RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 SH3RF1Q7Z6J0 888 aa22.39■■□□□ 1.17
VARS2-202ENST00000421263 DEFB123Q8N688 67 aa22.39■■□□□ 1.17
VARS2-202ENST00000421263 LENG1Q96BZ8 264 aaPredicted RBP22.39■■□□□ 1.17
VARS2-202ENST00000421263 ABHD16BQ9H3Z7 469 aa22.39■■□□□ 1.17
VARS2-202ENST00000421263 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.39■■□□□ 1.17
VARS2-202ENST00000421263 SYNRGQ9UMZ2 1314 aa22.38■■□□□ 1.17
VARS2-202ENST00000421263 A0A1W2PQ45 241 aaPredicted RBP22.38■■□□□ 1.17
VARS2-202ENST00000421263 A0A1W2PQY0 241 aa22.38■■□□□ 1.17
VARS2-202ENST00000421263 TRIM43BA6NCK2 446 aa22.38■■□□□ 1.17
VARS2-202ENST00000421263 RANBP6O60518 1105 aaKnown RBP22.38■■□□□ 1.17
VARS2-202ENST00000421263 TKFCQ3LXA3 575 aa22.38■■□□□ 1.17
VARS2-202ENST00000421263 FAM133AQ8N9E0 248 aa22.38■■□□□ 1.17
VARS2-202ENST00000421263 TRIM43Q96BQ3 446 aaPredicted RBP22.38■■□□□ 1.17
VARS2-202ENST00000421263 AGBL1Q96MI9 1066 aa22.38■■□□□ 1.17
VARS2-202ENST00000421263 KATNBL1Q9H079 304 aa22.38■■□□□ 1.17
VARS2-202ENST00000421263 ACAD9Q9H845 621 aa22.38■■□□□ 1.17
VARS2-202ENST00000421263 LAMA2P24043 3122 aaKnown RBP22.37■■□□□ 1.17
VARS2-202ENST00000421263 POTEB2H3BUK9 544 aa22.37■■□□□ 1.17
VARS2-202ENST00000421263 HSPD1P10809 573 aaKnown RBP22.37■■□□□ 1.17
VARS2-202ENST00000421263 ACLYP53396 1101 aa22.37■■□□□ 1.17
VARS2-202ENST00000421263 KCTD1Q719H9 257 aa22.37■■□□□ 1.17
VARS2-202ENST00000421263 Q7L0L9 218 aa22.37■■□□□ 1.17
VARS2-202ENST00000421263 BADQ92934 168 aa22.37■■□□□ 1.17
VARS2-202ENST00000421263 LNPKQ9C0E8 428 aa22.37■■□□□ 1.17
VARS2-202ENST00000421263 A1CFQ9NQ94 594 aaKnown RBP22.37■■□□□ 1.17
VARS2-202ENST00000421263 TCP11L1Q9NUJ3 509 aa22.37■■□□□ 1.17
VARS2-202ENST00000421263 MTMR10Q9NXD2 777 aa22.37■■□□□ 1.17
VARS2-202ENST00000421263 ZHX1Q9UKY1 873 aaPredicted RBP22.37■■□□□ 1.17
VARS2-202ENST00000421263 ZMYM6O95789 1325 aa22.36■■□□□ 1.17
VARS2-202ENST00000421263 MOXD2PA6NHM9 499 aa22.36■■□□□ 1.17
VARS2-202ENST00000421263 ADCY6O43306 1168 aa22.36■■□□□ 1.17
VARS2-202ENST00000421263 CST5P28325 142 aaPredicted RBP22.36■■□□□ 1.17
VARS2-202ENST00000421263 CNTN2Q02246 1040 aa22.36■■□□□ 1.17
VARS2-202ENST00000421263 CCDC144BQ3MJ40 725 aa22.36■■□□□ 1.17
VARS2-202ENST00000421263 FAM109BQ6ICB4 259 aaPredicted RBP22.36■■□□□ 1.17
VARS2-202ENST00000421263 ARMCX2Q7L311 632 aa22.36■■□□□ 1.17
VARS2-202ENST00000421263 ZNF589Q86UQ0 364 aaPredicted RBP22.36■■□□□ 1.17
VARS2-202ENST00000421263 RWDD1Q9H446 243 aaPredicted RBP22.36■■□□□ 1.17
VARS2-202ENST00000421263 OSBPL3Q9H4L5 887 aa22.36■■□□□ 1.17
VARS2-202ENST00000421263 PRDM5Q9NQX1 630 aaPredicted RBP22.36■■□□□ 1.17
VARS2-202ENST00000421263 HOMER2Q9NSB8 354 aa22.36■■□□□ 1.17
VARS2-202ENST00000421263 RNF146Q9NTX7 359 aa22.36■■□□□ 1.17
VARS2-202ENST00000421263 PRR12Q9ULL5 1215 aa22.36■■□□□ 1.17
VARS2-202ENST00000421263 SOWAHBA6NEL2 793 aa22.35■■□□□ 1.17
VARS2-202ENST00000421263 ITGB8P26012 769 aa22.35■■□□□ 1.17
VARS2-202ENST00000421263 IKQ13123 557 aaPredicted RBP22.35■■□□□ 1.17
VARS2-202ENST00000421263 NMIQ13287 307 aaPredicted RBP22.35■■□□□ 1.17
VARS2-202ENST00000421263 SHHQ15465 462 aa22.35■■□□□ 1.17
VARS2-202ENST00000421263 KCNA10Q16322 511 aa22.35■■□□□ 1.17
VARS2-202ENST00000421263 BTNL9Q6UXG8 535 aa22.35■■□□□ 1.17
VARS2-202ENST00000421263 ANKRD33Q7Z3H0 272 aa22.35■■□□□ 1.17
VARS2-202ENST00000421263 CCDC144CPQ8IYA2 1237 aa22.35■■□□□ 1.17
VARS2-202ENST00000421263 CHMP4CQ96CF2 233 aa22.35■■□□□ 1.17
VARS2-202ENST00000421263 TOX2Q96NM4 488 aa22.35■■□□□ 1.17
VARS2-202ENST00000421263 TRERF1Q96PN7 1200 aa22.35■■□□□ 1.17
VARS2-202ENST00000421263 UPF3AQ9H1J1 476 aaKnown RBP22.35■■□□□ 1.17
VARS2-202ENST00000421263 MCM3APO60318 1980 aa22.35■■□□□ 1.17
VARS2-202ENST00000421263 KIAA0355O15063 1070 aa22.34■■□□□ 1.17
VARS2-202ENST00000421263 CLTBP09497 229 aa22.34■■□□□ 1.17
VARS2-202ENST00000421263 GJA9P57773 515 aa22.34■■□□□ 1.17
VARS2-202ENST00000421263 NKX3-2P78367 333 aa22.34■■□□□ 1.17
VARS2-202ENST00000421263 RASGRP2Q7LDG7 609 aa22.34■■□□□ 1.17
VARS2-202ENST00000421263 NUP133Q8WUM0 1156 aa22.34■■□□□ 1.17
VARS2-202ENST00000421263 DCAF4Q8WV16 495 aa22.34■■□□□ 1.17
VARS2-202ENST00000421263 ISY1Q9ULR0 285 aaKnown RBP22.34■■□□□ 1.17
VARS2-202ENST00000421263 MYADML2A6NDP7 307 aa22.33■■□□□ 1.17
VARS2-202ENST00000421263 TRIM6-TRIM34B2RNG4 842 aa22.33■■□□□ 1.17
VARS2-202ENST00000421263 IGHDP01880 384 aa22.33■■□□□ 1.17
VARS2-202ENST00000421263 ALAS1P13196 640 aa22.33■■□□□ 1.17
VARS2-202ENST00000421263 C9orf50Q5SZB4 431 aa22.33■■□□□ 1.17
VARS2-202ENST00000421263 CHD1LQ86WJ1 897 aa22.33■■□□□ 1.17
VARS2-202ENST00000421263 PLEKHM2Q8IWE5 1019 aa22.33■■□□□ 1.17
VARS2-202ENST00000421263 TMEM47Q9BQJ4 181 aa22.33■■□□□ 1.17
VARS2-202ENST00000421263 STARD7Q9NQZ5 370 aa22.33■■□□□ 1.17
VARS2-202ENST00000421263 STXBP5LQ9Y2K9 1186 aa22.33■■□□□ 1.17
VARS2-202ENST00000421263 CCDC171Q6TFL3 1326 aa22.32■■□□□ 1.16
VARS2-202ENST00000421263 CTAGE5O15320 804 aa22.32■■□□□ 1.16
VARS2-202ENST00000421263 TOP1P11387 765 aaKnown RBP22.32■■□□□ 1.16
VARS2-202ENST00000421263 PCP11498 1178 aaKnown RBP22.32■■□□□ 1.16
VARS2-202ENST00000421263 SDSP20132 328 aa22.32■■□□□ 1.16
VARS2-202ENST00000421263 CDK7P50613 346 aa22.32■■□□□ 1.16
VARS2-202ENST00000421263 SNAP25P60880 206 aa22.32■■□□□ 1.16
VARS2-202ENST00000421263 IRX5P78411 483 aaPredicted RBP22.32■■□□□ 1.16
VARS2-202ENST00000421263 NUCB1Q02818 461 aa22.32■■□□□ 1.16
VARS2-202ENST00000421263 FAAP100Q0VG06 881 aa22.32■■□□□ 1.16
VARS2-202ENST00000421263 MUM1L1Q5H9M0 696 aa22.32■■□□□ 1.16
VARS2-202ENST00000421263 B4GALNT3Q6L9W6 998 aa22.32■■□□□ 1.16
VARS2-202ENST00000421263 CCDC174Q6PII3 467 aa22.32■■□□□ 1.16
VARS2-202ENST00000421263 RILPL2Q969X0 211 aa22.32■■□□□ 1.16
VARS2-202ENST00000421263 TTC14Q96N46 770 aa22.32■■□□□ 1.16
VARS2-202ENST00000421263 RANBP17Q9H2T7 1088 aaKnown RBP22.32■■□□□ 1.16
VARS2-202ENST00000421263 ELP1O95163 1332 aa22.31■■□□□ 1.16
VARS2-202ENST00000421263 ASB14A6NK59 587 aa22.31■■□□□ 1.16
VARS2-202ENST00000421263 ICAM1P05362 532 aa22.31■■□□□ 1.16
VARS2-202ENST00000421263 C6orf222P0C671 652 aaPredicted RBP22.31■■□□□ 1.16
VARS2-202ENST00000421263 TTBK2Q6IQ55 1244 aa22.31■■□□□ 1.16
VARS2-202ENST00000421263 PCSK9Q8NBP7 692 aaKnown RBP22.31■■□□□ 1.16
VARS2-202ENST00000421263 TOMM22Q9NS69 142 aa22.31■■□□□ 1.16
VARS2-202ENST00000421263 CYP39A1Q9NYL5 469 aa22.31■■□□□ 1.16
VARS2-202ENST00000421263 ASTN1O14525 1302 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms