RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-208ENST00000418212 ANKRD35Q8N283 1001 aa14.65□□□□□ -0.06
BDNF-208ENST00000418212 NUP58Q9BVL2 599 aa14.65□□□□□ -0.06
BDNF-208ENST00000418212 ABCA6Q8N139 1617 aa14.65□□□□□ -0.06
BDNF-208ENST00000418212 XRCC5P13010 732 aaKnown RBP14.65□□□□□ -0.06
BDNF-208ENST00000418212 CASP1P29466 404 aa14.65□□□□□ -0.06
BDNF-208ENST00000418212 TNNC1P63316 161 aa14.65□□□□□ -0.06
BDNF-208ENST00000418212 TRPC3Q13507 836 aa14.65□□□□□ -0.06
BDNF-208ENST00000418212 GPATCH4Q5T3I0 446 aaKnown RBP14.65□□□□□ -0.06
BDNF-208ENST00000418212 SH3RF3Q8TEJ3 882 aaPredicted RBP14.65□□□□□ -0.06
BDNF-208ENST00000418212 RABEP2Q9H5N1 569 aa14.65□□□□□ -0.06
BDNF-208ENST00000418212 STX10O60499 249 aa14.64□□□□□ -0.07
BDNF-208ENST00000418212 KRT19P08727 400 aa14.64□□□□□ -0.07
BDNF-208ENST00000418212 CDK8P49336 464 aa14.64□□□□□ -0.07
BDNF-208ENST00000418212 ERCC6LQ2NKX8 1250 aa14.64□□□□□ -0.07
BDNF-208ENST00000418212 XKR9Q5GH70 373 aa14.64□□□□□ -0.07
BDNF-208ENST00000418212 SPATA1Q5VX52 437 aa14.64□□□□□ -0.07
BDNF-208ENST00000418212 LRRC8AQ8IWT6 810 aa14.64□□□□□ -0.07
BDNF-208ENST00000418212 CACTINQ8WUQ7 758 aaKnown RBP14.64□□□□□ -0.07
BDNF-208ENST00000418212 RASAL2Q9UJF2 1139 aa14.64□□□□□ -0.07
BDNF-208ENST00000418212 COMMD10Q9Y6G5 202 aa14.64□□□□□ -0.07
BDNF-208ENST00000418212 ARHGEF40Q8TER5 1519 aa14.64□□□□□ -0.07
BDNF-208ENST00000418212 E9PCH4 1651 aa14.64□□□□□ -0.07
BDNF-208ENST00000418212 AFF2P51816 1311 aa14.64□□□□□ -0.07
BDNF-208ENST00000418212 ATP1A3P13637 1013 aa14.64□□□□□ -0.07
BDNF-208ENST00000418212 GPR162Q16538 588 aa14.64□□□□□ -0.07
BDNF-208ENST00000418212 UBE2SQ16763 222 aa14.64□□□□□ -0.07
BDNF-208ENST00000418212 CFAP58Q5T655 872 aa14.64□□□□□ -0.07
BDNF-208ENST00000418212 ARHGEF16Q5VV41 709 aa14.64□□□□□ -0.07
BDNF-208ENST00000418212 C8orf74Q6P047 294 aa14.64□□□□□ -0.07
BDNF-208ENST00000418212 ZNF215Q9UL58 517 aaPredicted RBP14.64□□□□□ -0.07
BDNF-208ENST00000418212 MEIS1O00470 390 aa14.64□□□□□ -0.07
BDNF-208ENST00000418212 VWA3BQ502W6 1294 aa14.64□□□□□ -0.07
BDNF-208ENST00000418212 NOX5Q96PH1 765 aa14.64□□□□□ -0.07
BDNF-208ENST00000418212 MYO1AQ9UBC5 1043 aa14.64□□□□□ -0.07
BDNF-208ENST00000418212 USTQ9Y2C2 406 aa14.64□□□□□ -0.07
BDNF-208ENST00000418212 NEDD4P46934 1319 aa14.64□□□□□ -0.07
BDNF-208ENST00000418212 FAM102BQ5T8I3 360 aa14.64□□□□□ -0.07
BDNF-208ENST00000418212 MRFAP1L1Q96HT8 127 aa14.64□□□□□ -0.07
BDNF-208ENST00000418212 KANSL2Q9H9L4 492 aa14.64□□□□□ -0.07
BDNF-208ENST00000418212 PANK4Q9NVE7 773 aa14.64□□□□□ -0.07
BDNF-208ENST00000418212 MRPL11Q9Y3B7 192 aaKnown RBP14.64□□□□□ -0.07
BDNF-208ENST00000418212 SFMBT2Q5VUG0 894 aa14.63□□□□□ -0.07
BDNF-208ENST00000418212 ATG9AQ7Z3C6 839 aa14.63□□□□□ -0.07
BDNF-208ENST00000418212 ZNF710Q8N1W2 664 aa14.63□□□□□ -0.07
BDNF-208ENST00000418212 MRRFQ96E11 262 aaKnown RBP14.63□□□□□ -0.07
BDNF-208ENST00000418212 CD209Q9NNX6 404 aa14.63□□□□□ -0.07
BDNF-208ENST00000418212 LARSQ9P2J5 1176 aaKnown RBP14.63□□□□□ -0.07
BDNF-208ENST00000418212 PCDHA4Q9UN74 947 aa14.63□□□□□ -0.07
BDNF-208ENST00000418212 NOD1Q9Y239 953 aa14.63□□□□□ -0.07
BDNF-208ENST00000418212 ADGRB3O60242 1522 aa14.63□□□□□ -0.07
BDNF-208ENST00000418212 ATP10DQ9P241 1426 aa14.63□□□□□ -0.07
BDNF-208ENST00000418212 CLGNO14967 610 aa14.63□□□□□ -0.07
BDNF-208ENST00000418212 CALCOCO2Q13137 446 aa14.63□□□□□ -0.07
BDNF-208ENST00000418212 ADAM9Q13443 819 aa14.63□□□□□ -0.07
BDNF-208ENST00000418212 CNPY4Q8N129 248 aa14.63□□□□□ -0.07
BDNF-208ENST00000418212 KIF2CQ99661 725 aa14.63□□□□□ -0.07
BDNF-208ENST00000418212 LSM14BQ9BX40 385 aaKnown RBP14.63□□□□□ -0.07
BDNF-208ENST00000418212 SAMSN1Q9NSI8 373 aaKnown RBP14.63□□□□□ -0.07
BDNF-208ENST00000418212 LONP1P36776 959 aaKnown RBP14.63□□□□□ -0.07
BDNF-208ENST00000418212 ETF1P62495 437 aaKnown RBP14.63□□□□□ -0.07
BDNF-208ENST00000418212 METTL13Q8N6R0 699 aa14.63□□□□□ -0.07
BDNF-208ENST00000418212 PPP1R14CQ8TAE6 165 aa14.63□□□□□ -0.07
BDNF-208ENST00000418212 CCDC97Q96F63 343 aaPredicted RBP14.63□□□□□ -0.07
BDNF-208ENST00000418212 SELENOSQ9BQE4 189 aa14.63□□□□□ -0.07
BDNF-208ENST00000418212 FERMT1Q9BQL6 677 aa14.63□□□□□ -0.07
BDNF-208ENST00000418212 IL25Q9H293 177 aa14.63□□□□□ -0.07
BDNF-208ENST00000418212 PPP6R2O75170 966 aa14.62□□□□□ -0.07
BDNF-208ENST00000418212 CASP14P31944 242 aa14.62□□□□□ -0.07
BDNF-208ENST00000418212 DNM2P50570 870 aa14.62□□□□□ -0.07
BDNF-208ENST00000418212 MAP3K9P80192 1104 aa14.62□□□□□ -0.07
BDNF-208ENST00000418212 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.62□□□□□ -0.07
BDNF-208ENST00000418212 UBLCP1Q8WVY7 318 aaPredicted RBP14.62□□□□□ -0.07
BDNF-208ENST00000418212 TDRD3Q9H7E2 651 aaKnown RBP14.62□□□□□ -0.07
BDNF-208ENST00000418212 MTUS1Q9ULD2 1270 aa14.62□□□□□ -0.07
BDNF-208ENST00000418212 ZDHHC9Q9Y397 364 aa14.62□□□□□ -0.07
BDNF-208ENST00000418212 COL15A1P39059 1388 aa14.62□□□□□ -0.07
BDNF-208ENST00000418212 DLATP10515 647 aaKnown RBP14.62□□□□□ -0.07
BDNF-208ENST00000418212 POLR2FP61218 127 aaKnown RBP14.62□□□□□ -0.07
BDNF-208ENST00000418212 TRIM6Q9C030 488 aaPredicted RBP14.62□□□□□ -0.07
BDNF-208ENST00000418212 POLD4Q9HCU8 107 aa14.62□□□□□ -0.07
BDNF-208ENST00000418212 CRB1P82279 1406 aa14.62□□□□□ -0.07
BDNF-208ENST00000418212 TNS3Q68CZ2 1445 aa14.62□□□□□ -0.07
BDNF-208ENST00000418212 HOXA13P31271 388 aaPredicted RBP14.62□□□□□ -0.07
BDNF-208ENST00000418212 HPDP32754 393 aaPredicted RBP14.62□□□□□ -0.07
BDNF-208ENST00000418212 ODR4Q5SWX8 454 aa14.62□□□□□ -0.07
BDNF-208ENST00000418212 STOX1Q6ZVD7 989 aa14.62□□□□□ -0.07
BDNF-208ENST00000418212 SULF1Q8IWU6 871 aa14.62□□□□□ -0.07
BDNF-208ENST00000418212 TRIML1Q8N9V2 468 aa14.62□□□□□ -0.07
BDNF-208ENST00000418212 GSDMAQ96QA5 445 aa14.62□□□□□ -0.07
BDNF-208ENST00000418212 MLXIPQ9HAP2 919 aa14.62□□□□□ -0.07
BDNF-208ENST00000418212 DCP1AQ9NPI6 582 aaPredicted RBP14.62□□□□□ -0.07
BDNF-208ENST00000418212 NCAPD2Q15021 1401 aa14.62□□□□□ -0.07
BDNF-208ENST00000418212 CEP152O94986 1710 aa14.61□□□□□ -0.07
BDNF-208ENST00000418212 DKC1O60832 514 aaKnown RBP eCLIP14.61□□□□□ -0.07
BDNF-208ENST00000418212 SLFN14P0C7P3 912 aa14.61□□□□□ -0.07
BDNF-208ENST00000418212 SF3A3Q12874 501 aaKnown RBP eCLIP14.61□□□□□ -0.07
BDNF-208ENST00000418212 TRIM28Q13263 835 aaKnown RBP14.61□□□□□ -0.07
BDNF-208ENST00000418212 ASPRV1Q53RT3 343 aa14.61□□□□□ -0.07
BDNF-208ENST00000418212 GALNT17Q6IS24 598 aa14.61□□□□□ -0.07
BDNF-208ENST00000418212 LARP4BQ92615 738 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms