RNA–Protein interactions for RNA: ENST00000418378.5

SPARCL1-202, Transcript of SPARC like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SPARCL1, Length 2,994 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-202ENST00000418378 RBSNQ9H1K0 784 aa6.49□□□□□ -1.37
SPARCL1-202ENST00000418378 SUDS3Q9H7L9 328 aaPredicted RBP6.49□□□□□ -1.37
SPARCL1-202ENST00000418378 ZNF408Q9H9D4 720 aa6.49□□□□□ -1.37
SPARCL1-202ENST00000418378 SWAP70Q9UH65 585 aa6.49□□□□□ -1.37
SPARCL1-202ENST00000418378 IRS2Q9Y4H2 1338 aa6.49□□□□□ -1.37
SPARCL1-202ENST00000418378 RFX7Q2KHR2 1363 aa6.49□□□□□ -1.37
SPARCL1-202ENST00000418378 SMCHD1A6NHR9 2005 aa6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 GH2P01242 217 aa6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 ATXN8OSP0DMR3 200 aa6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 ABCD1P33897 745 aa6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 ECE1P42892 770 aa6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 UBXN2AP68543 259 aa6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 KIAA2012Q0VF49 1180 aa6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 IFT88Q13099 833 aa6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 RESTQ13127 1097 aa6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 JAKMIP3Q5VZ66 844 aa6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 RCSD1Q6JBY9 416 aa6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 ZCCHC8Q6NZY4 707 aaKnown RBP6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 ILDR2Q71H61 639 aa6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 CCAR1Q8IX12 1150 aaKnown RBP6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 GRAMD1CQ8IYS0 662 aa6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 EEF2KMTQ96G04 330 aa6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 GLIS2Q9BZE0 524 aaPredicted RBP6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 GRPEL1Q9HAV7 217 aa6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 CHST12Q9NRB3 414 aa6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 HOMER2Q9NSB8 354 aa6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 DMGDHQ9UI17 866 aaKnown RBP6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 PCDHB6Q9Y5E3 794 aa6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 KLRF2D3W0D1 207 aa6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 PEX10O60683 326 aa6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 JAG1P78504 1218 aa6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 TROAPQ12815 778 aa6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 SAFBQ15424 915 aaKnown RBP eCLIP6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 USP49Q70CQ1 688 aa6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 KRI1Q8N9T8 703 aaKnown RBP6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 SHISA4Q96DD7 197 aa6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 PIGSQ96S52 555 aa6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 MTFR1LQ9H019 292 aa6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 BIN2Q9UBW5 565 aaPredicted RBP6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 KIF3AQ9Y496 699 aa6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 DDNO94850 711 aaPredicted RBP6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 HLA-DOAP06340 250 aa6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 SEC23AQ15436 765 aa6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 NTRK3Q16288 839 aa6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 CCDC144BQ3MJ40 725 aa6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 CERKLQ49MI3 558 aaPredicted RBP6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 TYW1BQ6NUM6 668 aa6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 SH3BP5LQ7L8J4 393 aa6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 SPC24Q8NBT2 197 aa6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 SMARCC2Q8TAQ2 1214 aa6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 CCDC47Q96A33 483 aaKnown RBP6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 AGBL1Q96MI9 1066 aa6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 OSBPL5Q9H0X9 879 aaPredicted RBP6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 TNMDQ9H2S6 317 aa6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 TMOD2Q9NZR1 351 aa6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 FAM198AQ9UFP1 575 aa6.48□□□□□ -1.37
SPARCL1-202ENST00000418378 COL11A2P13942 1736 aaPredicted RBP6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 KLRG2A4D1S0 409 aaPredicted RBP6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 NFKBIEO00221 500 aa6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 SORBS3O60504 671 aa6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 NASPP49321 788 aaPredicted RBP6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 ZBED6P86452 979 aa6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 KIF23Q02241 960 aaPredicted RBP6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 ALX1Q15699 326 aa6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 MYSM1Q5VVJ2 828 aa6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 ZSCAN30Q86W11 494 aa6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 SLF2Q8IX21 1173 aa6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 MICALL2Q8IY33 904 aa6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 C7orf43Q8WVR3 580 aa6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 GOLPH3LQ9H4A5 285 aa6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 DNAJC18Q9H819 358 aa6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 POLD4Q9HCU8 107 aa6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 USP25Q9UHP3 1055 aa6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 PCDHA7Q9UN72 937 aa6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 CCDC88AQ3V6T2 1871 aa6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 FOXN1O15353 648 aa6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 CYTH3O43739 400 aa6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 HIP1RO75146 1068 aa6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 EIF3JO75822 258 aaKnown RBP6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 CDKL5O76039 1030 aa6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 AFMP43652 599 aa6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 GMPSP49915 693 aaPredicted RBP6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 PRELPP51888 382 aa6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 UBE2HP62256 183 aa6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 RRP1BQ14684 758 aaKnown RBP6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 GPR162Q16538 588 aa6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 UBE2SQ16763 222 aa6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 EAPPQ56P03 285 aaPredicted RBP6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 STRIP1Q5VSL9 837 aa6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 STYK1Q6J9G0 422 aa6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 CCDC174Q6PII3 467 aa6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 NT5DC4Q86YG4 428 aa6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 CPXCR1Q8N123 301 aa6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 ACER1Q8TDN7 264 aa6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 FEZ1Q99689 392 aa6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 CD248Q9HCU0 757 aa6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 TMEM260Q9NX78 707 aa6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 ZNF232Q9UNY5 417 aa6.47□□□□□ -1.37
SPARCL1-202ENST00000418378 SLC45A1Q9Y2W3 748 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms