RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 TRIB2Q92519 343 aa11.39□□□□□ -0.59
LINC01090-201ENST00000415357 NUDT12Q9BQG2 462 aa11.39□□□□□ -0.59
LINC01090-201ENST00000415357 MOV10L1Q9BXT6 1211 aaKnown RBP11.39□□□□□ -0.59
LINC01090-201ENST00000415357 RNF208Q9H0X6 261 aa11.39□□□□□ -0.59
LINC01090-201ENST00000415357 IL25Q9H293 177 aa11.39□□□□□ -0.59
LINC01090-201ENST00000415357 MTMR4Q9NYA4 1195 aa11.39□□□□□ -0.59
LINC01090-201ENST00000415357 HOXC10Q9NYD6 342 aa11.39□□□□□ -0.59
LINC01090-201ENST00000415357 TSPY2A6NKD2 308 aa11.38□□□□□ -0.59
LINC01090-201ENST00000415357 RANBP6O60518 1105 aaKnown RBP11.38□□□□□ -0.59
LINC01090-201ENST00000415357 NMT2O60551 498 aa11.38□□□□□ -0.59
LINC01090-201ENST00000415357 CCNA1P78396 465 aa11.38□□□□□ -0.59
LINC01090-201ENST00000415357 PLS1Q14651 629 aa11.38□□□□□ -0.59
LINC01090-201ENST00000415357 CCL14Q16627 93 aa11.38□□□□□ -0.59
LINC01090-201ENST00000415357 RRP12Q5JTH9 1297 aaKnown RBP11.38□□□□□ -0.59
LINC01090-201ENST00000415357 MORN1Q5T089 497 aa11.38□□□□□ -0.59
LINC01090-201ENST00000415357 RASGRP2Q7LDG7 609 aa11.38□□□□□ -0.59
LINC01090-201ENST00000415357 LAPTM4BQ86VI4 370 aa11.38□□□□□ -0.59
LINC01090-201ENST00000415357 SKAP1Q86WV1 359 aa11.38□□□□□ -0.59
LINC01090-201ENST00000415357 TICAM2Q86XR7 235 aa11.38□□□□□ -0.59
LINC01090-201ENST00000415357 NKX2-3Q8TAU0 364 aa11.38□□□□□ -0.59
LINC01090-201ENST00000415357 SOCS4Q8WXH5 440 aa11.38□□□□□ -0.59
LINC01090-201ENST00000415357 USP6NLQ92738 828 aa11.38□□□□□ -0.59
LINC01090-201ENST00000415357 SPATC1LQ9H0A9 340 aa11.38□□□□□ -0.59
LINC01090-201ENST00000415357 TOMM22Q9NS69 142 aa11.38□□□□□ -0.59
LINC01090-201ENST00000415357 ANAPC4Q9UJX5 808 aa11.38□□□□□ -0.59
LINC01090-201ENST00000415357 ZMYM6O95789 1325 aa11.37□□□□□ -0.59
LINC01090-201ENST00000415357 COL11A1P12107 1806 aaPredicted RBP11.37□□□□□ -0.59
LINC01090-201ENST00000415357 TTLL1O95922 423 aa11.37□□□□□ -0.59
LINC01090-201ENST00000415357 HMGCRP04035 888 aa11.37□□□□□ -0.59
LINC01090-201ENST00000415357 ERCC3P19447 782 aa11.37□□□□□ -0.59
LINC01090-201ENST00000415357 RGS2P41220 211 aa11.37□□□□□ -0.59
LINC01090-201ENST00000415357 TMEM132BQ14DG7 1078 aa11.37□□□□□ -0.59
LINC01090-201ENST00000415357 TBC1D10CQ8IV04 446 aa11.37□□□□□ -0.59
LINC01090-201ENST00000415357 APBA2Q99767 749 aa11.37□□□□□ -0.59
LINC01090-201ENST00000415357 IL17RBQ9NRM6 502 aa11.37□□□□□ -0.59
LINC01090-201ENST00000415357 PPP1R9AQ9ULJ8 1098 aa11.37□□□□□ -0.59
LINC01090-201ENST00000415357 STX8Q9UNK0 236 aa11.37□□□□□ -0.59
LINC01090-201ENST00000415357 HIP1O00291 1037 aa11.36□□□□□ -0.59
LINC01090-201ENST00000415357 VWA5AO00534 786 aa11.36□□□□□ -0.59
LINC01090-201ENST00000415357 ORC4O43929 436 aa11.36□□□□□ -0.59
LINC01090-201ENST00000415357 GJB1P08034 283 aa11.36□□□□□ -0.59
LINC01090-201ENST00000415357 ZKSCAN1P17029 563 aaPredicted RBP11.36□□□□□ -0.59
LINC01090-201ENST00000415357 GJA8P48165 433 aa11.36□□□□□ -0.59
LINC01090-201ENST00000415357 MFAP1P55081 439 aaKnown RBP11.36□□□□□ -0.59
LINC01090-201ENST00000415357 GRB14Q14449 540 aa11.36□□□□□ -0.59
LINC01090-201ENST00000415357 SLFN13Q68D06 897 aa11.36□□□□□ -0.59
LINC01090-201ENST00000415357 NCAPG2Q86XI2 1143 aa11.36□□□□□ -0.59
LINC01090-201ENST00000415357 MB21D1Q8N884 522 aa11.36□□□□□ -0.59
LINC01090-201ENST00000415357 REPS2Q8NFH8 660 aa11.36□□□□□ -0.59
LINC01090-201ENST00000415357 NPLOC4Q8TAT6 608 aa11.36□□□□□ -0.59
LINC01090-201ENST00000415357 U2AF1L4Q8WU68 220 aaKnown RBP11.36□□□□□ -0.59
LINC01090-201ENST00000415357 MKL1Q969V6 931 aa11.36□□□□□ -0.59
LINC01090-201ENST00000415357 KCTD12Q96CX2 325 aaKnown RBP11.36□□□□□ -0.59
LINC01090-201ENST00000415357 ZFRQ96KR1 1074 aaKnown RBP11.36□□□□□ -0.59
LINC01090-201ENST00000415357 DEFB118Q96PH6 123 aa11.36□□□□□ -0.59
LINC01090-201ENST00000415357 SLF1Q9BQI6 1058 aa11.36□□□□□ -0.59
LINC01090-201ENST00000415357 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.36□□□□□ -0.59
LINC01090-201ENST00000415357 ISY1Q9ULR0 285 aaKnown RBP11.36□□□□□ -0.59
LINC01090-201ENST00000415357 MTMR7Q9Y216 660 aa11.36□□□□□ -0.59
LINC01090-201ENST00000415357 IVNS1ABPQ9Y6Y0 642 aa11.36□□□□□ -0.59
LINC01090-201ENST00000415357 NEDD4P46934 1319 aa11.35□□□□□ -0.59
LINC01090-201ENST00000415357 LAMA4Q16363 1823 aa11.35□□□□□ -0.59
LINC01090-201ENST00000415357 SLC15A5A6NIM6 579 aa11.35□□□□□ -0.59
LINC01090-201ENST00000415357 OATP04181 439 aa11.35□□□□□ -0.59
LINC01090-201ENST00000415357 FGRP09769 529 aa11.35□□□□□ -0.59
LINC01090-201ENST00000415357 XRCC5P13010 732 aaKnown RBP11.35□□□□□ -0.59
LINC01090-201ENST00000415357 METTL3Q86U44 580 aaKnown RBP11.35□□□□□ -0.59
LINC01090-201ENST00000415357 GMCL1P1Q8NEA9 526 aa11.35□□□□□ -0.59
LINC01090-201ENST00000415357 KIFC2Q96AC6 838 aa11.35□□□□□ -0.59
LINC01090-201ENST00000415357 PAK6Q9NQU5 681 aaPredicted RBP11.35□□□□□ -0.59
LINC01090-201ENST00000415357 FLRT1Q9NZU1 646 aa11.35□□□□□ -0.59
LINC01090-201ENST00000415357 ZNF214Q9UL59 606 aaPredicted RBP11.35□□□□□ -0.59
LINC01090-201ENST00000415357 ADAMTS5Q9UNA0 930 aa11.35□□□□□ -0.59
LINC01090-201ENST00000415357 ZNF236Q9UL36 1845 aa11.35□□□□□ -0.59
LINC01090-201ENST00000415357 SGPL1O95470 568 aa11.34□□□□□ -0.59
LINC01090-201ENST00000415357 BMP3P12645 472 aa11.34□□□□□ -0.59
LINC01090-201ENST00000415357 ADORA2AP29274 412 aa11.34□□□□□ -0.59
LINC01090-201ENST00000415357 CACNB2Q08289 660 aaPredicted RBP11.34□□□□□ -0.59
LINC01090-201ENST00000415357 AKNAD1Q5T1N1 836 aa11.34□□□□□ -0.59
LINC01090-201ENST00000415357 MAP3K21Q5TCX8 1036 aa11.34□□□□□ -0.59
LINC01090-201ENST00000415357 SHCBP1Q8NEM2 672 aa11.34□□□□□ -0.59
LINC01090-201ENST00000415357 STAG1Q8WVM7 1258 aa11.34□□□□□ -0.59
LINC01090-201ENST00000415357 NLRP7Q8WX94 980 aa11.34□□□□□ -0.59
LINC01090-201ENST00000415357 WNT2BQ93097 391 aa11.34□□□□□ -0.59
LINC01090-201ENST00000415357 RNF166Q96A37 237 aaPredicted RBP11.34□□□□□ -0.59
LINC01090-201ENST00000415357 SLC24A3Q9HC58 644 aa11.34□□□□□ -0.59
LINC01090-201ENST00000415357 TMEM232C9JQI7 657 aa11.33□□□□□ -0.6
LINC01090-201ENST00000415357 ZNF213O14771 459 aa11.33□□□□□ -0.6
LINC01090-201ENST00000415357 COBLO75128 1261 aa11.33□□□□□ -0.6
LINC01090-201ENST00000415357 MCCP23508 829 aa11.33□□□□□ -0.6
LINC01090-201ENST00000415357 CHMLP26374 656 aa11.33□□□□□ -0.6
LINC01090-201ENST00000415357 CCND3P30281 292 aaPredicted RBP11.33□□□□□ -0.6
LINC01090-201ENST00000415357 STAT3P40763 770 aa11.33□□□□□ -0.6
LINC01090-201ENST00000415357 SLC4A3P48751 1232 aa11.33□□□□□ -0.6
LINC01090-201ENST00000415357 MMRN1Q13201 1228 aa11.33□□□□□ -0.6
LINC01090-201ENST00000415357 SNRNP48Q6IEG0 339 aaKnown RBP11.33□□□□□ -0.6
LINC01090-201ENST00000415357 MFSD6Q6ZSS7 791 aa11.33□□□□□ -0.6
LINC01090-201ENST00000415357 KCTD1Q719H9 257 aa11.33□□□□□ -0.6
LINC01090-201ENST00000415357 DPP9Q86TI2 863 aa11.33□□□□□ -0.6
LINC01090-201ENST00000415357 RIOX2Q8IUF8 465 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms