RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 SNHG28P0DPA3 235 aa22.11■■□□□ 1.13
TRIM56-202ENST00000412507 ZNF543Q08ER8 600 aa22.11■■□□□ 1.13
TRIM56-202ENST00000412507 SYDE2Q5VT97 1194 aa22.11■■□□□ 1.13
TRIM56-202ENST00000412507 STOX1Q6ZVD7 989 aa22.11■■□□□ 1.13
TRIM56-202ENST00000412507 DDX11Q96FC9 970 aa22.11■■□□□ 1.13
TRIM56-202ENST00000412507 UBAC1Q9BSL1 405 aa22.11■■□□□ 1.13
TRIM56-202ENST00000412507 HOMER2Q9NSB8 354 aa22.11■■□□□ 1.13
TRIM56-202ENST00000412507 ZNF792Q3KQV3 632 aa22.1■■□□□ 1.13
TRIM56-202ENST00000412507 UBE2Q1Q7Z7E8 422 aa22.1■■□□□ 1.13
TRIM56-202ENST00000412507 TRPV1Q8NER1 839 aa22.1■■□□□ 1.13
TRIM56-202ENST00000412507 CHST13Q8NET6 341 aa22.1■■□□□ 1.13
TRIM56-202ENST00000412507 FBXO40Q9UH90 709 aa22.1■■□□□ 1.13
TRIM56-202ENST00000412507 GOLGA8HP0CJ92 632 aa22.09■■□□□ 1.13
TRIM56-202ENST00000412507 ALAS1P13196 640 aa22.09■■□□□ 1.13
TRIM56-202ENST00000412507 CYBAP13498 195 aa22.09■■□□□ 1.13
TRIM56-202ENST00000412507 CAPN2P17655 700 aa22.09■■□□□ 1.13
TRIM56-202ENST00000412507 CNGA1P29973 690 aa22.09■■□□□ 1.13
TRIM56-202ENST00000412507 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.09■■□□□ 1.13
TRIM56-202ENST00000412507 ANKRD35Q8N283 1001 aa22.09■■□□□ 1.13
TRIM56-202ENST00000412507 RANBP17Q9H2T7 1088 aaKnown RBP22.09■■□□□ 1.13
TRIM56-202ENST00000412507 ANO2Q9NQ90 1003 aa22.09■■□□□ 1.13
TRIM56-202ENST00000412507 RNF146Q9NTX7 359 aa22.09■■□□□ 1.13
TRIM56-202ENST00000412507 OGDHLQ9ULD0 1010 aa22.09■■□□□ 1.13
TRIM56-202ENST00000412507 DIS3Q9Y2L1 958 aaKnown RBP22.09■■□□□ 1.13
TRIM56-202ENST00000412507 SEC23AQ15436 765 aa22.08■■□□□ 1.13
TRIM56-202ENST00000412507 PRAMEF19Q5SWL8 479 aa22.08■■□□□ 1.13
TRIM56-202ENST00000412507 IFIT1BQ5T764 474 aaKnown RBP22.08■■□□□ 1.13
TRIM56-202ENST00000412507 LHX8Q68G74 356 aa22.08■■□□□ 1.13
TRIM56-202ENST00000412507 RALYLQ86SE5 291 aaKnown RBP22.08■■□□□ 1.13
TRIM56-202ENST00000412507 NCOA7Q8NI08 942 aa22.08■■□□□ 1.13
TRIM56-202ENST00000412507 TRERF1Q96PN7 1200 aa22.08■■□□□ 1.13
TRIM56-202ENST00000412507 ACAD9Q9H845 621 aa22.08■■□□□ 1.13
TRIM56-202ENST00000412507 DNAJC25-GNG10A0A024R161 153 aa22.07■■□□□ 1.12
TRIM56-202ENST00000412507 CDC45O75419 566 aa22.07■■□□□ 1.12
TRIM56-202ENST00000412507 TAL1P17542 331 aaPredicted RBP22.07■■□□□ 1.12
TRIM56-202ENST00000412507 TKFCQ3LXA3 575 aa22.07■■□□□ 1.12
TRIM56-202ENST00000412507 GPATCH4Q5T3I0 446 aaKnown RBP22.07■■□□□ 1.12
TRIM56-202ENST00000412507 DIS3LQ8TF46 1054 aaKnown RBP22.07■■□□□ 1.12
TRIM56-202ENST00000412507 PAWRQ96IZ0 340 aaKnown RBP22.07■■□□□ 1.12
TRIM56-202ENST00000412507 TINF2Q9BSI4 451 aa22.07■■□□□ 1.12
TRIM56-202ENST00000412507 CPVLQ9H3G5 476 aa22.07■■□□□ 1.12
TRIM56-202ENST00000412507 CCPG1Q9ULG6 757 aa22.07■■□□□ 1.12
TRIM56-202ENST00000412507 ICAM1P05362 532 aa22.06■■□□□ 1.12
TRIM56-202ENST00000412507 CHST3Q7LGC8 479 aa22.06■■□□□ 1.12
TRIM56-202ENST00000412507 ANKLE1Q8NAG6 615 aa22.06■■□□□ 1.12
TRIM56-202ENST00000412507 UBA5Q9GZZ9 404 aa22.06■■□□□ 1.12
TRIM56-202ENST00000412507 PPP4R2Q9NY27 417 aa22.06■■□□□ 1.12
TRIM56-202ENST00000412507 DDX20Q9UHI6 824 aaKnown RBP22.06■■□□□ 1.12
TRIM56-202ENST00000412507 SLC27A2O14975 620 aa22.05■■□□□ 1.12
TRIM56-202ENST00000412507 MNX1P50219 401 aaPredicted RBP22.05■■□□□ 1.12
TRIM56-202ENST00000412507 MUM1L1Q5H9M0 696 aa22.05■■□□□ 1.12
TRIM56-202ENST00000412507 CASC1Q6TDU7 716 aa22.05■■□□□ 1.12
TRIM56-202ENST00000412507 IFIT3O14879 490 aaKnown RBP22.04■■□□□ 1.12
TRIM56-202ENST00000412507 ANTXR2P58335 489 aa22.04■■□□□ 1.12
TRIM56-202ENST00000412507 NECTIN1Q15223 517 aa22.04■■□□□ 1.12
TRIM56-202ENST00000412507 ASPRV1Q53RT3 343 aa22.04■■□□□ 1.12
TRIM56-202ENST00000412507 CREB3L3Q68CJ9 461 aa22.04■■□□□ 1.12
TRIM56-202ENST00000412507 MB21D2Q8IYB1 491 aaPredicted RBP22.04■■□□□ 1.12
TRIM56-202ENST00000412507 A1CFQ9NQ94 594 aaKnown RBP22.04■■□□□ 1.12
TRIM56-202ENST00000412507 LRRC37A2A6NM11 1700 aa22.03■■□□□ 1.12
TRIM56-202ENST00000412507 ERICH2A1L162 156 aa22.03■■□□□ 1.12
TRIM56-202ENST00000412507 MSCO60682 206 aa22.03■■□□□ 1.12
TRIM56-202ENST00000412507 PARP1P09874 1014 aaKnown RBP22.03■■□□□ 1.12
TRIM56-202ENST00000412507 CNTN2Q02246 1040 aa22.03■■□□□ 1.12
TRIM56-202ENST00000412507 ERICH6BQ5W0A0 696 aa22.03■■□□□ 1.12
TRIM56-202ENST00000412507 ANO1Q5XXA6 986 aa22.03■■□□□ 1.12
TRIM56-202ENST00000412507 NECAB2Q7Z6G3 386 aa22.03■■□□□ 1.12
TRIM56-202ENST00000412507 FGD4Q96M96 766 aa22.03■■□□□ 1.12
TRIM56-202ENST00000412507 SENP2Q9HC62 589 aa22.03■■□□□ 1.12
TRIM56-202ENST00000412507 POTEB2H3BUK9 544 aa22.02■■□□□ 1.12
TRIM56-202ENST00000412507 SEPT4O43236 478 aa22.02■■□□□ 1.12
TRIM56-202ENST00000412507 WTAPQ15007 396 aa22.02■■□□□ 1.12
TRIM56-202ENST00000412507 PRPF38BQ5VTL8 546 aaKnown RBP22.02■■□□□ 1.12
TRIM56-202ENST00000412507 DPF3Q92784 378 aa22.02■■□□□ 1.12
TRIM56-202ENST00000412507 HTATIP2Q9BUP3 242 aa22.02■■□□□ 1.12
TRIM56-202ENST00000412507 SART3Q15020 963 aaKnown RBP22.01■■□□□ 1.11
TRIM56-202ENST00000412507 TMEM67Q5HYA8 995 aa22.01■■□□□ 1.11
TRIM56-202ENST00000412507 MAMDC4Q6UXC1 1216 aa22.01■■□□□ 1.11
TRIM56-202ENST00000412507 NSMFQ6X4W1 530 aa22.01■■□□□ 1.11
TRIM56-202ENST00000412507 ZNF467Q7Z7K2 595 aaPredicted RBP22.01■■□□□ 1.11
TRIM56-202ENST00000412507 ADGRF4Q8IZF3 695 aa22.01■■□□□ 1.11
TRIM56-202ENST00000412507 STAG2Q8N3U4 1231 aa22.01■■□□□ 1.11
TRIM56-202ENST00000412507 MSL3Q8N5Y2 521 aaKnown RBP22.01■■□□□ 1.11
TRIM56-202ENST00000412507 FAM133AQ8N9E0 248 aa22.01■■□□□ 1.11
TRIM56-202ENST00000412507 NRBP1Q9UHY1 535 aa22.01■■□□□ 1.11
TRIM56-202ENST00000412507 PFASO15067 1338 aa22.01■■□□□ 1.11
TRIM56-202ENST00000412507 SYNGAP1Q96PV0 1343 aa22.01■■□□□ 1.11
TRIM56-202ENST00000412507 SNAI1O95863 264 aaPredicted RBP22■■□□□ 1.11
TRIM56-202ENST00000412507 COL9A3Q14050 684 aaPredicted RBP22■■□□□ 1.11
TRIM56-202ENST00000412507 IGDCC4Q8TDY8 1250 aa22■■□□□ 1.11
TRIM56-202ENST00000412507 C11orf49Q9H6J7 331 aa22■■□□□ 1.11
TRIM56-202ENST00000412507 VAT1LQ9HCJ6 419 aa22■■□□□ 1.11
TRIM56-202ENST00000412507 CYP39A1Q9NYL5 469 aa22■■□□□ 1.11
TRIM56-202ENST00000412507 CNPY2Q9Y2B0 182 aa22■■□□□ 1.11
TRIM56-202ENST00000412507 WDR19Q8NEZ3 1342 aa22■■□□□ 1.11
TRIM56-202ENST00000412507 SOWAHBA6NEL2 793 aa21.99■■□□□ 1.11
TRIM56-202ENST00000412507 NFIBO00712 420 aa21.99■■□□□ 1.11
TRIM56-202ENST00000412507 DHX16O60231 1041 aaKnown RBP21.99■■□□□ 1.11
TRIM56-202ENST00000412507 ZNF865P0CJ78 1059 aaPredicted RBP21.99■■□□□ 1.11
TRIM56-202ENST00000412507 CDC37Q16543 378 aaPredicted RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms