RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 CCDC174Q6PII3 467 aa15.79■□□□□ 0.12
CTHRC1-202ENST00000415886 ZNF365Q70YC5 407 aa15.79■□□□□ 0.12
CTHRC1-202ENST00000415886 ZNF467Q7Z7K2 595 aaPredicted RBP15.79■□□□□ 0.12
CTHRC1-202ENST00000415886 FAM126BQ8IXS8 530 aa15.79■□□□□ 0.12
CTHRC1-202ENST00000415886 TMEM199Q8N511 208 aa15.79■□□□□ 0.12
CTHRC1-202ENST00000415886 PRPF38AQ8NAV1 312 aaKnown RBP15.79■□□□□ 0.12
CTHRC1-202ENST00000415886 PCSK9Q8NBP7 692 aaKnown RBP15.79■□□□□ 0.12
CTHRC1-202ENST00000415886 UPF3AQ9H1J1 476 aaKnown RBP15.79■□□□□ 0.12
CTHRC1-202ENST00000415886 ATP2A1O14983 1001 aa15.78■□□□□ 0.12
CTHRC1-202ENST00000415886 ERC2O15083 957 aa15.78■□□□□ 0.12
CTHRC1-202ENST00000415886 GJA9P57773 515 aa15.78■□□□□ 0.12
CTHRC1-202ENST00000415886 ADGRE1Q14246 886 aa15.78■□□□□ 0.12
CTHRC1-202ENST00000415886 GNASQ5JWF2 1037 aa15.78■□□□□ 0.12
CTHRC1-202ENST00000415886 PSRC1Q6PGN9 363 aaPredicted RBP15.78■□□□□ 0.12
CTHRC1-202ENST00000415886 ARMCX2Q7L311 632 aa15.78■□□□□ 0.12
CTHRC1-202ENST00000415886 ANKRD35Q8N283 1001 aa15.78■□□□□ 0.12
CTHRC1-202ENST00000415886 KIFC2Q96AC6 838 aa15.78■□□□□ 0.12
CTHRC1-202ENST00000415886 ABHD16BQ9H3Z7 469 aa15.78■□□□□ 0.12
CTHRC1-202ENST00000415886 SPC25Q9HBM1 224 aa15.78■□□□□ 0.12
CTHRC1-202ENST00000415886 NYAP2Q9P242 653 aa15.78■□□□□ 0.12
CTHRC1-202ENST00000415886 CTDP1Q9Y5B0 961 aaPredicted RBP15.78■□□□□ 0.12
CTHRC1-202ENST00000415886 MCM3APO60318 1980 aa15.77■□□□□ 0.12
CTHRC1-202ENST00000415886 CTAGE5O15320 804 aa15.77■□□□□ 0.12
CTHRC1-202ENST00000415886 TLR3O15455 904 aaKnown RBP15.77■□□□□ 0.12
CTHRC1-202ENST00000415886 ZBED4O75132 1171 aa15.77■□□□□ 0.12
CTHRC1-202ENST00000415886 CYP2C18P33260 490 aa15.77■□□□□ 0.12
CTHRC1-202ENST00000415886 BEX3Q00994 111 aa15.77■□□□□ 0.12
CTHRC1-202ENST00000415886 AKNAD1Q5T1N1 836 aa15.77■□□□□ 0.12
CTHRC1-202ENST00000415886 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.77■□□□□ 0.12
CTHRC1-202ENST00000415886 CCDC144CPQ8IYA2 1237 aa15.77■□□□□ 0.12
CTHRC1-202ENST00000415886 ATXN2LQ8WWM7 1075 aaKnown RBP15.77■□□□□ 0.12
CTHRC1-202ENST00000415886 KATNBL1Q9H079 304 aa15.77■□□□□ 0.12
CTHRC1-202ENST00000415886 RWDD1Q9H446 243 aaPredicted RBP15.77■□□□□ 0.12
CTHRC1-202ENST00000415886 MKNK2Q9HBH9 465 aa15.77■□□□□ 0.12
CTHRC1-202ENST00000415886 THEGQ9P2T0 379 aa15.77■□□□□ 0.12
CTHRC1-202ENST00000415886 CLIP2Q9UDT6 1046 aa15.77■□□□□ 0.12
CTHRC1-202ENST00000415886 RAPGEFL1Q9UHV5 662 aa15.77■□□□□ 0.12
CTHRC1-202ENST00000415886 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.76■□□□□ 0.11
CTHRC1-202ENST00000415886 MINDY4BA8MYZ0 360 aa15.76■□□□□ 0.11
CTHRC1-202ENST00000415886 CD4P01730 458 aa15.76■□□□□ 0.11
CTHRC1-202ENST00000415886 CCDC85BQ15834 202 aaPredicted RBP15.76■□□□□ 0.11
CTHRC1-202ENST00000415886 SBK1Q52WX2 424 aa15.76■□□□□ 0.11
CTHRC1-202ENST00000415886 ASB2Q96Q27 587 aa15.76■□□□□ 0.11
CTHRC1-202ENST00000415886 NKX2-4Q9H2Z4 354 aa15.76■□□□□ 0.11
CTHRC1-202ENST00000415886 SLC38A10Q9HBR0 1119 aa15.76■□□□□ 0.11
CTHRC1-202ENST00000415886 HOMER2Q9NSB8 354 aa15.76■□□□□ 0.11
CTHRC1-202ENST00000415886 CXXC1Q9P0U4 656 aaPredicted RBP15.76■□□□□ 0.11
CTHRC1-202ENST00000415886 ASTN1O14525 1302 aa15.75■□□□□ 0.11
CTHRC1-202ENST00000415886 UMODL1Q5DID0 1318 aa15.75■□□□□ 0.11
CTHRC1-202ENST00000415886 MYH4Q9Y623 1939 aa15.75■□□□□ 0.11
CTHRC1-202ENST00000415886 IGKV6D-41A0A0C4DH26 115 aa15.75■□□□□ 0.11
CTHRC1-202ENST00000415886 GSG1L2A8MUP6 293 aa15.75■□□□□ 0.11
CTHRC1-202ENST00000415886 IGFBP4P22692 258 aa15.75■□□□□ 0.11
CTHRC1-202ENST00000415886 CNTN2Q02246 1040 aa15.75■□□□□ 0.11
CTHRC1-202ENST00000415886 RAB30Q15771 203 aa15.75■□□□□ 0.11
CTHRC1-202ENST00000415886 LRRC47Q8N1G4 583 aaKnown RBP15.75■□□□□ 0.11
CTHRC1-202ENST00000415886 CHST13Q8NET6 341 aa15.75■□□□□ 0.11
CTHRC1-202ENST00000415886 ADAMTS19Q8TE59 1207 aa15.75■□□□□ 0.11
CTHRC1-202ENST00000415886 HERVK_113Q902F9 699 aa15.75■□□□□ 0.11
CTHRC1-202ENST00000415886 STRBPQ96SI9 672 aaKnown RBP15.75■□□□□ 0.11
CTHRC1-202ENST00000415886 IL23AQ9NPF7 189 aa15.75■□□□□ 0.11
CTHRC1-202ENST00000415886 FBXO40Q9UH90 709 aa15.75■□□□□ 0.11
CTHRC1-202ENST00000415886 MSRAQ9UJ68 235 aa15.75■□□□□ 0.11
CTHRC1-202ENST00000415886 YBX2Q9Y2T7 364 aaKnown RBP15.75■□□□□ 0.11
CTHRC1-202ENST00000415886 TTC41PQ6P2S7 1318 aa15.74■□□□□ 0.11
CTHRC1-202ENST00000415886 GBF1Q92538 1859 aa15.74■□□□□ 0.11
CTHRC1-202ENST00000415886 PRDM1O75626 825 aa15.74■□□□□ 0.11
CTHRC1-202ENST00000415886 PTGS1P23219 599 aa15.74■□□□□ 0.11
CTHRC1-202ENST00000415886 HDAC1Q13547 482 aaPredicted RBP15.74■□□□□ 0.11
CTHRC1-202ENST00000415886 CXCL17Q6UXB2 119 aa15.74■□□□□ 0.11
CTHRC1-202ENST00000415886 KBTBD3Q8NAB2 608 aa15.74■□□□□ 0.11
CTHRC1-202ENST00000415886 CEP95Q96GE4 821 aa15.74■□□□□ 0.11
CTHRC1-202ENST00000415886 HIPK3Q9H422 1215 aa15.74■□□□□ 0.11
CTHRC1-202ENST00000415886 EPB41L4AQ9HCS5 686 aaPredicted RBP15.74■□□□□ 0.11
CTHRC1-202ENST00000415886 FEM1BQ9UK73 627 aa15.74■□□□□ 0.11
CTHRC1-202ENST00000415886 SUPT16HQ9Y5B9 1047 aaKnown RBP15.74■□□□□ 0.11
CTHRC1-202ENST00000415886 LRRC37A2A6NM11 1700 aa15.74■□□□□ 0.11
CTHRC1-202ENST00000415886 ZFYP08048 801 aaPredicted RBP15.73■□□□□ 0.11
CTHRC1-202ENST00000415886 OAZ1P54368 228 aa15.73■□□□□ 0.11
CTHRC1-202ENST00000415886 NKX3-2P78367 333 aa15.73■□□□□ 0.11
CTHRC1-202ENST00000415886 MRPS5P82675 430 aaKnown RBP15.73■□□□□ 0.11
CTHRC1-202ENST00000415886 TNFAIP2Q03169 654 aa15.73■□□□□ 0.11
CTHRC1-202ENST00000415886 TSHZ3Q63HK5 1081 aa15.73■□□□□ 0.11
CTHRC1-202ENST00000415886 NOL8Q76FK4 1167 aaKnown RBP15.73■□□□□ 0.11
CTHRC1-202ENST00000415886 OTOP2Q7RTS6 562 aa15.73■□□□□ 0.11
CTHRC1-202ENST00000415886 SLC43A3Q8NBI5 491 aa15.73■□□□□ 0.11
CTHRC1-202ENST00000415886 DDX49Q9Y6V7 483 aaKnown RBP15.73■□□□□ 0.11
CTHRC1-202ENST00000415886 RNF113AO15541 343 aaKnown RBP15.72■□□□□ 0.11
CTHRC1-202ENST00000415886 FGBP02675 491 aa15.72■□□□□ 0.11
CTHRC1-202ENST00000415886 MX1P20591 662 aa15.72■□□□□ 0.11
CTHRC1-202ENST00000415886 CCL23P55773 120 aa15.72■□□□□ 0.11
CTHRC1-202ENST00000415886 GIMAP6Q6P9H5 292 aa15.72■□□□□ 0.11
CTHRC1-202ENST00000415886 TLK2Q86UE8 772 aa15.72■□□□□ 0.11
CTHRC1-202ENST00000415886 FAM133AQ8N9E0 248 aa15.72■□□□□ 0.11
CTHRC1-202ENST00000415886 OSBP2Q969R2 916 aa15.72■□□□□ 0.11
CTHRC1-202ENST00000415886 MKL1Q969V6 931 aa15.72■□□□□ 0.11
CTHRC1-202ENST00000415886 UHRF1Q96T88 793 aaPredicted RBP15.72■□□□□ 0.11
CTHRC1-202ENST00000415886 MTIF3Q9H2K0 278 aaKnown RBP15.72■□□□□ 0.11
CTHRC1-202ENST00000415886 ACAD9Q9H845 621 aa15.72■□□□□ 0.11
CTHRC1-202ENST00000415886 SLC28A3Q9HAS3 691 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms