RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 HEATR3Q7Z4Q2 680 aa24.81■■□□□ 1.56
ABCF3-202ENST00000421340 MS4A4AQ96JQ5 239 aa24.81■■□□□ 1.56
ABCF3-202ENST00000421340 ATP6V1DQ9Y5K8 247 aa24.81■■□□□ 1.56
ABCF3-202ENST00000421340 OTUD7BQ6GQQ9 843 aa24.8■■□□□ 1.56
ABCF3-202ENST00000421340 GADL1Q6ZQY3 521 aa24.8■■□□□ 1.56
ABCF3-202ENST00000421340 FBXO11Q86XK2 927 aa24.8■■□□□ 1.56
ABCF3-202ENST00000421340 SHISA4Q96DD7 197 aa24.8■■□□□ 1.56
ABCF3-202ENST00000421340 ZMYND12Q9H0C1 365 aa24.8■■□□□ 1.56
ABCF3-202ENST00000421340 SLC38A10Q9HBR0 1119 aa24.8■■□□□ 1.56
ABCF3-202ENST00000421340 GJB4Q9NTQ9 266 aa24.8■■□□□ 1.56
ABCF3-202ENST00000421340 SLC45A1Q9Y2W3 748 aa24.8■■□□□ 1.56
ABCF3-202ENST00000421340 PPP1R11O60927 126 aaPredicted RBP24.79■■□□□ 1.56
ABCF3-202ENST00000421340 ZBED4O75132 1171 aa24.79■■□□□ 1.56
ABCF3-202ENST00000421340 U2AF2P26368 475 aaKnown RBP eCLIP24.79■■□□□ 1.56
ABCF3-202ENST00000421340 NLRP5P59047 1200 aa24.79■■□□□ 1.56
ABCF3-202ENST00000421340 GUCY1B3Q02153 619 aa24.79■■□□□ 1.56
ABCF3-202ENST00000421340 TREML2Q5T2D2 321 aa24.79■■□□□ 1.56
ABCF3-202ENST00000421340 DAGLBQ8NCG7 672 aa24.79■■□□□ 1.56
ABCF3-202ENST00000421340 GPKOWQ92917 476 aaPredicted RBP eCLIP24.79■■□□□ 1.56
ABCF3-202ENST00000421340 GLT8D2Q9H1C3 349 aa24.79■■□□□ 1.56
ABCF3-202ENST00000421340 FOXP1Q9H334 677 aaPredicted RBP24.79■■□□□ 1.56
ABCF3-202ENST00000421340 VWA5AO00534 786 aa24.78■■□□□ 1.56
ABCF3-202ENST00000421340 GNA11P29992 359 aa24.78■■□□□ 1.56
ABCF3-202ENST00000421340 ZNF157P51786 506 aaPredicted RBP24.78■■□□□ 1.56
ABCF3-202ENST00000421340 FOSBP53539 338 aa24.78■■□□□ 1.56
ABCF3-202ENST00000421340 OAZ1P54368 228 aa24.78■■□□□ 1.56
ABCF3-202ENST00000421340 NAPAP54920 295 aa24.78■■□□□ 1.56
ABCF3-202ENST00000421340 KIF23Q02241 960 aaPredicted RBP24.78■■□□□ 1.56
ABCF3-202ENST00000421340 GPAT2Q6NUI2 795 aa24.78■■□□□ 1.56
ABCF3-202ENST00000421340 LBX2Q6XYB7 198 aa24.78■■□□□ 1.56
ABCF3-202ENST00000421340 RASAL3Q86YV0 1011 aa24.78■■□□□ 1.56
ABCF3-202ENST00000421340 CCDC102AQ96A19 550 aa24.78■■□□□ 1.56
ABCF3-202ENST00000421340 BRMS1Q9HCU9 246 aa24.78■■□□□ 1.56
ABCF3-202ENST00000421340 C6orf50Q9HD87 102 aa24.78■■□□□ 1.56
ABCF3-202ENST00000421340 KCNJ14Q9UNX9 436 aa24.78■■□□□ 1.56
ABCF3-202ENST00000421340 PCDHA1Q9Y5I3 950 aa24.78■■□□□ 1.56
ABCF3-202ENST00000421340 TESPA1A2RU30 521 aaPredicted RBP24.77■■□□□ 1.56
ABCF3-202ENST00000421340 ATP2A1O14983 1001 aa24.77■■□□□ 1.56
ABCF3-202ENST00000421340 ICAM1P05362 532 aa24.77■■□□□ 1.56
ABCF3-202ENST00000421340 RESTQ13127 1097 aa24.77■■□□□ 1.56
ABCF3-202ENST00000421340 TYW1BQ6NUM6 668 aa24.77■■□□□ 1.56
ABCF3-202ENST00000421340 CLEC17AQ6ZS10 378 aa24.77■■□□□ 1.56
ABCF3-202ENST00000421340 BRAPQ7Z569 592 aa24.77■■□□□ 1.56
ABCF3-202ENST00000421340 PCDHA4Q9UN74 947 aa24.77■■□□□ 1.56
ABCF3-202ENST00000421340 LOC285556D6RIA3 1793 aa24.76■■□□□ 1.55
ABCF3-202ENST00000421340 SMCO2A6NFE2 343 aa24.76■■□□□ 1.55
ABCF3-202ENST00000421340 OSBPP22059 807 aa24.76■■□□□ 1.55
ABCF3-202ENST00000421340 KRT2P35908 639 aa24.76■■□□□ 1.55
ABCF3-202ENST00000421340 NPY5RQ15761 445 aa24.76■■□□□ 1.55
ABCF3-202ENST00000421340 MCTP1Q6DN14 999 aa24.76■■□□□ 1.55
ABCF3-202ENST00000421340 ANKRD23Q86SG2 305 aa24.76■■□□□ 1.55
ABCF3-202ENST00000421340 DIS3L2Q8IYB7 885 aaKnown RBP24.76■■□□□ 1.55
ABCF3-202ENST00000421340 MB21D1Q8N884 522 aa24.76■■□□□ 1.55
ABCF3-202ENST00000421340 BICD2Q8TD16 824 aa24.76■■□□□ 1.55
ABCF3-202ENST00000421340 TNPO1Q92973 898 aaKnown RBP24.76■■□□□ 1.55
ABCF3-202ENST00000421340 COA7Q96BR5 231 aa24.76■■□□□ 1.55
ABCF3-202ENST00000421340 CTDP1Q9Y5B0 961 aaPredicted RBP24.76■■□□□ 1.55
ABCF3-202ENST00000421340 SLC10A3P09131 477 aa24.75■■□□□ 1.55
ABCF3-202ENST00000421340 BLIDQ8IZY5 108 aa24.75■■□□□ 1.55
ABCF3-202ENST00000421340 ATG4CQ96DT6 458 aa24.75■■□□□ 1.55
ABCF3-202ENST00000421340 RIC8AQ9NPQ8 531 aa24.75■■□□□ 1.55
ABCF3-202ENST00000421340 CCL15-CCL14A0A0B4J2E2 113 aa24.74■■□□□ 1.55
ABCF3-202ENST00000421340 MANSC4A6NHS7 340 aaPredicted RBP24.74■■□□□ 1.55
ABCF3-202ENST00000421340 SPDYE16A6NNV3 312 aaPredicted RBP24.74■■□□□ 1.55
ABCF3-202ENST00000421340 MRPL12P52815 198 aaKnown RBP24.74■■□□□ 1.55
ABCF3-202ENST00000421340 INHBEP58166 350 aa24.74■■□□□ 1.55
ABCF3-202ENST00000421340 SNAP25P60880 206 aa24.74■■□□□ 1.55
ABCF3-202ENST00000421340 IRX3P78415 501 aaPredicted RBP24.74■■□□□ 1.55
ABCF3-202ENST00000421340 CCL15Q16663 113 aa24.74■■□□□ 1.55
ABCF3-202ENST00000421340 REPS2Q8NFH8 660 aa24.74■■□□□ 1.55
ABCF3-202ENST00000421340 MAF1Q9H063 256 aa24.74■■□□□ 1.55
ABCF3-202ENST00000421340 ASCC2Q9H1I8 757 aaPredicted RBP24.74■■□□□ 1.55
ABCF3-202ENST00000421340 PNMA3Q9UL41 463 aa24.74■■□□□ 1.55
ABCF3-202ENST00000421340 ABT1Q9ULW3 272 aaKnown RBP24.74■■□□□ 1.55
ABCF3-202ENST00000421340 MRPL11Q9Y3B7 192 aaKnown RBP24.74■■□□□ 1.55
ABCF3-202ENST00000421340 ZNF536O15090 1300 aa24.74■■□□□ 1.55
ABCF3-202ENST00000421340 ABCB11O95342 1321 aa24.74■■□□□ 1.55
ABCF3-202ENST00000421340 BTBD18B2RXH4 712 aa24.73■■□□□ 1.55
ABCF3-202ENST00000421340 GNL2Q13823 731 aaKnown RBP24.73■■□□□ 1.55
ABCF3-202ENST00000421340 FOXD4L5Q5VV16 416 aaPredicted RBP24.73■■□□□ 1.55
ABCF3-202ENST00000421340 ATL3Q6DD88 541 aa24.73■■□□□ 1.55
ABCF3-202ENST00000421340 MCTP2Q6DN12 878 aa24.73■■□□□ 1.55
ABCF3-202ENST00000421340 CCDC174Q6PII3 467 aa24.73■■□□□ 1.55
ABCF3-202ENST00000421340 FERMT3Q86UX7 667 aa24.73■■□□□ 1.55
ABCF3-202ENST00000421340 GTF3C2Q8WUA4 911 aaPredicted RBP24.73■■□□□ 1.55
ABCF3-202ENST00000421340 FOXD4L4Q8WXT5 416 aaPredicted RBP24.73■■□□□ 1.55
ABCF3-202ENST00000421340 BRI3BPQ8WY22 251 aa24.73■■□□□ 1.55
ABCF3-202ENST00000421340 P2RX7Q99572 595 aaKnown RBP24.73■■□□□ 1.55
ABCF3-202ENST00000421340 PTPRFP10586 1907 aa24.73■■□□□ 1.55
ABCF3-202ENST00000421340 M0R2N6 131 aa24.72■■□□□ 1.55
ABCF3-202ENST00000421340 ADCY7P51828 1080 aa24.72■■□□□ 1.55
ABCF3-202ENST00000421340 NOSTRINQ8IVI9 506 aa24.72■■□□□ 1.55
ABCF3-202ENST00000421340 SAMD3Q8N6K7 520 aa24.72■■□□□ 1.55
ABCF3-202ENST00000421340 TNFRSF25Q93038 417 aa24.72■■□□□ 1.55
ABCF3-202ENST00000421340 PSTPIP2Q9H939 334 aa24.72■■□□□ 1.55
ABCF3-202ENST00000421340 ZCCHC17Q9NP64 241 aaKnown RBP24.72■■□□□ 1.55
ABCF3-202ENST00000421340 CREBZFQ9NS37 354 aa24.72■■□□□ 1.55
ABCF3-202ENST00000421340 FAM155AB1AL88 458 aaPredicted RBP24.71■■□□□ 1.55
ABCF3-202ENST00000421340 KIF28PB7ZC32 967 aa24.71■■□□□ 1.55
ABCF3-202ENST00000421340 TKFCQ3LXA3 575 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms