RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 ZBTB48P10074 688 aaPredicted RBP4.02□□□□□ -1.77
TOP2A-201ENST00000423485 PRKAR2BP31323 418 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 GTF2F1P35269 517 aaKnown RBP eCLIP4.02□□□□□ -1.77
TOP2A-201ENST00000423485 HNF1BP35680 557 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 MNX1P50219 401 aaPredicted RBP4.02□□□□□ -1.77
TOP2A-201ENST00000423485 SNX16P57768 344 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 DAB2P98082 770 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 ADALQ6DHV7 355 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 OR6J1Q8NGC5 347 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 HAPLN3Q96S86 360 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 LARP6Q9BRS8 491 aaKnown RBP4.02□□□□□ -1.77
TOP2A-201ENST00000423485 SLC29A3Q9BZD2 475 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 IMPG2Q9BZV3 1241 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 NOL7Q9UMY1 257 aaKnown RBP4.02□□□□□ -1.77
TOP2A-201ENST00000423485 AOX1Q06278 1338 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 GOLGA8CPA6NN73 597 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 H3BQV1 296 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 LAD1O00515 517 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 PRPF6O94906 941 aaKnown RBP4.02□□□□□ -1.77
TOP2A-201ENST00000423485 URODP06132 367 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 ALAS1P13196 640 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 ST8SIA6P61647 398 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 PFKPQ01813 784 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 GRIK4Q16099 956 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 C6orf132Q5T0Z8 1188 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 OTOP3Q7RTS5 596 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 HERVK_113Q902F9 699 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 KIFC2Q96AC6 838 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 RTP3Q9BQQ7 232 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 NUSAP1Q9BXS6 441 aaKnown RBP4.02□□□□□ -1.77
TOP2A-201ENST00000423485 DHX36Q9H2U1 1008 aaKnown RBP4.02□□□□□ -1.77
TOP2A-201ENST00000423485 ATP6V0A4Q9HBG4 840 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 XPNPEP3Q9NQH7 507 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 EHD2Q9NZN4 543 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 ADAMTS8Q9UP79 889 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 FLT4P35916 1363 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 PHACTR2O75167 634 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 SASH1O94885 1247 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 SKIP12755 728 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 RECQLP46063 649 aaPredicted RBP4.02□□□□□ -1.77
TOP2A-201ENST00000423485 TMEM164Q5U3C3 297 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 RSBN1LQ6PCB5 846 aaPredicted RBP4.02□□□□□ -1.77
TOP2A-201ENST00000423485 ZNF467Q7Z7K2 595 aaPredicted RBP4.02□□□□□ -1.77
TOP2A-201ENST00000423485 NLGN2Q8NFZ4 835 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 TMEM87BQ96K49 555 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 PCMTD1Q96MG8 357 aaPredicted RBP4.02□□□□□ -1.77
TOP2A-201ENST00000423485 CRAMP1Q96RY5 1269 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 GBP3Q9H0R5 595 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 RIPOR2Q9Y4F9 1068 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 MRVI1Q9Y6F6 885 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 EMSYQ7Z589 1322 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 CDHR2Q9BYE9 1310 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 BAZ2BQ9UIF8 2168 aaKnown RBP4.02□□□□□ -1.77
TOP2A-201ENST00000423485 ZNF469Q96JG9 3925 aaPredicted RBP4.02□□□□□ -1.77
TOP2A-201ENST00000423485 SBNO2Q9Y2G9 1366 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 PDHXO00330 501 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 TRAPPC3O43617 180 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 PDCP20941 246 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 MCM2P49736 904 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 LMNB2Q03252 620 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 ADAMTS13Q76LX8 1427 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 ANKARQ7Z5J8 1434 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 JAMLQ86YT9 394 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 B3GALNT2Q8NCR0 500 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 GIMAP8Q8ND71 665 aaPredicted RBP4.02□□□□□ -1.77
TOP2A-201ENST00000423485 IFT74Q96LB3 600 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 TOGARAM1Q9Y4F4 1720 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 CDK12Q9NYV4 1490 aaPredicted RBP4.02□□□□□ -1.77
TOP2A-201ENST00000423485 PRR36Q9H6K5 1346 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 CPSF1Q10570 1443 aaKnown RBP4.01□□□□□ -1.77
TOP2A-201ENST00000423485 ENC1O14682 589 aa4.01□□□□□ -1.77
TOP2A-201ENST00000423485 RNASEH1O60930 286 aaKnown RBP4.01□□□□□ -1.77
TOP2A-201ENST00000423485 PFKMP08237 780 aa4.01□□□□□ -1.77
TOP2A-201ENST00000423485 HCLS1P14317 486 aaPredicted RBP4.01□□□□□ -1.77
TOP2A-201ENST00000423485 PLD1Q13393 1074 aa4.01□□□□□ -1.77
TOP2A-201ENST00000423485 FOXR1Q6PIV2 292 aa4.01□□□□□ -1.77
TOP2A-201ENST00000423485 GAS2L3Q86XJ1 694 aa4.01□□□□□ -1.77
TOP2A-201ENST00000423485 CENPSQ8N2Z9 138 aa4.01□□□□□ -1.77
TOP2A-201ENST00000423485 NSMCE1Q8WV22 266 aa4.01□□□□□ -1.77
TOP2A-201ENST00000423485 PKNOX2Q96KN3 472 aa4.01□□□□□ -1.77
TOP2A-201ENST00000423485 STX8Q9UNK0 236 aa4.01□□□□□ -1.77
TOP2A-201ENST00000423485 DDTLA6NHG4 134 aaPredicted RBP4.01□□□□□ -1.77
TOP2A-201ENST00000423485 FANCGO15287 622 aa4.01□□□□□ -1.77
TOP2A-201ENST00000423485 EPB41L2O43491 1005 aaKnown RBP4.01□□□□□ -1.77
TOP2A-201ENST00000423485 MOCS3O95396 460 aa4.01□□□□□ -1.77
TOP2A-201ENST00000423485 EXOSC10Q01780 885 aaKnown RBP4.01□□□□□ -1.77
TOP2A-201ENST00000423485 SLC39A6Q13433 755 aa4.01□□□□□ -1.77
TOP2A-201ENST00000423485 ABCB5Q2M3G0 1257 aa4.01□□□□□ -1.77
TOP2A-201ENST00000423485 CERKLQ49MI3 558 aaPredicted RBP4.01□□□□□ -1.77
TOP2A-201ENST00000423485 IER5Q5VY09 327 aa4.01□□□□□ -1.77
TOP2A-201ENST00000423485 C11orf84Q9BUA3 381 aaPredicted RBP4.01□□□□□ -1.77
TOP2A-201ENST00000423485 C22orf23Q9BZE7 217 aa4.01□□□□□ -1.77
TOP2A-201ENST00000423485 GLT8D2Q9H1C3 349 aa4.01□□□□□ -1.77
TOP2A-201ENST00000423485 SH2B1Q9NRF2 756 aaPredicted RBP4.01□□□□□ -1.77
TOP2A-201ENST00000423485 CHMP5Q9NZZ3 219 aa4.01□□□□□ -1.77
TOP2A-201ENST00000423485 MOSPD1Q9UJG1 213 aa4.01□□□□□ -1.77
TOP2A-201ENST00000423485 KANSL1LA0AUZ9 987 aa4.01□□□□□ -1.77
TOP2A-201ENST00000423485 USP17L10C9JJH3 530 aa4.01□□□□□ -1.77
TOP2A-201ENST00000423485 GOLGA6L22H0YM25 854 aa4.01□□□□□ -1.77
TOP2A-201ENST00000423485 HAX1O00165 279 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms