RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 NUP133Q8WUM0 1156 aa12.92□□□□□ -0.34
TM9SF4-203ENST00000417389 TRERF1Q96PN7 1200 aa12.92□□□□□ -0.34
TM9SF4-203ENST00000417389 UBA5Q9GZZ9 404 aa12.92□□□□□ -0.34
TM9SF4-203ENST00000417389 ACAD9Q9H845 621 aa12.92□□□□□ -0.34
TM9SF4-203ENST00000417389 VAT1LQ9HCJ6 419 aa12.92□□□□□ -0.34
TM9SF4-203ENST00000417389 RNF146Q9NTX7 359 aa12.92□□□□□ -0.34
TM9SF4-203ENST00000417389 KIAA0100Q14667 2235 aaKnown RBP12.92□□□□□ -0.34
TM9SF4-203ENST00000417389 COL11A1P12107 1806 aaPredicted RBP12.91□□□□□ -0.34
TM9SF4-203ENST00000417389 CCDC69A6NI79 296 aa12.91□□□□□ -0.34
TM9SF4-203ENST00000417389 FGD1P98174 961 aa12.91□□□□□ -0.34
TM9SF4-203ENST00000417389 CACNB2Q08289 660 aaPredicted RBP12.91□□□□□ -0.34
TM9SF4-203ENST00000417389 NECTIN1Q15223 517 aa12.91□□□□□ -0.34
TM9SF4-203ENST00000417389 TKFCQ3LXA3 575 aa12.91□□□□□ -0.34
TM9SF4-203ENST00000417389 ANKS1AQ92625 1134 aa12.91□□□□□ -0.34
TM9SF4-203ENST00000417389 CPVLQ9H3G5 476 aa12.91□□□□□ -0.34
TM9SF4-203ENST00000417389 FLRT1Q9NZU1 646 aa12.91□□□□□ -0.34
TM9SF4-203ENST00000417389 PLXNB2O15031 1838 aa12.9□□□□□ -0.34
TM9SF4-203ENST00000417389 PARP14Q460N5 1801 aa12.9□□□□□ -0.34
TM9SF4-203ENST00000417389 CENPFP49454 3210 aa12.9□□□□□ -0.34
TM9SF4-203ENST00000417389 POTEB2H3BUK9 544 aa12.9□□□□□ -0.34
TM9SF4-203ENST00000417389 SGPL1O95470 568 aa12.9□□□□□ -0.34
TM9SF4-203ENST00000417389 MYCNP04198 464 aaPredicted RBP12.9□□□□□ -0.34
TM9SF4-203ENST00000417389 ICAM1P05362 532 aa12.9□□□□□ -0.34
TM9SF4-203ENST00000417389 HOXC6P09630 235 aa12.9□□□□□ -0.34
TM9SF4-203ENST00000417389 TAL1P17542 331 aaPredicted RBP12.9□□□□□ -0.34
TM9SF4-203ENST00000417389 CCND3P30281 292 aaPredicted RBP12.9□□□□□ -0.34
TM9SF4-203ENST00000417389 GJA8P48165 433 aa12.9□□□□□ -0.34
TM9SF4-203ENST00000417389 RGS19P49795 217 aa12.9□□□□□ -0.34
TM9SF4-203ENST00000417389 USH1GQ495M9 461 aa12.9□□□□□ -0.34
TM9SF4-203ENST00000417389 BTNL9Q6UXG8 535 aa12.9□□□□□ -0.34
TM9SF4-203ENST00000417389 NSMFQ6X4W1 530 aa12.9□□□□□ -0.34
TM9SF4-203ENST00000417389 MB21D2Q8IYB1 491 aaPredicted RBP12.9□□□□□ -0.34
TM9SF4-203ENST00000417389 RANBP17Q9H2T7 1088 aaKnown RBP12.9□□□□□ -0.34
TM9SF4-203ENST00000417389 SNHG28P0DPA3 235 aa12.89□□□□□ -0.35
TM9SF4-203ENST00000417389 KRT32Q14532 448 aa12.89□□□□□ -0.35
TM9SF4-203ENST00000417389 SEC23AQ15436 765 aa12.89□□□□□ -0.35
TM9SF4-203ENST00000417389 CDC37Q16543 378 aaPredicted RBP12.89□□□□□ -0.35
TM9SF4-203ENST00000417389 OLFML2BQ68BL8 750 aa12.89□□□□□ -0.35
TM9SF4-203ENST00000417389 ADGRF4Q8IZF3 695 aa12.89□□□□□ -0.35
TM9SF4-203ENST00000417389 MAML3Q96JK9 1138 aa12.89□□□□□ -0.35
TM9SF4-203ENST00000417389 NEK1Q96PY6 1258 aa12.89□□□□□ -0.35
TM9SF4-203ENST00000417389 LRRC2Q9BYS8 371 aa12.89□□□□□ -0.35
TM9SF4-203ENST00000417389 PNMA2Q9UL42 364 aa12.89□□□□□ -0.35
TM9SF4-203ENST00000417389 NAP1L2Q9ULW6 460 aaPredicted RBP12.89□□□□□ -0.35
TM9SF4-203ENST00000417389 CNPY2Q9Y2B0 182 aa12.89□□□□□ -0.35
TM9SF4-203ENST00000417389 GTF3C3Q9Y5Q9 886 aa12.89□□□□□ -0.35
TM9SF4-203ENST00000417389 ZNF536O15090 1300 aa12.88□□□□□ -0.35
TM9SF4-203ENST00000417389 PTPDC1A2A3K4 754 aa12.88□□□□□ -0.35
TM9SF4-203ENST00000417389 KLRF2D3W0D1 207 aa12.88□□□□□ -0.35
TM9SF4-203ENST00000417389 FARP2O94887 1054 aaPredicted RBP12.88□□□□□ -0.35
TM9SF4-203ENST00000417389 ANTXR2P58335 489 aa12.88□□□□□ -0.35
TM9SF4-203ENST00000417389 MUM1L1Q5H9M0 696 aa12.88□□□□□ -0.35
TM9SF4-203ENST00000417389 SYNE3Q6ZMZ3 975 aa12.88□□□□□ -0.35
TM9SF4-203ENST00000417389 HOMER1Q86YM7 354 aa12.88□□□□□ -0.35
TM9SF4-203ENST00000417389 STAG2Q8N3U4 1231 aa12.88□□□□□ -0.35
TM9SF4-203ENST00000417389 CTCFLQ8NI51 663 aaPredicted RBP12.88□□□□□ -0.35
TM9SF4-203ENST00000417389 PIBF1Q8WXW3 757 aa12.88□□□□□ -0.35
TM9SF4-203ENST00000417389 TMEM87BQ96K49 555 aa12.88□□□□□ -0.35
TM9SF4-203ENST00000417389 TINF2Q9BSI4 451 aa12.88□□□□□ -0.35
TM9SF4-203ENST00000417389 MYL10Q9BUA6 226 aa12.88□□□□□ -0.35
TM9SF4-203ENST00000417389 SENP2Q9HC62 589 aa12.88□□□□□ -0.35
TM9SF4-203ENST00000417389 PAK6Q9NQU5 681 aaPredicted RBP12.88□□□□□ -0.35
TM9SF4-203ENST00000417389 GPHNQ9NQX3 736 aaPredicted RBP12.88□□□□□ -0.35
TM9SF4-203ENST00000417389 PFASO15067 1338 aa12.88□□□□□ -0.35
TM9SF4-203ENST00000417389 CALML3P27482 149 aa12.87□□□□□ -0.35
TM9SF4-203ENST00000417389 ZNF792Q3KQV3 632 aa12.87□□□□□ -0.35
TM9SF4-203ENST00000417389 PRAMEF19Q5SWL8 479 aa12.87□□□□□ -0.35
TM9SF4-203ENST00000417389 MAP3K21Q5TCX8 1036 aa12.87□□□□□ -0.35
TM9SF4-203ENST00000417389 ANO1Q5XXA6 986 aa12.87□□□□□ -0.35
TM9SF4-203ENST00000417389 RAB11FIP4Q86YS3 637 aa12.87□□□□□ -0.35
TM9SF4-203ENST00000417389 CCDC144CPQ8IYA2 1237 aa12.87□□□□□ -0.35
TM9SF4-203ENST00000417389 ZNF654Q8IZM8 581 aa12.87□□□□□ -0.35
TM9SF4-203ENST00000417389 TMTC2Q8N394 836 aa12.87□□□□□ -0.35
TM9SF4-203ENST00000417389 IGDCC4Q8TDY8 1250 aa12.87□□□□□ -0.35
TM9SF4-203ENST00000417389 TCEANC2Q96MN5 208 aa12.87□□□□□ -0.35
TM9SF4-203ENST00000417389 JAKMIP1Q96N16 626 aaKnown RBP12.87□□□□□ -0.35
TM9SF4-203ENST00000417389 LY9Q9HBG7 655 aa12.87□□□□□ -0.35
TM9SF4-203ENST00000417389 A1CFQ9NQ94 594 aaKnown RBP12.87□□□□□ -0.35
TM9SF4-203ENST00000417389 ZHX1Q9UKY1 873 aaPredicted RBP12.87□□□□□ -0.35
TM9SF4-203ENST00000417389 DIS3Q9Y2L1 958 aaKnown RBP12.87□□□□□ -0.35
TM9SF4-203ENST00000417389 SLC12A7Q9Y666 1083 aa12.87□□□□□ -0.35
TM9SF4-203ENST00000417389 SH2B2O14492 632 aaPredicted RBP12.86□□□□□ -0.35
TM9SF4-203ENST00000417389 KIF5BP33176 963 aa12.86□□□□□ -0.35
TM9SF4-203ENST00000417389 CNTN2Q02246 1040 aa12.86□□□□□ -0.35
TM9SF4-203ENST00000417389 GRM4Q14833 912 aa12.86□□□□□ -0.35
TM9SF4-203ENST00000417389 FBXO11Q86XK2 927 aa12.86□□□□□ -0.35
TM9SF4-203ENST00000417389 RASEFQ8IZ41 740 aa12.86□□□□□ -0.35
TM9SF4-203ENST00000417389 SHISA4Q96DD7 197 aa12.86□□□□□ -0.35
TM9SF4-203ENST00000417389 DDX20Q9UHI6 824 aaKnown RBP12.86□□□□□ -0.35
TM9SF4-203ENST00000417389 MAD2L2Q9UI95 211 aa12.86□□□□□ -0.35
TM9SF4-203ENST00000417389 ZNF236Q9UL36 1845 aa12.85□□□□□ -0.35
TM9SF4-203ENST00000417389 NFIBO00712 420 aa12.85□□□□□ -0.35
TM9SF4-203ENST00000417389 MSCO60682 206 aa12.85□□□□□ -0.35
TM9SF4-203ENST00000417389 DDAH1O94760 285 aa12.85□□□□□ -0.35
TM9SF4-203ENST00000417389 HMGB1P09429 215 aaKnown RBP12.85□□□□□ -0.35
TM9SF4-203ENST00000417389 CYBAP13498 195 aa12.85□□□□□ -0.35
TM9SF4-203ENST00000417389 RXRAP19793 462 aa12.85□□□□□ -0.35
TM9SF4-203ENST00000417389 BAATQ14032 418 aaPredicted RBP12.85□□□□□ -0.35
TM9SF4-203ENST00000417389 QRICH1Q2TAL8 776 aa12.85□□□□□ -0.35
TM9SF4-203ENST00000417389 ADCK5Q3MIX3 580 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms