RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 SYN1P17600 705 aa21.31■■□□□ 1
ECHDC3-202ENST00000420401 MAP2K5Q13163 448 aa21.31■■□□□ 1
ECHDC3-202ENST00000420401 GRB14Q14449 540 aa21.31■■□□□ 1
ECHDC3-202ENST00000420401 CPXCR1Q8N123 301 aa21.31■■□□□ 1
ECHDC3-202ENST00000420401 USP6NLQ92738 828 aa21.31■■□□□ 1
ECHDC3-202ENST00000420401 C11orf49Q9H6J7 331 aa21.31■■□□□ 1
ECHDC3-202ENST00000420401 FRMPD2Q68DX3 1309 aaPredicted RBP21.3■■□□□ 1
ECHDC3-202ENST00000420401 SNHG28P0DPA3 235 aa21.3■■□□□ 1
ECHDC3-202ENST00000420401 ZNF543Q08ER8 600 aa21.3■■□□□ 1
ECHDC3-202ENST00000420401 SEC23AQ15436 765 aa21.3■■□□□ 1
ECHDC3-202ENST00000420401 GPATCH4Q5T3I0 446 aaKnown RBP21.3■■□□□ 1
ECHDC3-202ENST00000420401 SNRNP48Q6IEG0 339 aaKnown RBP21.3■■□□□ 1
ECHDC3-202ENST00000420401 BTNL9Q6UXG8 535 aa21.3■■□□□ 1
ECHDC3-202ENST00000420401 Q7L0L9 218 aa21.3■■□□□ 1
ECHDC3-202ENST00000420401 RASGRP2Q7LDG7 609 aa21.3■■□□□ 1
ECHDC3-202ENST00000420401 ABRAQ8N0Z2 381 aa21.3■■□□□ 1
ECHDC3-202ENST00000420401 APBA2Q99767 749 aa21.3■■□□□ 1
ECHDC3-202ENST00000420401 GPCPD1Q9NPB8 672 aa21.3■■□□□ 1
ECHDC3-202ENST00000420401 PRR12Q9ULL5 1215 aa21.3■■□□□ 1
ECHDC3-202ENST00000420401 FCER1AP12319 257 aa21.29■■□□□ 1
ECHDC3-202ENST00000420401 ZKSCAN1P17029 563 aaPredicted RBP21.29■■□□□ 1
ECHDC3-202ENST00000420401 LRIT3Q3SXY7 679 aa21.29■■□□□ 1
ECHDC3-202ENST00000420401 TTBK2Q6IQ55 1244 aa21.29■■□□□ 1
ECHDC3-202ENST00000420401 DPP9Q86TI2 863 aa21.29■■□□□ 1
ECHDC3-202ENST00000420401 MB21D2Q8IYB1 491 aaPredicted RBP21.29■■□□□ 1
ECHDC3-202ENST00000420401 RAVER2Q9HCJ3 691 aaKnown RBP21.29■■□□□ 1
ECHDC3-202ENST00000420401 SLC5A4Q9NY91 659 aa21.29■■□□□ 1
ECHDC3-202ENST00000420401 PARP14Q460N5 1801 aa21.29■■□□□ 1
ECHDC3-202ENST00000420401 MCM5P33992 734 aa21.28■■□□□ 1
ECHDC3-202ENST00000420401 MAGEA10P43363 369 aaPredicted RBP21.28■■□□□ 1
ECHDC3-202ENST00000420401 SLC4A3P48751 1232 aa21.28■■□□□ 1
ECHDC3-202ENST00000420401 KCTD2Q14681 263 aa21.28■■□□□ 1
ECHDC3-202ENST00000420401 WTAPQ15007 396 aa21.28■■□□□ 1
ECHDC3-202ENST00000420401 TMEM67Q5HYA8 995 aa21.28■■□□□ 1
ECHDC3-202ENST00000420401 SYDE2Q5VT97 1194 aa21.28■■□□□ 1
ECHDC3-202ENST00000420401 CHST3Q7LGC8 479 aa21.28■■□□□ 1
ECHDC3-202ENST00000420401 TDHQ8IZJ6 230 aa21.28■■□□□ 1
ECHDC3-202ENST00000420401 MTA3Q9BTC8 594 aa21.28■■□□□ 1
ECHDC3-202ENST00000420401 UBE2OQ9C0C9 1292 aaKnown RBP21.28■■□□□ 1
ECHDC3-202ENST00000420401 STXBP5LQ9Y2K9 1186 aa21.28■■□□□ 1
ECHDC3-202ENST00000420401 HOXC6P09630 235 aa21.27■■□□□ 1
ECHDC3-202ENST00000420401 PARP1P09874 1014 aaKnown RBP21.27■■□□□ 1
ECHDC3-202ENST00000420401 ADORA2AP29274 412 aa21.27■■□□□ 1
ECHDC3-202ENST00000420401 SLC16A2P36021 539 aa21.27■■□□□ 1
ECHDC3-202ENST00000420401 TRIM32Q13049 653 aa21.27■■□□□ 1
ECHDC3-202ENST00000420401 KRT32Q14532 448 aa21.27■■□□□ 1
ECHDC3-202ENST00000420401 ASPRV1Q53RT3 343 aa21.27■■□□□ 1
ECHDC3-202ENST00000420401 MMP19Q99542 508 aa21.27■■□□□ 1
ECHDC3-202ENST00000420401 FBXO40Q9UH90 709 aa21.27■■□□□ 1
ECHDC3-202ENST00000420401 PLXNB2O15031 1838 aa21.27■□□□□ 0.99
ECHDC3-202ENST00000420401 PRC1O43663 620 aa21.26■□□□□ 0.99
ECHDC3-202ENST00000420401 GOLGA8HP0CJ92 632 aa21.26■□□□□ 0.99
ECHDC3-202ENST00000420401 ANTXR2P58335 489 aa21.26■□□□□ 0.99
ECHDC3-202ENST00000420401 TSGA10IPQ3SY00 556 aa21.26■□□□□ 0.99
ECHDC3-202ENST00000420401 CCDC174Q6PII3 467 aa21.26■□□□□ 0.99
ECHDC3-202ENST00000420401 CHST13Q8NET6 341 aa21.26■□□□□ 0.99
ECHDC3-202ENST00000420401 TRIB2Q92519 343 aa21.26■□□□□ 0.99
ECHDC3-202ENST00000420401 RANBP17Q9H2T7 1088 aaKnown RBP21.26■□□□□ 0.99
ECHDC3-202ENST00000420401 PNMA2Q9UL42 364 aa21.26■□□□□ 0.99
ECHDC3-202ENST00000420401 RIPK3Q9Y572 518 aa21.26■□□□□ 0.99
ECHDC3-202ENST00000420401 TKFCQ3LXA3 575 aa21.25■□□□□ 0.99
ECHDC3-202ENST00000420401 TMTC2Q8N394 836 aa21.25■□□□□ 0.99
ECHDC3-202ENST00000420401 IGDCC4Q8TDY8 1250 aa21.25■□□□□ 0.99
ECHDC3-202ENST00000420401 TMEM87BQ96K49 555 aa21.25■□□□□ 0.99
ECHDC3-202ENST00000420401 NEK1Q96PY6 1258 aa21.25■□□□□ 0.99
ECHDC3-202ENST00000420401 OGDHLQ9ULD0 1010 aa21.25■□□□□ 0.99
ECHDC3-202ENST00000420401 EPB41L2O43491 1005 aaKnown RBP21.24■□□□□ 0.99
ECHDC3-202ENST00000420401 SNAP25P60880 206 aa21.24■□□□□ 0.99
ECHDC3-202ENST00000420401 CATIPQ7Z7H3 387 aa21.24■□□□□ 0.99
ECHDC3-202ENST00000420401 AGBL1Q96MI9 1066 aa21.24■□□□□ 0.99
ECHDC3-202ENST00000420401 MTMR10Q9NXD2 777 aa21.24■□□□□ 0.99
ECHDC3-202ENST00000420401 ZNF536O15090 1300 aa21.24■□□□□ 0.99
ECHDC3-202ENST00000420401 COL11A1P12107 1806 aaPredicted RBP21.23■□□□□ 0.99
ECHDC3-202ENST00000420401 COBLO75128 1261 aa21.23■□□□□ 0.99
ECHDC3-202ENST00000420401 ICAM1P05362 532 aa21.23■□□□□ 0.99
ECHDC3-202ENST00000420401 PRKAR2AP13861 404 aaKnown RBP21.23■□□□□ 0.99
ECHDC3-202ENST00000420401 HSPA4P34932 840 aa21.23■□□□□ 0.99
ECHDC3-202ENST00000420401 CCL14Q16627 93 aa21.23■□□□□ 0.99
ECHDC3-202ENST00000420401 MFSD14CQ5VZR4 134 aa21.23■□□□□ 0.99
ECHDC3-202ENST00000420401 RASEFQ8IZ41 740 aa21.23■□□□□ 0.99
ECHDC3-202ENST00000420401 DDX11Q96FC9 970 aa21.23■□□□□ 0.99
ECHDC3-202ENST00000420401 CCPG1Q9ULG6 757 aa21.23■□□□□ 0.99
ECHDC3-202ENST00000420401 HMGB1P09429 215 aaKnown RBP21.22■□□□□ 0.99
ECHDC3-202ENST00000420401 ALAS1P13196 640 aa21.22■□□□□ 0.99
ECHDC3-202ENST00000420401 OLFML2BQ68BL8 750 aa21.22■□□□□ 0.99
ECHDC3-202ENST00000420401 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.22■□□□□ 0.99
ECHDC3-202ENST00000420401 ANKRD35Q8N283 1001 aa21.22■□□□□ 0.99
ECHDC3-202ENST00000420401 NPLOC4Q8TAT6 608 aa21.22■□□□□ 0.99
ECHDC3-202ENST00000420401 KCNB2Q92953 911 aa21.22■□□□□ 0.99
ECHDC3-202ENST00000420401 TRERF1Q96PN7 1200 aa21.22■□□□□ 0.99
ECHDC3-202ENST00000420401 UBA5Q9GZZ9 404 aa21.22■□□□□ 0.99
ECHDC3-202ENST00000420401 ACAD9Q9H845 621 aa21.22■□□□□ 0.99
ECHDC3-202ENST00000420401 LY9Q9HBG7 655 aa21.22■□□□□ 0.99
ECHDC3-202ENST00000420401 SENP2Q9HC62 589 aa21.22■□□□□ 0.99
ECHDC3-202ENST00000420401 HOMER2Q9NSB8 354 aa21.22■□□□□ 0.99
ECHDC3-202ENST00000420401 SH2B2O14492 632 aaPredicted RBP21.21■□□□□ 0.99
ECHDC3-202ENST00000420401 EIF5BO60841 1220 aaKnown RBP21.21■□□□□ 0.99
ECHDC3-202ENST00000420401 NFXL1Q6ZNB6 911 aa21.21■□□□□ 0.99
ECHDC3-202ENST00000420401 RNF146Q9NTX7 359 aa21.21■□□□□ 0.99
ECHDC3-202ENST00000420401 DIS3Q9Y2L1 958 aaKnown RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms