RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 RAB11FIP4Q86YS3 637 aa18.36■□□□□ 0.53
BRAT1-202ENST00000421712 SH3TC2Q8TF17 1288 aa18.36■□□□□ 0.53
BRAT1-202ENST00000421712 MAD2L2Q9UI95 211 aa18.36■□□□□ 0.53
BRAT1-202ENST00000421712 CCPG1Q9ULG6 757 aa18.36■□□□□ 0.53
BRAT1-202ENST00000421712 RIPK3Q9Y572 518 aa18.36■□□□□ 0.53
BRAT1-202ENST00000421712 A0A0G2JMZ2 1700 aa18.35■□□□□ 0.53
BRAT1-202ENST00000421712 PALM3A6NDB9 673 aaPredicted RBP18.35■□□□□ 0.53
BRAT1-202ENST00000421712 CCDC85CA6NKD9 419 aa18.35■□□□□ 0.53
BRAT1-202ENST00000421712 DDAH1O94760 285 aa18.35■□□□□ 0.53
BRAT1-202ENST00000421712 MYCP01106 439 aaPredicted RBP18.35■□□□□ 0.53
BRAT1-202ENST00000421712 CALM1P0DP23 149 aa18.35■□□□□ 0.53
BRAT1-202ENST00000421712 CALM2P0DP24 149 aa18.35■□□□□ 0.53
BRAT1-202ENST00000421712 CALM3P0DP25 149 aa18.35■□□□□ 0.53
BRAT1-202ENST00000421712 RPS6KB1P23443 525 aa18.35■□□□□ 0.53
BRAT1-202ENST00000421712 GRK4P32298 578 aa18.35■□□□□ 0.53
BRAT1-202ENST00000421712 KIF5BP33176 963 aa18.35■□□□□ 0.53
BRAT1-202ENST00000421712 TROAPQ12815 778 aa18.35■□□□□ 0.53
BRAT1-202ENST00000421712 MAP2K5Q13163 448 aa18.35■□□□□ 0.53
BRAT1-202ENST00000421712 IRF5Q13568 498 aa18.35■□□□□ 0.53
BRAT1-202ENST00000421712 KCTD2Q14681 263 aa18.35■□□□□ 0.53
BRAT1-202ENST00000421712 MORN1Q5T089 497 aa18.35■□□□□ 0.53
BRAT1-202ENST00000421712 Q6ZUG5 572 aa18.35■□□□□ 0.53
BRAT1-202ENST00000421712 CCDC144CPQ8IYA2 1237 aa18.35■□□□□ 0.53
BRAT1-202ENST00000421712 ADGRF4Q8IZF3 695 aa18.35■□□□□ 0.53
BRAT1-202ENST00000421712 RANBP17Q9H2T7 1088 aaKnown RBP18.35■□□□□ 0.53
BRAT1-202ENST00000421712 CYP46A1Q9Y6A2 500 aa18.35■□□□□ 0.53
BRAT1-202ENST00000421712 CAPN15O75808 1086 aa18.34■□□□□ 0.53
BRAT1-202ENST00000421712 ICAM1P05362 532 aa18.34■□□□□ 0.53
BRAT1-202ENST00000421712 ELNP15502 786 aa18.34■□□□□ 0.53
BRAT1-202ENST00000421712 RXRAP19793 462 aa18.34■□□□□ 0.53
BRAT1-202ENST00000421712 ADORA2AP29274 412 aa18.34■□□□□ 0.53
BRAT1-202ENST00000421712 GRB14Q14449 540 aa18.34■□□□□ 0.53
BRAT1-202ENST00000421712 RUFY3Q7L099 469 aa18.34■□□□□ 0.53
BRAT1-202ENST00000421712 SLAIN1Q8ND83 568 aa18.34■□□□□ 0.53
BRAT1-202ENST00000421712 CHST13Q8NET6 341 aa18.34■□□□□ 0.53
BRAT1-202ENST00000421712 DDX11Q96FC9 970 aa18.34■□□□□ 0.53
BRAT1-202ENST00000421712 TRERF1Q96PN7 1200 aa18.34■□□□□ 0.53
BRAT1-202ENST00000421712 SLC5A4Q9NY91 659 aa18.34■□□□□ 0.53
BRAT1-202ENST00000421712 FBXO40Q9UH90 709 aa18.34■□□□□ 0.53
BRAT1-202ENST00000421712 ZNF536O15090 1300 aa18.33■□□□□ 0.53
BRAT1-202ENST00000421712 CDC37Q16543 378 aaPredicted RBP18.33■□□□□ 0.52
BRAT1-202ENST00000421712 TKFCQ3LXA3 575 aa18.33■□□□□ 0.52
BRAT1-202ENST00000421712 SGMS1Q86VZ5 419 aa18.33■□□□□ 0.52
BRAT1-202ENST00000421712 MICU3Q86XE3 530 aa18.33■□□□□ 0.52
BRAT1-202ENST00000421712 ANKRD35Q8N283 1001 aa18.33■□□□□ 0.52
BRAT1-202ENST00000421712 MAP3K14Q99558 947 aa18.33■□□□□ 0.52
BRAT1-202ENST00000421712 UPF3BQ9BZI7 483 aaKnown RBP18.33■□□□□ 0.52
BRAT1-202ENST00000421712 ZSWIM6Q9HCJ5 1215 aa18.33■□□□□ 0.52
BRAT1-202ENST00000421712 RNF146Q9NTX7 359 aa18.33■□□□□ 0.52
BRAT1-202ENST00000421712 PNMA2Q9UL42 364 aa18.33■□□□□ 0.52
BRAT1-202ENST00000421712 KLF18A0A0U1RQI7 1052 aa18.32■□□□□ 0.52
BRAT1-202ENST00000421712 ZBTB43O43298 467 aa18.32■□□□□ 0.52
BRAT1-202ENST00000421712 XRCC5P13010 732 aaKnown RBP18.32■□□□□ 0.52
BRAT1-202ENST00000421712 GNAQP50148 359 aa18.32■□□□□ 0.52
BRAT1-202ENST00000421712 UBXN2AP68543 259 aa18.32■□□□□ 0.52
BRAT1-202ENST00000421712 USH1GQ495M9 461 aa18.32■□□□□ 0.52
BRAT1-202ENST00000421712 ABRAQ8N0Z2 381 aa18.32■□□□□ 0.52
BRAT1-202ENST00000421712 PXYLP1Q8TE99 480 aa18.32■□□□□ 0.52
BRAT1-202ENST00000421712 PIBF1Q8WXW3 757 aa18.32■□□□□ 0.52
BRAT1-202ENST00000421712 BRF1Q92994 677 aa18.32■□□□□ 0.52
BRAT1-202ENST00000421712 APBA2Q99767 749 aa18.32■□□□□ 0.52
BRAT1-202ENST00000421712 TM6SF1Q9BZW5 370 aa18.32■□□□□ 0.52
BRAT1-202ENST00000421712 ACAD9Q9H845 621 aa18.32■□□□□ 0.52
BRAT1-202ENST00000421712 JMJD4Q9H9V9 463 aa18.32■□□□□ 0.52
BRAT1-202ENST00000421712 PGK2P07205 417 aa18.31■□□□□ 0.52
BRAT1-202ENST00000421712 TAL1P17542 331 aaPredicted RBP18.31■□□□□ 0.52
BRAT1-202ENST00000421712 ANAPC15P60006 121 aa18.31■□□□□ 0.52
BRAT1-202ENST00000421712 APOBRQ0VD83 1088 aa18.31■□□□□ 0.52
BRAT1-202ENST00000421712 APOA5Q6Q788 366 aa18.31■□□□□ 0.52
BRAT1-202ENST00000421712 HOMER1Q86YM7 354 aa18.31■□□□□ 0.52
BRAT1-202ENST00000421712 FANCBQ8NB91 859 aa18.31■□□□□ 0.52
BRAT1-202ENST00000421712 USP6NLQ92738 828 aa18.31■□□□□ 0.52
BRAT1-202ENST00000421712 LZTS2Q9BRK4 669 aa18.31■□□□□ 0.52
BRAT1-202ENST00000421712 PDRG1Q9NUG6 133 aa18.31■□□□□ 0.52
BRAT1-202ENST00000421712 BRPF3Q9ULD4 1205 aa18.31■□□□□ 0.52
BRAT1-202ENST00000421712 PLXNB2O15031 1838 aa18.3■□□□□ 0.52
BRAT1-202ENST00000421712 COBLO75128 1261 aa18.3■□□□□ 0.52
BRAT1-202ENST00000421712 QRICH1Q2TAL8 776 aa18.3■□□□□ 0.52
BRAT1-202ENST00000421712 FBXO11Q86XK2 927 aa18.3■□□□□ 0.52
BRAT1-202ENST00000421712 TRMT44Q8IYL2 757 aaKnown RBP18.3■□□□□ 0.52
BRAT1-202ENST00000421712 CCDC82Q8N4S0 544 aa18.3■□□□□ 0.52
BRAT1-202ENST00000421712 NPLOC4Q8TAT6 608 aa18.3■□□□□ 0.52
BRAT1-202ENST00000421712 ARMC5Q96C12 935 aa18.3■□□□□ 0.52
BRAT1-202ENST00000421712 UPF2Q9HAU5 1272 aaKnown RBP18.3■□□□□ 0.52
BRAT1-202ENST00000421712 ZNFX1Q9P2E3 1918 aaKnown RBP18.29■□□□□ 0.52
BRAT1-202ENST00000421712 GOLGA8AA7E2F4 631 aa18.29■□□□□ 0.52
BRAT1-202ENST00000421712 GOLGA8BA8MQT2 603 aa18.29■□□□□ 0.52
BRAT1-202ENST00000421712 HMGCRP04035 888 aa18.29■□□□□ 0.52
BRAT1-202ENST00000421712 INHAP05111 366 aa18.29■□□□□ 0.52
BRAT1-202ENST00000421712 CCL14Q16627 93 aa18.29■□□□□ 0.52
BRAT1-202ENST00000421712 RTN1Q16799 776 aa18.29■□□□□ 0.52
BRAT1-202ENST00000421712 MUM1L1Q5H9M0 696 aa18.29■□□□□ 0.52
BRAT1-202ENST00000421712 NSMFQ6X4W1 530 aa18.29■□□□□ 0.52
BRAT1-202ENST00000421712 TRIB2Q92519 343 aa18.29■□□□□ 0.52
BRAT1-202ENST00000421712 RBM28Q9NW13 759 aaKnown RBP18.29■□□□□ 0.52
BRAT1-202ENST00000421712 BAZ2BQ9UIF8 2168 aaKnown RBP18.29■□□□□ 0.52
BRAT1-202ENST00000421712 ZBTB5O15062 677 aa18.28■□□□□ 0.52
BRAT1-202ENST00000421712 PLEKHA8P1O95397 391 aa18.28■□□□□ 0.52
BRAT1-202ENST00000421712 HOXC6P09630 235 aa18.28■□□□□ 0.52
BRAT1-202ENST00000421712 MFSD14CQ5VZR4 134 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms