RNA–Protein interactions for RNA: ENST00000416585.1

SNX30-202, Transcript of sorting nexin family member 30, humanhuman

TSL 3

Gene SNX30, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-202ENST00000416585 TRIM43BA6NCK2 446 aa13.46□□□□□ -0.25
SNX30-202ENST00000416585 POTEB2H3BUK9 544 aa13.46□□□□□ -0.25
SNX30-202ENST00000416585 TLR3O15455 904 aaKnown RBP13.46□□□□□ -0.25
SNX30-202ENST00000416585 ADAMTS4O75173 837 aa13.46□□□□□ -0.25
SNX30-202ENST00000416585 SMAD3P84022 425 aaKnown RBP13.46□□□□□ -0.25
SNX30-202ENST00000416585 C9orf50Q5SZB4 431 aa13.46□□□□□ -0.25
SNX30-202ENST00000416585 NOL8Q76FK4 1167 aaKnown RBP13.46□□□□□ -0.25
SNX30-202ENST00000416585 TRIM43Q96BQ3 446 aaPredicted RBP13.46□□□□□ -0.25
SNX30-202ENST00000416585 SEC62Q99442 399 aaKnown RBP13.46□□□□□ -0.25
SNX30-202ENST00000416585 TOMM22Q9NS69 142 aa13.46□□□□□ -0.25
SNX30-202ENST00000416585 DNAH12Q6ZR08 3092 aa13.46□□□□□ -0.25
SNX30-202ENST00000416585 KIAA0355O15063 1070 aa13.45□□□□□ -0.26
SNX30-202ENST00000416585 SNAI1O95863 264 aaPredicted RBP13.45□□□□□ -0.26
SNX30-202ENST00000416585 KCNA10Q16322 511 aa13.45□□□□□ -0.26
SNX30-202ENST00000416585 TKFCQ3LXA3 575 aa13.45□□□□□ -0.26
SNX30-202ENST00000416585 CCDC144BQ3MJ40 725 aa13.45□□□□□ -0.26
SNX30-202ENST00000416585 ZMYM1Q5SVZ6 1142 aa13.45□□□□□ -0.26
SNX30-202ENST00000416585 ARMCX2Q7L311 632 aa13.45□□□□□ -0.26
SNX30-202ENST00000416585 PI4K2BQ8TCG2 481 aa13.45□□□□□ -0.26
SNX30-202ENST00000416585 STAG1Q8WVM7 1258 aa13.45□□□□□ -0.26
SNX30-202ENST00000416585 CHMP4CQ96CF2 233 aa13.45□□□□□ -0.26
SNX30-202ENST00000416585 GMCL1Q96IK5 515 aa13.45□□□□□ -0.26
SNX30-202ENST00000416585 GUCD1Q96NT3 240 aa13.45□□□□□ -0.26
SNX30-202ENST00000416585 RNF146Q9NTX7 359 aa13.45□□□□□ -0.26
SNX30-202ENST00000416585 MTMR7Q9Y216 660 aa13.45□□□□□ -0.26
SNX30-202ENST00000416585 A0A0U1RQG5 324 aaPredicted RBP13.44□□□□□ -0.26
SNX30-202ENST00000416585 ASB14A6NK59 587 aa13.44□□□□□ -0.26
SNX30-202ENST00000416585 RANBP6O60518 1105 aaKnown RBP13.44□□□□□ -0.26
SNX30-202ENST00000416585 ASGR1P07306 291 aa13.44□□□□□ -0.26
SNX30-202ENST00000416585 ALAS1P13196 640 aa13.44□□□□□ -0.26
SNX30-202ENST00000416585 MCCP23508 829 aa13.44□□□□□ -0.26
SNX30-202ENST00000416585 CST5P28325 142 aaPredicted RBP13.44□□□□□ -0.26
SNX30-202ENST00000416585 CCDC96Q2M329 555 aa13.44□□□□□ -0.26
SNX30-202ENST00000416585 GNASQ5JWF2 1037 aa13.44□□□□□ -0.26
SNX30-202ENST00000416585 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.44□□□□□ -0.26
SNX30-202ENST00000416585 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.44□□□□□ -0.26
SNX30-202ENST00000416585 TOX2Q96NM4 488 aa13.44□□□□□ -0.26
SNX30-202ENST00000416585 ELP1O95163 1332 aa13.43□□□□□ -0.26
SNX30-202ENST00000416585 ZEB2O60315 1214 aa13.43□□□□□ -0.26
SNX30-202ENST00000416585 CTDSPL2Q05D32 466 aa13.43□□□□□ -0.26
SNX30-202ENST00000416585 ANKRD45Q5TZF3 282 aa13.43□□□□□ -0.26
SNX30-202ENST00000416585 ANKRD33Q7Z3H0 272 aa13.43□□□□□ -0.26
SNX30-202ENST00000416585 CCDC144CPQ8IYA2 1237 aa13.43□□□□□ -0.26
SNX30-202ENST00000416585 KLHDC9Q8NEP7 349 aa13.43□□□□□ -0.26
SNX30-202ENST00000416585 EVI5LQ96CN4 794 aa13.43□□□□□ -0.26
SNX30-202ENST00000416585 TRERF1Q96PN7 1200 aa13.43□□□□□ -0.26
SNX30-202ENST00000416585 AP5M1Q9H0R1 490 aa13.43□□□□□ -0.26
SNX30-202ENST00000416585 LAMA3Q16787 3333 aa13.43□□□□□ -0.26
SNX30-202ENST00000416585 TMEM265A0A087WTH1 108 aa13.42□□□□□ -0.26
SNX30-202ENST00000416585 FOSL2P15408 326 aa13.42□□□□□ -0.26
SNX30-202ENST00000416585 GJA9P57773 515 aa13.42□□□□□ -0.26
SNX30-202ENST00000416585 TNFAIP2Q03169 654 aa13.42□□□□□ -0.26
SNX30-202ENST00000416585 FAAP100Q0VG06 881 aa13.42□□□□□ -0.26
SNX30-202ENST00000416585 PPIGQ13427 754 aaKnown RBP eCLIP13.42□□□□□ -0.26
SNX30-202ENST00000416585 RRP12Q5JTH9 1297 aaKnown RBP13.42□□□□□ -0.26
SNX30-202ENST00000416585 RCSD1Q6JBY9 416 aa13.42□□□□□ -0.26
SNX30-202ENST00000416585 CCDC129Q6ZRS4 1044 aa13.42□□□□□ -0.26
SNX30-202ENST00000416585 KCTD1Q719H9 257 aa13.42□□□□□ -0.26
SNX30-202ENST00000416585 TMEM199Q8N511 208 aa13.42□□□□□ -0.26
SNX30-202ENST00000416585 CDX2Q99626 313 aaPredicted RBP13.42□□□□□ -0.26
SNX30-202ENST00000416585 UPF3AQ9H1J1 476 aaKnown RBP13.42□□□□□ -0.26
SNX30-202ENST00000416585 SEMA6BQ9H3T3 888 aa13.42□□□□□ -0.26
SNX30-202ENST00000416585 A1CFQ9NQ94 594 aaKnown RBP13.42□□□□□ -0.26
SNX30-202ENST00000416585 CCPG1Q9ULG6 757 aa13.42□□□□□ -0.26
SNX30-202ENST00000416585 PCDHB15Q9Y5E8 787 aa13.42□□□□□ -0.26
SNX30-202ENST00000416585 KIAA1217Q5T5P2 1943 aa13.42□□□□□ -0.26
SNX30-202ENST00000416585 MYO9BQ13459 2157 aa13.42□□□□□ -0.26
SNX30-202ENST00000416585 MYH7BA7E2Y1 1941 aa13.41□□□□□ -0.26
SNX30-202ENST00000416585 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.41□□□□□ -0.26
SNX30-202ENST00000416585 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.41□□□□□ -0.26
SNX30-202ENST00000416585 MYADML2A6NDP7 307 aa13.41□□□□□ -0.26
SNX30-202ENST00000416585 PLA2G6O60733 806 aa13.41□□□□□ -0.26
SNX30-202ENST00000416585 TIMP1P01033 207 aa13.41□□□□□ -0.26
SNX30-202ENST00000416585 NSMFQ6X4W1 530 aa13.41□□□□□ -0.26
SNX30-202ENST00000416585 TLK2Q86UE8 772 aa13.41□□□□□ -0.26
SNX30-202ENST00000416585 MAFAQ8NHW3 353 aaPredicted RBP13.41□□□□□ -0.26
SNX30-202ENST00000416585 OTUD7AQ8TE49 926 aaPredicted RBP13.41□□□□□ -0.26
SNX30-202ENST00000416585 DCAF4Q8WV16 495 aa13.41□□□□□ -0.26
SNX30-202ENST00000416585 AGBL1Q96MI9 1066 aa13.41□□□□□ -0.26
SNX30-202ENST00000416585 MPHOSPH6Q99547 160 aaKnown RBP13.41□□□□□ -0.26
SNX30-202ENST00000416585 HELLSQ9NRZ9 838 aa13.41□□□□□ -0.26
SNX30-202ENST00000416585 ARVCFO00192 962 aa13.4□□□□□ -0.26
SNX30-202ENST00000416585 CABYRO75952 493 aa13.4□□□□□ -0.26
SNX30-202ENST00000416585 ITGB8P26012 769 aa13.4□□□□□ -0.26
SNX30-202ENST00000416585 RRP1P56182 461 aaKnown RBP13.4□□□□□ -0.26
SNX30-202ENST00000416585 CNTN2Q02246 1040 aa13.4□□□□□ -0.26
SNX30-202ENST00000416585 MFSD5Q6N075 450 aa13.4□□□□□ -0.26
SNX30-202ENST00000416585 FAM133AQ8N9E0 248 aa13.4□□□□□ -0.26
SNX30-202ENST00000416585 MYLIPQ8WY64 445 aa13.4□□□□□ -0.26
SNX30-202ENST00000416585 PPP1R12CQ9BZL4 782 aa13.4□□□□□ -0.26
SNX30-202ENST00000416585 MTIF3Q9H2K0 278 aaKnown RBP13.4□□□□□ -0.26
SNX30-202ENST00000416585 ADD3Q9UEY8 706 aaKnown RBP13.4□□□□□ -0.26
SNX30-202ENST00000416585 PRR12Q9ULL5 1215 aa13.4□□□□□ -0.26
SNX30-202ENST00000416585 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.4□□□□□ -0.26
SNX30-202ENST00000416585 COL6A3P12111 3177 aa13.39□□□□□ -0.27
SNX30-202ENST00000416585 TRIM6-TRIM34B2RNG4 842 aa13.39□□□□□ -0.27
SNX30-202ENST00000416585 MFAP1P55081 439 aaKnown RBP13.39□□□□□ -0.27
SNX30-202ENST00000416585 BEX3Q00994 111 aa13.39□□□□□ -0.27
SNX30-202ENST00000416585 CCSAPQ6IQ19 270 aaPredicted RBP13.39□□□□□ -0.27
SNX30-202ENST00000416585 PSRC1Q6PGN9 363 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms