RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 BLIDQ8IZY5 108 aa13.52□□□□□ -0.24
CLCN4-203ENST00000421085 TAB3Q8N5C8 712 aaPredicted RBP13.52□□□□□ -0.24
CLCN4-203ENST00000421085 PDZD8Q8NEN9 1154 aa13.52□□□□□ -0.24
CLCN4-203ENST00000421085 NGLY1Q96IV0 654 aa13.52□□□□□ -0.24
CLCN4-203ENST00000421085 CNOT6LQ96LI5 555 aaKnown RBP13.52□□□□□ -0.24
CLCN4-203ENST00000421085 LSG1Q9H089 658 aaKnown RBP13.52□□□□□ -0.24
CLCN4-203ENST00000421085 KDM3AQ9Y4C1 1321 aa13.52□□□□□ -0.24
CLCN4-203ENST00000421085 INSRP06213 1382 aa13.52□□□□□ -0.24
CLCN4-203ENST00000421085 PDIA3P30101 505 aaKnown RBP13.52□□□□□ -0.24
CLCN4-203ENST00000421085 LRRC23Q53EV4 343 aaPredicted RBP13.52□□□□□ -0.24
CLCN4-203ENST00000421085 TPH2Q8IWU9 490 aa13.52□□□□□ -0.24
CLCN4-203ENST00000421085 SPDL1Q96EA4 605 aa13.52□□□□□ -0.24
CLCN4-203ENST00000421085 TUBGCP2Q9BSJ2 902 aa13.52□□□□□ -0.24
CLCN4-203ENST00000421085 DUOX2Q9NRD8 1548 aa13.52□□□□□ -0.25
CLCN4-203ENST00000421085 KRT19P08727 400 aa13.52□□□□□ -0.25
CLCN4-203ENST00000421085 TNNI1P19237 187 aa13.52□□□□□ -0.25
CLCN4-203ENST00000421085 PPARAQ07869 468 aa13.52□□□□□ -0.25
CLCN4-203ENST00000421085 ICE2Q659A1 982 aa13.52□□□□□ -0.25
CLCN4-203ENST00000421085 RUNDC3BQ96NL0 473 aa13.52□□□□□ -0.25
CLCN4-203ENST00000421085 LPIN2Q92539 896 aa13.52□□□□□ -0.25
CLCN4-203ENST00000421085 BBOF1Q8ND07 529 aa13.52□□□□□ -0.25
CLCN4-203ENST00000421085 HSPD1P10809 573 aaKnown RBP13.51□□□□□ -0.25
CLCN4-203ENST00000421085 MYCLP12524 364 aaPredicted RBP13.51□□□□□ -0.25
CLCN4-203ENST00000421085 TFAP4Q01664 338 aa13.51□□□□□ -0.25
CLCN4-203ENST00000421085 MMS22LQ6ZRQ5 1243 aa13.51□□□□□ -0.25
CLCN4-203ENST00000421085 NR1D1P20393 614 aa13.51□□□□□ -0.25
CLCN4-203ENST00000421085 ARMC9Q7Z3E5 817 aa13.51□□□□□ -0.25
CLCN4-203ENST00000421085 PDCD7Q8N8D1 485 aaKnown RBP13.51□□□□□ -0.25
CLCN4-203ENST00000421085 NLRP7Q8WX94 980 aa13.51□□□□□ -0.25
CLCN4-203ENST00000421085 PDE8AO60658 829 aa13.51□□□□□ -0.25
CLCN4-203ENST00000421085 ZBTB17Q13105 803 aa13.51□□□□□ -0.25
CLCN4-203ENST00000421085 SSH3Q8TE77 659 aa13.51□□□□□ -0.25
CLCN4-203ENST00000421085 MAGOHBQ96A72 148 aaKnown RBP13.51□□□□□ -0.25
CLCN4-203ENST00000421085 ARHGEF12Q9NZN5 1544 aa13.51□□□□□ -0.25
CLCN4-203ENST00000421085 IL2RBP14784 551 aa13.51□□□□□ -0.25
CLCN4-203ENST00000421085 NCKAP5LQ9HCH0 1330 aa13.51□□□□□ -0.25
CLCN4-203ENST00000421085 PPFIA2O75334 1257 aa13.51□□□□□ -0.25
CLCN4-203ENST00000421085 KAZNQ674X7 775 aa13.51□□□□□ -0.25
CLCN4-203ENST00000421085 VTI1AQ96AJ9 217 aa13.51□□□□□ -0.25
CLCN4-203ENST00000421085 LGR6Q9HBX8 967 aa13.51□□□□□ -0.25
CLCN4-203ENST00000421085 ZNF148Q9UQR1 794 aa13.51□□□□□ -0.25
CLCN4-203ENST00000421085 PLTPP55058 493 aa13.5□□□□□ -0.25
CLCN4-203ENST00000421085 GABPAQ06546 454 aa13.5□□□□□ -0.25
CLCN4-203ENST00000421085 ADAM9Q13443 819 aa13.5□□□□□ -0.25
CLCN4-203ENST00000421085 TMED1Q13445 227 aa13.5□□□□□ -0.25
CLCN4-203ENST00000421085 SMYD4Q8IYR2 804 aaPredicted RBP13.5□□□□□ -0.25
CLCN4-203ENST00000421085 FANCBQ8NB91 859 aa13.5□□□□□ -0.25
CLCN4-203ENST00000421085 MRPL46Q9H2W6 279 aaKnown RBP13.5□□□□□ -0.25
CLCN4-203ENST00000421085 ERBB4Q15303 1308 aa13.5□□□□□ -0.25
CLCN4-203ENST00000421085 URB2Q14146 1524 aaKnown RBP13.5□□□□□ -0.25
CLCN4-203ENST00000421085 PPP6R2O75170 966 aa13.5□□□□□ -0.25
CLCN4-203ENST00000421085 MOCS3O95396 460 aa13.5□□□□□ -0.25
CLCN4-203ENST00000421085 PTGDRQ13258 359 aa13.5□□□□□ -0.25
CLCN4-203ENST00000421085 ALS2CLQ60I27 953 aa13.5□□□□□ -0.25
CLCN4-203ENST00000421085 TADA2BQ86TJ2 420 aa13.5□□□□□ -0.25
CLCN4-203ENST00000421085 NOVA2Q9UNW9 492 aaKnown RBP13.5□□□□□ -0.25
CLCN4-203ENST00000421085 DAAM1Q9Y4D1 1078 aa13.5□□□□□ -0.25
CLCN4-203ENST00000421085 EEF1GP26641 437 aaKnown RBP13.5□□□□□ -0.25
CLCN4-203ENST00000421085 SLC7A5Q01650 507 aa13.5□□□□□ -0.25
CLCN4-203ENST00000421085 KRT81Q14533 505 aa13.5□□□□□ -0.25
CLCN4-203ENST00000421085 SLC39A14Q15043 492 aa13.5□□□□□ -0.25
CLCN4-203ENST00000421085 CCDC125Q86Z20 511 aa13.5□□□□□ -0.25
CLCN4-203ENST00000421085 SLC1A4P43007 532 aa13.5□□□□□ -0.25
CLCN4-203ENST00000421085 RNASELQ05823 741 aaKnown RBP13.5□□□□□ -0.25
CLCN4-203ENST00000421085 SCYL1Q96KG9 808 aa13.5□□□□□ -0.25
CLCN4-203ENST00000421085 CNOT10Q9H9A5 744 aaKnown RBP13.5□□□□□ -0.25
CLCN4-203ENST00000421085 ADAM21Q9UKJ8 722 aa13.5□□□□□ -0.25
CLCN4-203ENST00000421085 PDE6CP51160 858 aa13.5□□□□□ -0.25
CLCN4-203ENST00000421085 DHX9Q08211 1270 aaKnown RBP13.5□□□□□ -0.25
CLCN4-203ENST00000421085 MMEL1Q495T6 779 aa13.5□□□□□ -0.25
CLCN4-203ENST00000421085 ZSCAN10Q96SZ4 725 aaPredicted RBP13.5□□□□□ -0.25
CLCN4-203ENST00000421085 SPZ1Q9BXG8 430 aa13.5□□□□□ -0.25
CLCN4-203ENST00000421085 MAP3K7O43318 606 aa13.49□□□□□ -0.25
CLCN4-203ENST00000421085 DACT3Q96B18 629 aaPredicted RBP13.49□□□□□ -0.25
CLCN4-203ENST00000421085 EAF2Q96CJ1 260 aaPredicted RBP13.49□□□□□ -0.25
CLCN4-203ENST00000421085 GSDMAQ96QA5 445 aa13.49□□□□□ -0.25
CLCN4-203ENST00000421085 SH2D4AQ9H788 454 aa13.49□□□□□ -0.25
CLCN4-203ENST00000421085 TXLNGQ9NUQ3 528 aa13.49□□□□□ -0.25
CLCN4-203ENST00000421085 HMGXB3Q12766 1538 aa13.49□□□□□ -0.25
CLCN4-203ENST00000421085 DKC1O60832 514 aaKnown RBP eCLIP13.49□□□□□ -0.25
CLCN4-203ENST00000421085 SLCO1A2P46721 670 aa13.49□□□□□ -0.25
CLCN4-203ENST00000421085 BFSP1Q12934 665 aa13.49□□□□□ -0.25
CLCN4-203ENST00000421085 TAF12Q16514 161 aa13.49□□□□□ -0.25
CLCN4-203ENST00000421085 VSTM4Q8IW00 320 aa13.49□□□□□ -0.25
CLCN4-203ENST00000421085 LRGUKQ96M69 825 aa13.49□□□□□ -0.25
CLCN4-203ENST00000421085 USP44Q9H0E7 712 aa13.49□□□□□ -0.25
CLCN4-203ENST00000421085 EIF3CLB5ME19 914 aaKnown RBP13.49□□□□□ -0.25
CLCN4-203ENST00000421085 OR52Z1P0C646 297 aa13.49□□□□□ -0.25
CLCN4-203ENST00000421085 SKIP12755 728 aa13.49□□□□□ -0.25
CLCN4-203ENST00000421085 TMTC3Q6ZXV5 915 aa13.49□□□□□ -0.25
CLCN4-203ENST00000421085 IP6K1Q92551 441 aa13.49□□□□□ -0.25
CLCN4-203ENST00000421085 EIF3CQ99613 913 aaKnown RBP13.49□□□□□ -0.25
CLCN4-203ENST00000421085 FTOQ9C0B1 505 aaKnown RBP eCLIP13.49□□□□□ -0.25
CLCN4-203ENST00000421085 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.49□□□□□ -0.25
CLCN4-203ENST00000421085 ARHGEF18Q6ZSZ5 1173 aa13.49□□□□□ -0.25
CLCN4-203ENST00000421085 MAN1B1Q9UKM7 699 aa13.49□□□□□ -0.25
CLCN4-203ENST00000421085 KRT3P12035 628 aa13.49□□□□□ -0.25
CLCN4-203ENST00000421085 MESDQ14696 234 aa13.49□□□□□ -0.25
CLCN4-203ENST00000421085 CDAN1Q8IWY9 1227 aa13.49□□□□□ -0.25
CLCN4-203ENST00000421085 CABLES1Q8TDN4 633 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms