCBP-203ENST00000424270 SMAD2Q15796 467 aaKnown RBP7.71□□□□□ -1.18
SDCBP-203ENST00000424270 SNRNP48Q6IEG0 339 aaKnown RBP7.71□□□□□ -1.18
SDCBP-203ENST00000424270 TATDN1Q6P1N9 297 aa7.71□□□□□ -1.18
SDCBP-203ENST00000424270 METTL16Q86W50 562 aaKnown RBP7.71□□□□□ -1.18
SDCBP-203ENST00000424270 SLC43A3Q8NBI5 491 aa7.71□□□□□ -1.18
SDCBP-203ENST00000424270 RMDN1Q96DB5 314 aa7.71□□□□□ -1.18
SDCBP-203ENST00000424270 XAGE2Q96GT9 111 aa7.71□□□□□ -1.18
SDCBP-203ENST00000424270 C17orf80Q9BSJ5 609 aa7.71□□□□□ -1.18
SDCBP-203ENST00000424270 NSUN3Q9H649 340 aaKnown RBP7.71□□□□□ -1.18
SDCBP-203ENST00000424270 IGFLR1Q9H665 355 aa7.71□□□□□ -1.18
SDCBP-203ENST00000424270 HMG20BQ9P0W2 317 aa7.71□□□□□ -1.18
SDCBP-203ENST00000424270 ZBTB47Q9UFB7 747 aaPredicted RBP7.71□□□□□ -1.18
SDCBP-203ENST00000424270 AKAP2Q9Y2D5 859 aa7.71□□□□□ -1.18
SDCBP-203ENST00000424270 SMCHD1A6NHR9 2005 aa7.71□□□□□ -1.18
SDCBP-203ENST00000424270 TRANK1O15050 2925 aa7.71□□□□□ -1.18
SDCBP-203ENST00000424270 A0A1B0GUL7 405 aa7.7□□□□□ -1.18
SDCBP-203ENST00000424270 MBTPS2O43462 519 aa7.7□□□□□ -1.18
SDCBP-203ENST00000424270 NCK2O43639 380 aa7.7□□□□□ -1.18
SDCBP-203ENST00000424270 VAMP4O75379 141 aa7.7□□□□□ -1.18
SDCBP-203ENST00000424270 MYL3P08590 195 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms