RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 ARRDC4Q8NCT1 418 aa17.93■□□□□ 0.46
USB1-202ENST00000423271 CHST13Q8NET6 341 aa17.93■□□□□ 0.46
USB1-202ENST00000423271 TMEM47Q9BQJ4 181 aa17.93■□□□□ 0.46
USB1-202ENST00000423271 KBTBD13C9JR72 458 aa17.92■□□□□ 0.46
USB1-202ENST00000423271 PLA2G6O60733 806 aa17.92■□□□□ 0.46
USB1-202ENST00000423271 SNAI1O95863 264 aaPredicted RBP17.92■□□□□ 0.46
USB1-202ENST00000423271 FDX1P10109 184 aa17.92■□□□□ 0.46
USB1-202ENST00000423271 DCAF4Q8WV16 495 aa17.92■□□□□ 0.46
USB1-202ENST00000423271 RNF146Q9NTX7 359 aa17.92■□□□□ 0.46
USB1-202ENST00000423271 TCP11L1Q9NUJ3 509 aa17.92■□□□□ 0.46
USB1-202ENST00000423271 FBXO40Q9UH90 709 aa17.92■□□□□ 0.46
USB1-202ENST00000423271 PRR12Q9ULL5 1215 aa17.92■□□□□ 0.46
USB1-202ENST00000423271 CNPY2Q9Y2B0 182 aa17.92■□□□□ 0.46
USB1-202ENST00000423271 SYNGAP1Q96PV0 1343 aa17.92■□□□□ 0.46
USB1-202ENST00000423271 RARBP10826 455 aa17.91■□□□□ 0.46
USB1-202ENST00000423271 TOP1P11387 765 aaKnown RBP17.91■□□□□ 0.46
USB1-202ENST00000423271 GSPT1P15170 499 aaKnown RBP17.91■□□□□ 0.46
USB1-202ENST00000423271 RTP1P59025 263 aa17.91■□□□□ 0.46
USB1-202ENST00000423271 TTBK2Q6IQ55 1244 aa17.91■□□□□ 0.46
USB1-202ENST00000423271 MAMDC4Q6UXC1 1216 aa17.91■□□□□ 0.46
USB1-202ENST00000423271 MFSD6Q6ZSS7 791 aa17.91■□□□□ 0.46
USB1-202ENST00000423271 MSL3Q8N5Y2 521 aaKnown RBP17.91■□□□□ 0.46
USB1-202ENST00000423271 IL25Q9H293 177 aa17.91■□□□□ 0.46
USB1-202ENST00000423271 ACAD9Q9H845 621 aa17.91■□□□□ 0.46
USB1-202ENST00000423271 XPNPEP3Q9NQH7 507 aa17.91■□□□□ 0.46
USB1-202ENST00000423271 ZHX1Q9UKY1 873 aaPredicted RBP17.91■□□□□ 0.46
USB1-202ENST00000423271 FRMPD2Q68DX3 1309 aaPredicted RBP17.91■□□□□ 0.46
USB1-202ENST00000423271 A0A1W2PPC1 479 aa17.9■□□□□ 0.46
USB1-202ENST00000423271 HIP1O00291 1037 aa17.9■□□□□ 0.46
USB1-202ENST00000423271 PGK1P00558 417 aa17.9■□□□□ 0.46
USB1-202ENST00000423271 ALAS1P13196 640 aa17.9■□□□□ 0.46
USB1-202ENST00000423271 AKR1A1P14550 325 aa17.9■□□□□ 0.46
USB1-202ENST00000423271 SLC16A2P36021 539 aa17.9■□□□□ 0.46
USB1-202ENST00000423271 ADCYAP1R1P41586 468 aa17.9■□□□□ 0.46
USB1-202ENST00000423271 CNTN2Q02246 1040 aa17.9■□□□□ 0.46
USB1-202ENST00000423271 ZNF467Q7Z7K2 595 aaPredicted RBP17.9■□□□□ 0.46
USB1-202ENST00000423271 FERMT2Q96AC1 680 aa17.9■□□□□ 0.46
USB1-202ENST00000423271 A1CFQ9NQ94 594 aaKnown RBP17.9■□□□□ 0.46
USB1-202ENST00000423271 SOX1O00570 391 aaPredicted RBP17.89■□□□□ 0.45
USB1-202ENST00000423271 ZNF213O14771 459 aa17.89■□□□□ 0.45
USB1-202ENST00000423271 PCP11498 1178 aaKnown RBP17.89■□□□□ 0.45
USB1-202ENST00000423271 BMP8BP34820 402 aa17.89■□□□□ 0.45
USB1-202ENST00000423271 MUM1L1Q5H9M0 696 aa17.89■□□□□ 0.45
USB1-202ENST00000423271 TRERF1Q96PN7 1200 aa17.89■□□□□ 0.45
USB1-202ENST00000423271 ZKSCAN3Q9BRR0 538 aa17.89■□□□□ 0.45
USB1-202ENST00000423271 RNF41Q9H4P4 317 aaPredicted RBP17.89■□□□□ 0.45
USB1-202ENST00000423271 GPCPD1Q9NPB8 672 aa17.89■□□□□ 0.45
USB1-202ENST00000423271 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.89■□□□□ 0.45
USB1-202ENST00000423271 ATP11BQ9Y2G3 1177 aa17.89■□□□□ 0.45
USB1-202ENST00000423271 LCTP09848 1927 aa17.88■□□□□ 0.45
USB1-202ENST00000423271 ADCY6O43306 1168 aa17.88■□□□□ 0.45
USB1-202ENST00000423271 ADAMTS4O75173 837 aa17.88■□□□□ 0.45
USB1-202ENST00000423271 PDHBP11177 359 aa17.88■□□□□ 0.45
USB1-202ENST00000423271 MDM2Q00987 491 aaPredicted RBP17.88■□□□□ 0.45
USB1-202ENST00000423271 TKFCQ3LXA3 575 aa17.88■□□□□ 0.45
USB1-202ENST00000423271 TTC22Q5TAA0 569 aa17.88■□□□□ 0.45
USB1-202ENST00000423271 SYDE2Q5VT97 1194 aa17.88■□□□□ 0.45
USB1-202ENST00000423271 SLC39A5Q6ZMH5 540 aa17.88■□□□□ 0.45
USB1-202ENST00000423271 ARMCX2Q7L311 632 aa17.88■□□□□ 0.45
USB1-202ENST00000423271 FAM133AQ8N9E0 248 aa17.88■□□□□ 0.45
USB1-202ENST00000423271 DSCC1Q9BVC3 393 aa17.88■□□□□ 0.45
USB1-202ENST00000423271 RANBP17Q9H2T7 1088 aaKnown RBP17.88■□□□□ 0.45
USB1-202ENST00000423271 CCPG1Q9ULG6 757 aa17.88■□□□□ 0.45
USB1-202ENST00000423271 LRRC37A2A6NM11 1700 aa17.87■□□□□ 0.45
USB1-202ENST00000423271 LTBP2Q14767 1821 aa17.87■□□□□ 0.45
USB1-202ENST00000423271 SOWAHBA6NEL2 793 aa17.87■□□□□ 0.45
USB1-202ENST00000423271 POTEB2H3BUK9 544 aa17.87■□□□□ 0.45
USB1-202ENST00000423271 ACVR2BQ13705 512 aa17.87■□□□□ 0.45
USB1-202ENST00000423271 SNX17Q15036 470 aa17.87■□□□□ 0.45
USB1-202ENST00000423271 TRIM60Q495X7 471 aa17.87■□□□□ 0.45
USB1-202ENST00000423271 BTNL9Q6UXG8 535 aa17.87■□□□□ 0.45
USB1-202ENST00000423271 CENPQQ7L2Z9 268 aaPredicted RBP17.87■□□□□ 0.45
USB1-202ENST00000423271 CCDC144CPQ8IYA2 1237 aa17.87■□□□□ 0.45
USB1-202ENST00000423271 ESR2Q92731 530 aa17.87■□□□□ 0.45
USB1-202ENST00000423271 CCDC136Q96JN2 1154 aa17.87■□□□□ 0.45
USB1-202ENST00000423271 KATNBL1Q9H079 304 aa17.87■□□□□ 0.45
USB1-202ENST00000423271 FAM184BQ9ULE4 1060 aa17.87■□□□□ 0.45
USB1-202ENST00000423271 PHF24Q9UPV7 400 aa17.87■□□□□ 0.45
USB1-202ENST00000423271 DDX49Q9Y6V7 483 aaKnown RBP17.87■□□□□ 0.45
USB1-202ENST00000423271 ASTN1O14525 1302 aa17.87■□□□□ 0.45
USB1-202ENST00000423271 SYNRGQ9UMZ2 1314 aa17.87■□□□□ 0.45
USB1-202ENST00000423271 MYADML2A6NDP7 307 aa17.86■□□□□ 0.45
USB1-202ENST00000423271 KDM4AO75164 1064 aa17.86■□□□□ 0.45
USB1-202ENST00000423271 ICAM1P05362 532 aa17.86■□□□□ 0.45
USB1-202ENST00000423271 IRX5P78411 483 aaPredicted RBP17.86■□□□□ 0.45
USB1-202ENST00000423271 RNF180Q86T96 592 aa17.86■□□□□ 0.45
USB1-202ENST00000423271 PIAS4Q8N2W9 510 aaPredicted RBP17.86■□□□□ 0.45
USB1-202ENST00000423271 LRCH3Q96II8 777 aa17.86■□□□□ 0.45
USB1-202ENST00000423271 TTC14Q96N46 770 aa17.86■□□□□ 0.45
USB1-202ENST00000423271 UBE2OQ9C0C9 1292 aaKnown RBP17.86■□□□□ 0.45
USB1-202ENST00000423271 B4E1Z4 1266 aa17.85■□□□□ 0.45
USB1-202ENST00000423271 SNHG28P0DPA3 235 aa17.85■□□□□ 0.45
USB1-202ENST00000423271 ZNF543Q08ER8 600 aa17.85■□□□□ 0.45
USB1-202ENST00000423271 CCDC144BQ3MJ40 725 aa17.85■□□□□ 0.45
USB1-202ENST00000423271 PURBQ96QR8 312 aaKnown RBP17.85■□□□□ 0.45
USB1-202ENST00000423271 ABHD16BQ9H3Z7 469 aa17.85■□□□□ 0.45
USB1-202ENST00000423271 CYP39A1Q9NYL5 469 aa17.85■□□□□ 0.45
USB1-202ENST00000423271 A0A1W2PQ45 241 aaPredicted RBP17.84■□□□□ 0.45
USB1-202ENST00000423271 A0A1W2PQY0 241 aa17.84■□□□□ 0.45
USB1-202ENST00000423271 IMMTQ16891 758 aaKnown RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms