RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 TRDNQ13061 729 aa23.84■■□□□ 1.41
GTF3A-202ENST00000419181 SYDE2Q5VT97 1194 aa23.84■■□□□ 1.41
GTF3A-202ENST00000419181 UBAC1Q9BSL1 405 aa23.84■■□□□ 1.41
GTF3A-202ENST00000419181 LSG1Q9H089 658 aaKnown RBP23.84■■□□□ 1.41
GTF3A-202ENST00000419181 RANBP17Q9H2T7 1088 aaKnown RBP23.84■■□□□ 1.41
GTF3A-202ENST00000419181 KAT14Q9H8E8 782 aa23.84■■□□□ 1.41
GTF3A-202ENST00000419181 HOMER2Q9NSB8 354 aa23.84■■□□□ 1.41
GTF3A-202ENST00000419181 RBM8AQ9Y5S9 174 aaKnown RBP23.84■■□□□ 1.41
GTF3A-202ENST00000419181 MNX1P50219 401 aaPredicted RBP23.83■■□□□ 1.41
GTF3A-202ENST00000419181 TKFCQ3LXA3 575 aa23.83■■□□□ 1.41
GTF3A-202ENST00000419181 CCDC174Q6PII3 467 aa23.83■■□□□ 1.41
GTF3A-202ENST00000419181 KIAA1211Q6ZU35 1233 aa23.83■■□□□ 1.41
GTF3A-202ENST00000419181 CYB5R4Q7L1T6 521 aa23.83■■□□□ 1.41
GTF3A-202ENST00000419181 DDX11Q96FC9 970 aa23.83■■□□□ 1.41
GTF3A-202ENST00000419181 ACAD9Q9H845 621 aa23.83■■□□□ 1.41
GTF3A-202ENST00000419181 SMCHD1A6NHR9 2005 aa23.83■■□□□ 1.4
GTF3A-202ENST00000419181 CEP290O15078 2479 aa23.82■■□□□ 1.4
GTF3A-202ENST00000419181 E7EWF7 191 aa23.82■■□□□ 1.4
GTF3A-202ENST00000419181 MSCO60682 206 aa23.82■■□□□ 1.4
GTF3A-202ENST00000419181 ICAM1P05362 532 aa23.82■■□□□ 1.4
GTF3A-202ENST00000419181 SEC23AQ15436 765 aa23.82■■□□□ 1.4
GTF3A-202ENST00000419181 GPATCH4Q5T3I0 446 aaKnown RBP23.82■■□□□ 1.4
GTF3A-202ENST00000419181 STOX1Q6ZVD7 989 aa23.82■■□□□ 1.4
GTF3A-202ENST00000419181 ANKRD35Q8N283 1001 aa23.82■■□□□ 1.4
GTF3A-202ENST00000419181 DIS3LQ8TF46 1054 aaKnown RBP23.82■■□□□ 1.4
GTF3A-202ENST00000419181 PAWRQ96IZ0 340 aaKnown RBP23.82■■□□□ 1.4
GTF3A-202ENST00000419181 TINF2Q9BSI4 451 aa23.82■■□□□ 1.4
GTF3A-202ENST00000419181 RNF146Q9NTX7 359 aa23.82■■□□□ 1.4
GTF3A-202ENST00000419181 DDX20Q9UHI6 824 aaKnown RBP23.82■■□□□ 1.4
GTF3A-202ENST00000419181 CNGA1P29973 690 aa23.81■■□□□ 1.4
GTF3A-202ENST00000419181 DPF3Q92784 378 aa23.81■■□□□ 1.4
GTF3A-202ENST00000419181 NRBP1Q9UHY1 535 aa23.81■■□□□ 1.4
GTF3A-202ENST00000419181 GOLGA8HP0CJ92 632 aa23.8■■□□□ 1.4
GTF3A-202ENST00000419181 ALAS1P13196 640 aa23.8■■□□□ 1.4
GTF3A-202ENST00000419181 IFIT1BQ5T764 474 aaKnown RBP23.8■■□□□ 1.4
GTF3A-202ENST00000419181 NECAB2Q7Z6G3 386 aa23.8■■□□□ 1.4
GTF3A-202ENST00000419181 RALYLQ86SE5 291 aaKnown RBP23.8■■□□□ 1.4
GTF3A-202ENST00000419181 MSL3Q8N5Y2 521 aaKnown RBP23.8■■□□□ 1.4
GTF3A-202ENST00000419181 NCOA7Q8NI08 942 aa23.8■■□□□ 1.4
GTF3A-202ENST00000419181 TRERF1Q96PN7 1200 aa23.8■■□□□ 1.4
GTF3A-202ENST00000419181 HTATIP2Q9BUP3 242 aa23.8■■□□□ 1.4
GTF3A-202ENST00000419181 CCPG1Q9ULG6 757 aa23.8■■□□□ 1.4
GTF3A-202ENST00000419181 SEPT4O43236 478 aa23.79■■□□□ 1.4
GTF3A-202ENST00000419181 PRAMEF19Q5SWL8 479 aa23.79■■□□□ 1.4
GTF3A-202ENST00000419181 MAMDC4Q6UXC1 1216 aa23.79■■□□□ 1.4
GTF3A-202ENST00000419181 ZNF467Q7Z7K2 595 aaPredicted RBP23.79■■□□□ 1.4
GTF3A-202ENST00000419181 FGD4Q96M96 766 aa23.79■■□□□ 1.4
GTF3A-202ENST00000419181 A1CFQ9NQ94 594 aaKnown RBP23.79■■□□□ 1.4
GTF3A-202ENST00000419181 CDC45O75419 566 aa23.78■■□□□ 1.4
GTF3A-202ENST00000419181 ASPRV1Q53RT3 343 aa23.78■■□□□ 1.4
GTF3A-202ENST00000419181 MUM1L1Q5H9M0 696 aa23.78■■□□□ 1.4
GTF3A-202ENST00000419181 ANO2Q9NQ90 1003 aa23.78■■□□□ 1.4
GTF3A-202ENST00000419181 ALPK3Q96L96 1907 aa23.78■■□□□ 1.4
GTF3A-202ENST00000419181 SYNGAP1Q96PV0 1343 aa23.78■■□□□ 1.4
GTF3A-202ENST00000419181 MCM3APO60318 1980 aa23.78■■□□□ 1.4
GTF3A-202ENST00000419181 TAL1P17542 331 aaPredicted RBP23.77■■□□□ 1.4
GTF3A-202ENST00000419181 MB21D2Q8IYB1 491 aaPredicted RBP23.77■■□□□ 1.4
GTF3A-202ENST00000419181 FAM133AQ8N9E0 248 aa23.77■■□□□ 1.4
GTF3A-202ENST00000419181 CPVLQ9H3G5 476 aa23.77■■□□□ 1.4
GTF3A-202ENST00000419181 PFASO15067 1338 aa23.77■■□□□ 1.4
GTF3A-202ENST00000419181 LCTP09848 1927 aa23.76■■□□□ 1.39
GTF3A-202ENST00000419181 IFIT3O14879 490 aaKnown RBP23.76■■□□□ 1.39
GTF3A-202ENST00000419181 CENPBP07199 599 aaPredicted RBP23.76■■□□□ 1.39
GTF3A-202ENST00000419181 ANTXR2P58335 489 aa23.76■■□□□ 1.39
GTF3A-202ENST00000419181 CNTN2Q02246 1040 aa23.76■■□□□ 1.39
GTF3A-202ENST00000419181 NECTIN1Q15223 517 aa23.76■■□□□ 1.39
GTF3A-202ENST00000419181 CASC1Q6TDU7 716 aa23.76■■□□□ 1.39
GTF3A-202ENST00000419181 UBA5Q9GZZ9 404 aa23.76■■□□□ 1.39
GTF3A-202ENST00000419181 C11orf49Q9H6J7 331 aa23.76■■□□□ 1.39
GTF3A-202ENST00000419181 PNMA2Q9UL42 364 aa23.76■■□□□ 1.39
GTF3A-202ENST00000419181 CNPY2Q9Y2B0 182 aa23.76■■□□□ 1.39
GTF3A-202ENST00000419181 WDR19Q8NEZ3 1342 aa23.76■■□□□ 1.39
GTF3A-202ENST00000419181 POTEB2H3BUK9 544 aa23.75■■□□□ 1.39
GTF3A-202ENST00000419181 SLC27A2O14975 620 aa23.75■■□□□ 1.39
GTF3A-202ENST00000419181 SNAI1O95863 264 aaPredicted RBP23.75■■□□□ 1.39
GTF3A-202ENST00000419181 PARP1P09874 1014 aaKnown RBP23.75■■□□□ 1.39
GTF3A-202ENST00000419181 ZNF865P0CJ78 1059 aaPredicted RBP23.75■■□□□ 1.39
GTF3A-202ENST00000419181 COL6A1P12109 1028 aa23.75■■□□□ 1.39
GTF3A-202ENST00000419181 ERICH6BQ5W0A0 696 aa23.75■■□□□ 1.39
GTF3A-202ENST00000419181 CYP39A1Q9NYL5 469 aa23.75■■□□□ 1.39
GTF3A-202ENST00000419181 ERICH2A1L162 156 aa23.74■■□□□ 1.39
GTF3A-202ENST00000419181 H0YGN5 161 aa23.74■■□□□ 1.39
GTF3A-202ENST00000419181 SART3Q15020 963 aaKnown RBP23.74■■□□□ 1.39
GTF3A-202ENST00000419181 CREB3L3Q68CJ9 461 aa23.74■■□□□ 1.39
GTF3A-202ENST00000419181 CHST3Q7LGC8 479 aa23.74■■□□□ 1.39
GTF3A-202ENST00000419181 SENP2Q9HC62 589 aa23.74■■□□□ 1.39
GTF3A-202ENST00000419181 ANO1Q5XXA6 986 aa23.73■■□□□ 1.39
GTF3A-202ENST00000419181 ADGRF4Q8IZF3 695 aa23.73■■□□□ 1.39
GTF3A-202ENST00000419181 PPP4R2Q9NY27 417 aa23.73■■□□□ 1.39
GTF3A-202ENST00000419181 MYH6P13533 1939 aa23.72■■□□□ 1.39
GTF3A-202ENST00000419181 SOWAHBA6NEL2 793 aa23.72■■□□□ 1.39
GTF3A-202ENST00000419181 NFIBO00712 420 aa23.72■■□□□ 1.39
GTF3A-202ENST00000419181 WTAPQ15007 396 aa23.72■■□□□ 1.39
GTF3A-202ENST00000419181 CDC37Q16543 378 aaPredicted RBP23.72■■□□□ 1.39
GTF3A-202ENST00000419181 NSMFQ6X4W1 530 aa23.72■■□□□ 1.39
GTF3A-202ENST00000419181 ARMCX2Q7L311 632 aa23.72■■□□□ 1.39
GTF3A-202ENST00000419181 STAG2Q8N3U4 1231 aa23.72■■□□□ 1.39
GTF3A-202ENST00000419181 IGDCC4Q8TDY8 1250 aa23.72■■□□□ 1.39
GTF3A-202ENST00000419181 CLEC4DQ8WXI8 215 aa23.72■■□□□ 1.39
GTF3A-202ENST00000419181 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms