RNA–Protein interactions for RNA: ENST00000420163.1

SEC22C-206, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-206ENST00000420163 ASPRV1Q53RT3 343 aa19.36■□□□□ 0.69
SEC22C-206ENST00000420163 USP26Q9BXU7 913 aa19.36■□□□□ 0.69
SEC22C-206ENST00000420163 FLRT1Q9NZU1 646 aa19.36■□□□□ 0.69
SEC22C-206ENST00000420163 STRNO43815 780 aa19.35■□□□□ 0.69
SEC22C-206ENST00000420163 PARP1P09874 1014 aaKnown RBP19.35■□□□□ 0.69
SEC22C-206ENST00000420163 XRCC5P13010 732 aaKnown RBP19.35■□□□□ 0.69
SEC22C-206ENST00000420163 COPB2P35606 906 aa19.35■□□□□ 0.69
SEC22C-206ENST00000420163 GRM4Q14833 912 aa19.35■□□□□ 0.69
SEC22C-206ENST00000420163 SLC35G1Q2M3R5 365 aa19.35■□□□□ 0.69
SEC22C-206ENST00000420163 NBPF11Q86T75 865 aa19.35■□□□□ 0.69
SEC22C-206ENST00000420163 TMEM87BQ96K49 555 aa19.35■□□□□ 0.69
SEC22C-206ENST00000420163 MMP19Q99542 508 aa19.35■□□□□ 0.69
SEC22C-206ENST00000420163 MTA3Q9BTC8 594 aa19.35■□□□□ 0.69
SEC22C-206ENST00000420163 MYL10Q9BUA6 226 aa19.35■□□□□ 0.69
SEC22C-206ENST00000420163 HOMER2Q9NSB8 354 aa19.35■□□□□ 0.69
SEC22C-206ENST00000420163 BIN2Q9UBW5 565 aaPredicted RBP19.35■□□□□ 0.69
SEC22C-206ENST00000420163 MAD2L2Q9UI95 211 aa19.35■□□□□ 0.69
SEC22C-206ENST00000420163 PGK2P07205 417 aa19.34■□□□□ 0.69
SEC22C-206ENST00000420163 HOXC6P09630 235 aa19.34■□□□□ 0.69
SEC22C-206ENST00000420163 FCER1AP12319 257 aa19.34■□□□□ 0.69
SEC22C-206ENST00000420163 EXOSC10Q01780 885 aaKnown RBP19.34■□□□□ 0.69
SEC22C-206ENST00000420163 KRT32Q14532 448 aa19.34■□□□□ 0.69
SEC22C-206ENST00000420163 ZNF654Q8IZM8 581 aa19.34■□□□□ 0.69
SEC22C-206ENST00000420163 ABRAQ8N0Z2 381 aa19.34■□□□□ 0.69
SEC22C-206ENST00000420163 JAKMIP1Q96N16 626 aaKnown RBP19.34■□□□□ 0.69
SEC22C-206ENST00000420163 RNF146Q9NTX7 359 aa19.34■□□□□ 0.69
SEC22C-206ENST00000420163 FRMPD3Q5JV73 1810 aa19.34■□□□□ 0.69
SEC22C-206ENST00000420163 PALM3A6NDB9 673 aaPredicted RBP19.33■□□□□ 0.68
SEC22C-206ENST00000420163 EPB41L2O43491 1005 aaKnown RBP19.33■□□□□ 0.68
SEC22C-206ENST00000420163 HMGCRP04035 888 aa19.33■□□□□ 0.68
SEC22C-206ENST00000420163 ICAM1P05362 532 aa19.33■□□□□ 0.68
SEC22C-206ENST00000420163 ALAS1P13196 640 aa19.33■□□□□ 0.68
SEC22C-206ENST00000420163 KCTD2Q14681 263 aa19.33■□□□□ 0.68
SEC22C-206ENST00000420163 DHX32Q7L7V1 743 aaKnown RBP19.33■□□□□ 0.68
SEC22C-206ENST00000420163 RAB11FIP4Q86YS3 637 aa19.33■□□□□ 0.68
SEC22C-206ENST00000420163 ADGRF4Q8IZF3 695 aa19.33■□□□□ 0.68
SEC22C-206ENST00000420163 UNC93B1Q9H1C4 597 aa19.33■□□□□ 0.68
SEC22C-206ENST00000420163 CCPG1Q9ULG6 757 aa19.33■□□□□ 0.68
SEC22C-206ENST00000420163 WDR19Q8NEZ3 1342 aa19.32■□□□□ 0.68
SEC22C-206ENST00000420163 POTEFA5A3E0 1075 aa19.32■□□□□ 0.68
SEC22C-206ENST00000420163 KLRF2D3W0D1 207 aa19.32■□□□□ 0.68
SEC22C-206ENST00000420163 SEC24BO95487 1268 aa19.32■□□□□ 0.68
SEC22C-206ENST00000420163 CCL5P13501 91 aa19.32■□□□□ 0.68
SEC22C-206ENST00000420163 LIFRP42702 1097 aa19.32■□□□□ 0.68
SEC22C-206ENST00000420163 UBXN2AP68543 259 aa19.32■□□□□ 0.68
SEC22C-206ENST00000420163 MUM1L1Q5H9M0 696 aa19.32■□□□□ 0.68
SEC22C-206ENST00000420163 CATIPQ7Z7H3 387 aa19.32■□□□□ 0.68
SEC22C-206ENST00000420163 DPP9Q86TI2 863 aa19.32■□□□□ 0.68
SEC22C-206ENST00000420163 IGHA2P01877 340 aa19.31■□□□□ 0.68
SEC22C-206ENST00000420163 RXRAP19793 462 aa19.31■□□□□ 0.68
SEC22C-206ENST00000420163 CDC37Q16543 378 aaPredicted RBP19.31■□□□□ 0.68
SEC22C-206ENST00000420163 NFXL1Q6ZNB6 911 aa19.31■□□□□ 0.68
SEC22C-206ENST00000420163 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.31■□□□□ 0.68
SEC22C-206ENST00000420163 CHST13Q8NET6 341 aa19.31■□□□□ 0.68
SEC22C-206ENST00000420163 NUP133Q8WUM0 1156 aa19.31■□□□□ 0.68
SEC22C-206ENST00000420163 TRERF1Q96PN7 1200 aa19.31■□□□□ 0.68
SEC22C-206ENST00000420163 JMJD4Q9H9V9 463 aa19.31■□□□□ 0.68
SEC22C-206ENST00000420163 VAT1LQ9HCJ6 419 aa19.31■□□□□ 0.68
SEC22C-206ENST00000420163 CCDC69A6NI79 296 aa19.3■□□□□ 0.68
SEC22C-206ENST00000420163 DDAH1O94760 285 aa19.3■□□□□ 0.68
SEC22C-206ENST00000420163 QRICH1Q2TAL8 776 aa19.3■□□□□ 0.68
SEC22C-206ENST00000420163 ZNF792Q3KQV3 632 aa19.3■□□□□ 0.68
SEC22C-206ENST00000420163 TKFCQ3LXA3 575 aa19.3■□□□□ 0.68
SEC22C-206ENST00000420163 MAP3K21Q5TCX8 1036 aa19.3■□□□□ 0.68
SEC22C-206ENST00000420163 SGMS1Q86VZ5 419 aa19.3■□□□□ 0.68
SEC22C-206ENST00000420163 MAML3Q96JK9 1138 aa19.3■□□□□ 0.68
SEC22C-206ENST00000420163 ACAD9Q9H845 621 aa19.3■□□□□ 0.68
SEC22C-206ENST00000420163 FBXO40Q9UH90 709 aa19.3■□□□□ 0.68
SEC22C-206ENST00000420163 DNAJC25-GNG10A0A024R161 153 aa19.29■□□□□ 0.68
SEC22C-206ENST00000420163 CYTH3O43739 400 aa19.29■□□□□ 0.68
SEC22C-206ENST00000420163 DHX16O60231 1041 aaKnown RBP19.29■□□□□ 0.68
SEC22C-206ENST00000420163 PRKAR2AP13861 404 aaKnown RBP19.29■□□□□ 0.68
SEC22C-206ENST00000420163 CYP2C19P33261 490 aa19.29■□□□□ 0.68
SEC22C-206ENST00000420163 CACNB2Q08289 660 aaPredicted RBP19.29■□□□□ 0.68
SEC22C-206ENST00000420163 BLOC1S2Q6QNY1 142 aa19.29■□□□□ 0.68
SEC22C-206ENST00000420163 CCDC144CPQ8IYA2 1237 aa19.29■□□□□ 0.68
SEC22C-206ENST00000420163 TRMT44Q8IYL2 757 aaKnown RBP19.29■□□□□ 0.68
SEC22C-206ENST00000420163 ANKRD35Q8N283 1001 aa19.29■□□□□ 0.68
SEC22C-206ENST00000420163 TMTC2Q8N394 836 aa19.29■□□□□ 0.68
SEC22C-206ENST00000420163 FGD4Q96M96 766 aa19.29■□□□□ 0.68
SEC22C-206ENST00000420163 RNF208Q9H0X6 261 aa19.29■□□□□ 0.68
SEC22C-206ENST00000420163 A1CFQ9NQ94 594 aaKnown RBP19.29■□□□□ 0.68
SEC22C-206ENST00000420163 BRPF3Q9ULD4 1205 aa19.29■□□□□ 0.68
SEC22C-206ENST00000420163 GTF3C3Q9Y5Q9 886 aa19.29■□□□□ 0.68
SEC22C-206ENST00000420163 LRRC37A2A6NM11 1700 aa19.28■□□□□ 0.68
SEC22C-206ENST00000420163 NFIBO00712 420 aa19.28■□□□□ 0.68
SEC22C-206ENST00000420163 HMGB1P09429 215 aaKnown RBP19.28■□□□□ 0.68
SEC22C-206ENST00000420163 CASTP20810 708 aaKnown RBP19.28■□□□□ 0.68
SEC22C-206ENST00000420163 RPS6KB1P23443 525 aa19.28■□□□□ 0.68
SEC22C-206ENST00000420163 USH1GQ495M9 461 aa19.28■□□□□ 0.68
SEC22C-206ENST00000420163 C8orf34Q49A92 452 aa19.28■□□□□ 0.68
SEC22C-206ENST00000420163 OLFML2BQ68BL8 750 aa19.28■□□□□ 0.68
SEC22C-206ENST00000420163 CLEC4DQ8WXI8 215 aa19.28■□□□□ 0.68
SEC22C-206ENST00000420163 MTMR8Q96EF0 704 aa19.28■□□□□ 0.68
SEC22C-206ENST00000420163 DDX11Q96FC9 970 aa19.28■□□□□ 0.68
SEC22C-206ENST00000420163 MAP3K14Q99558 947 aa19.28■□□□□ 0.68
SEC22C-206ENST00000420163 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.28■□□□□ 0.68
SEC22C-206ENST00000420163 PPP1R11O60927 126 aaPredicted RBP19.27■□□□□ 0.68
SEC22C-206ENST00000420163 PLEKHA8P1O95397 391 aa19.27■□□□□ 0.68
SEC22C-206ENST00000420163 CCND3P30281 292 aaPredicted RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms