RNA–Protein interactions for RNA: ENST00000413758.1

COL6A2-205, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-205ENST00000413758 ZNF213O14771 459 aa19.82■□□□□ 0.76
COL6A2-205ENST00000413758 FGRP09769 529 aa19.82■□□□□ 0.76
COL6A2-205ENST00000413758 TOP1P11387 765 aaKnown RBP19.82■□□□□ 0.76
COL6A2-205ENST00000413758 AKNAD1Q5T1N1 836 aa19.82■□□□□ 0.76
COL6A2-205ENST00000413758 RASGRP2Q7LDG7 609 aa19.82■□□□□ 0.76
COL6A2-205ENST00000413758 RNF180Q86T96 592 aa19.82■□□□□ 0.76
COL6A2-205ENST00000413758 MSL3Q8N5Y2 521 aaKnown RBP19.82■□□□□ 0.76
COL6A2-205ENST00000413758 LBHD1Q9BQE6 289 aaPredicted RBP19.82■□□□□ 0.76
COL6A2-205ENST00000413758 RNF41Q9H4P4 317 aaPredicted RBP19.82■□□□□ 0.76
COL6A2-205ENST00000413758 SYNGAP1Q96PV0 1343 aa19.81■□□□□ 0.76
COL6A2-205ENST00000413758 DNAJC25-GNG10A0A024R161 153 aa19.81■□□□□ 0.76
COL6A2-205ENST00000413758 PLA2G6O60733 806 aa19.81■□□□□ 0.76
COL6A2-205ENST00000413758 PGK1P00558 417 aa19.81■□□□□ 0.76
COL6A2-205ENST00000413758 ZNF865P0CJ78 1059 aaPredicted RBP19.81■□□□□ 0.76
COL6A2-205ENST00000413758 BMP8BP34820 402 aa19.81■□□□□ 0.76
COL6A2-205ENST00000413758 MDM2Q00987 491 aaPredicted RBP19.81■□□□□ 0.76
COL6A2-205ENST00000413758 SLC39A5Q6ZMH5 540 aa19.81■□□□□ 0.76
COL6A2-205ENST00000413758 LENG1Q96BZ8 264 aaPredicted RBP19.81■□□□□ 0.76
COL6A2-205ENST00000413758 TRERF1Q96PN7 1200 aa19.81■□□□□ 0.76
COL6A2-205ENST00000413758 TMEM47Q9BQJ4 181 aa19.81■□□□□ 0.76
COL6A2-205ENST00000413758 GPCPD1Q9NPB8 672 aa19.81■□□□□ 0.76
COL6A2-205ENST00000413758 FAM184BQ9ULE4 1060 aa19.81■□□□□ 0.76
COL6A2-205ENST00000413758 PRR12Q9ULL5 1215 aa19.81■□□□□ 0.76
COL6A2-205ENST00000413758 FRMPD2Q68DX3 1309 aaPredicted RBP19.8■□□□□ 0.76
COL6A2-205ENST00000413758 POTEB2H3BUK9 544 aa19.8■□□□□ 0.76
COL6A2-205ENST00000413758 SNAI1O95863 264 aaPredicted RBP19.8■□□□□ 0.76
COL6A2-205ENST00000413758 PCP11498 1178 aaKnown RBP19.8■□□□□ 0.76
COL6A2-205ENST00000413758 TKFCQ3LXA3 575 aa19.8■□□□□ 0.76
COL6A2-205ENST00000413758 ZNF467Q7Z7K2 595 aaPredicted RBP19.8■□□□□ 0.76
COL6A2-205ENST00000413758 TBC1D10CQ8IV04 446 aa19.8■□□□□ 0.76
COL6A2-205ENST00000413758 PRDM5Q9NQX1 630 aaPredicted RBP19.8■□□□□ 0.76
COL6A2-205ENST00000413758 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.8■□□□□ 0.76
COL6A2-205ENST00000413758 CCPG1Q9ULG6 757 aa19.8■□□□□ 0.76
COL6A2-205ENST00000413758 SMCHD1A6NHR9 2005 aa19.8■□□□□ 0.76
COL6A2-205ENST00000413758 SLC16A2P36021 539 aa19.79■□□□□ 0.76
COL6A2-205ENST00000413758 TTBK2Q6IQ55 1244 aa19.79■□□□□ 0.76
COL6A2-205ENST00000413758 MAMDC4Q6UXC1 1216 aa19.79■□□□□ 0.76
COL6A2-205ENST00000413758 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.79■□□□□ 0.76
COL6A2-205ENST00000413758 ESR2Q92731 530 aa19.79■□□□□ 0.76
COL6A2-205ENST00000413758 TCP11L1Q9NUJ3 509 aa19.79■□□□□ 0.76
COL6A2-205ENST00000413758 ZNF536O15090 1300 aa19.78■□□□□ 0.76
COL6A2-205ENST00000413758 CNTN2Q02246 1040 aa19.78■□□□□ 0.76
COL6A2-205ENST00000413758 ACVR2BQ13705 512 aa19.78■□□□□ 0.76
COL6A2-205ENST00000413758 TRIM60Q495X7 471 aa19.78■□□□□ 0.76
COL6A2-205ENST00000413758 SYDE2Q5VT97 1194 aa19.78■□□□□ 0.76
COL6A2-205ENST00000413758 NSMFQ6X4W1 530 aa19.78■□□□□ 0.76
COL6A2-205ENST00000413758 ARMCX2Q7L311 632 aa19.78■□□□□ 0.76
COL6A2-205ENST00000413758 ZKSCAN3Q9BRR0 538 aa19.78■□□□□ 0.76
COL6A2-205ENST00000413758 A1CFQ9NQ94 594 aaKnown RBP19.78■□□□□ 0.76
COL6A2-205ENST00000413758 NOVP48745 357 aa19.77■□□□□ 0.76
COL6A2-205ENST00000413758 TDHQ8IZJ6 230 aa19.77■□□□□ 0.76
COL6A2-205ENST00000413758 ABHD16BQ9H3Z7 469 aa19.77■□□□□ 0.76
COL6A2-205ENST00000413758 PHF24Q9UPV7 400 aa19.77■□□□□ 0.76
COL6A2-205ENST00000413758 NEDD4P46934 1319 aa19.76■□□□□ 0.75
COL6A2-205ENST00000413758 SOX1O00570 391 aaPredicted RBP19.76■□□□□ 0.75
COL6A2-205ENST00000413758 IMMTQ16891 758 aaKnown RBP19.76■□□□□ 0.75
COL6A2-205ENST00000413758 MUM1L1Q5H9M0 696 aa19.76■□□□□ 0.75
COL6A2-205ENST00000413758 NOL8Q76FK4 1167 aaKnown RBP19.76■□□□□ 0.75
COL6A2-205ENST00000413758 CCDC144CPQ8IYA2 1237 aa19.76■□□□□ 0.75
COL6A2-205ENST00000413758 TTC14Q96N46 770 aa19.76■□□□□ 0.75
COL6A2-205ENST00000413758 SPC25Q9HBM1 224 aa19.76■□□□□ 0.75
COL6A2-205ENST00000413758 CTNNA3Q9UI47 895 aa19.76■□□□□ 0.75
COL6A2-205ENST00000413758 SYNRGQ9UMZ2 1314 aa19.76■□□□□ 0.75
COL6A2-205ENST00000413758 ASB14A6NK59 587 aa19.75■□□□□ 0.75
COL6A2-205ENST00000413758 KDM4AO75164 1064 aa19.75■□□□□ 0.75
COL6A2-205ENST00000413758 ICAM1P05362 532 aa19.75■□□□□ 0.75
COL6A2-205ENST00000413758 PDE4AP27815 886 aa19.75■□□□□ 0.75
COL6A2-205ENST00000413758 CCDC144BQ3MJ40 725 aa19.75■□□□□ 0.75
COL6A2-205ENST00000413758 IQCA1Q86XH1 822 aa19.75■□□□□ 0.75
COL6A2-205ENST00000413758 FAM133AQ8N9E0 248 aa19.75■□□□□ 0.75
COL6A2-205ENST00000413758 LRCH3Q96II8 777 aa19.75■□□□□ 0.75
COL6A2-205ENST00000413758 FGD4Q96M96 766 aa19.75■□□□□ 0.75
COL6A2-205ENST00000413758 DSCC1Q9BVC3 393 aa19.75■□□□□ 0.75
COL6A2-205ENST00000413758 A0A1W2PQ45 241 aaPredicted RBP19.74■□□□□ 0.75
COL6A2-205ENST00000413758 A0A1W2PQY0 241 aa19.74■□□□□ 0.75
COL6A2-205ENST00000413758 DUSP11O75319 330 aaKnown RBP19.74■□□□□ 0.75
COL6A2-205ENST00000413758 C6orf222P0C671 652 aaPredicted RBP19.74■□□□□ 0.75
COL6A2-205ENST00000413758 PDHBP11177 359 aa19.74■□□□□ 0.75
COL6A2-205ENST00000413758 CCDC178Q5BJE1 867 aa19.74■□□□□ 0.75
COL6A2-205ENST00000413758 TTC22Q5TAA0 569 aa19.74■□□□□ 0.75
COL6A2-205ENST00000413758 BTNL9Q6UXG8 535 aa19.74■□□□□ 0.75
COL6A2-205ENST00000413758 VTI1AQ96AJ9 217 aa19.74■□□□□ 0.75
COL6A2-205ENST00000413758 RANBP17Q9H2T7 1088 aaKnown RBP19.74■□□□□ 0.75
COL6A2-205ENST00000413758 MCM3APO60318 1980 aa19.74■□□□□ 0.75
COL6A2-205ENST00000413758 SOWAHBA6NEL2 793 aa19.73■□□□□ 0.75
COL6A2-205ENST00000413758 B4E1Z4 1266 aa19.73■□□□□ 0.75
COL6A2-205ENST00000413758 ADAMTS4O75173 837 aa19.73■□□□□ 0.75
COL6A2-205ENST00000413758 ACLYP53396 1101 aa19.73■□□□□ 0.75
COL6A2-205ENST00000413758 TLE2Q04725 743 aa19.73■□□□□ 0.75
COL6A2-205ENST00000413758 ZNF543Q08ER8 600 aa19.73■□□□□ 0.75
COL6A2-205ENST00000413758 KCNA10Q16322 511 aa19.73■□□□□ 0.75
COL6A2-205ENST00000413758 NUP133Q8WUM0 1156 aa19.73■□□□□ 0.75
COL6A2-205ENST00000413758 TSEN34Q9BSV6 310 aaKnown RBP19.73■□□□□ 0.75
COL6A2-205ENST00000413758 KAT14Q9H8E8 782 aa19.73■□□□□ 0.75
COL6A2-205ENST00000413758 STARD7Q9NQZ5 370 aa19.73■□□□□ 0.75
COL6A2-205ENST00000413758 CYP39A1Q9NYL5 469 aa19.73■□□□□ 0.75
COL6A2-205ENST00000413758 PTPDC1A2A3K4 754 aa19.72■□□□□ 0.75
COL6A2-205ENST00000413758 PQBP1O60828 265 aaKnown RBP19.72■□□□□ 0.75
COL6A2-205ENST00000413758 SNX17Q15036 470 aa19.72■□□□□ 0.75
COL6A2-205ENST00000413758 DGKHQ86XP1 1220 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms