RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 SLAIN1Q8ND83 568 aa14□□□□□ -0.17
NEDD1-202ENST00000411739 SOCS4Q8WXH5 440 aa14□□□□□ -0.17
NEDD1-202ENST00000411739 FCER1AP12319 257 aa13.99□□□□□ -0.17
NEDD1-202ENST00000411739 PIBF1Q8WXW3 757 aa13.99□□□□□ -0.17
NEDD1-202ENST00000411739 UNC93B1Q9H1C4 597 aa13.99□□□□□ -0.17
NEDD1-202ENST00000411739 MAD2L2Q9UI95 211 aa13.99□□□□□ -0.17
NEDD1-202ENST00000411739 SMCHD1A6NHR9 2005 aa13.99□□□□□ -0.17
NEDD1-202ENST00000411739 MUM1L1Q5H9M0 696 aa13.99□□□□□ -0.17
NEDD1-202ENST00000411739 ADGRF4Q8IZF3 695 aa13.99□□□□□ -0.17
NEDD1-202ENST00000411739 RANBP17Q9H2T7 1088 aaKnown RBP13.99□□□□□ -0.17
NEDD1-202ENST00000411739 CCPG1Q9ULG6 757 aa13.99□□□□□ -0.17
NEDD1-202ENST00000411739 KIAA0100Q14667 2235 aaKnown RBP13.98□□□□□ -0.17
NEDD1-202ENST00000411739 KLRF2D3W0D1 207 aa13.98□□□□□ -0.17
NEDD1-202ENST00000411739 ATP2A1O14983 1001 aa13.98□□□□□ -0.17
NEDD1-202ENST00000411739 CCL5P13501 91 aa13.98□□□□□ -0.17
NEDD1-202ENST00000411739 CYP2C19P33261 490 aa13.98□□□□□ -0.17
NEDD1-202ENST00000411739 EXOSC10Q01780 885 aaKnown RBP13.98□□□□□ -0.17
NEDD1-202ENST00000411739 TROAPQ12815 778 aa13.98□□□□□ -0.17
NEDD1-202ENST00000411739 KCTD2Q14681 263 aa13.98□□□□□ -0.17
NEDD1-202ENST00000411739 SLC35G1Q2M3R5 365 aa13.98□□□□□ -0.17
NEDD1-202ENST00000411739 TSGA10IPQ3SY00 556 aa13.98□□□□□ -0.17
NEDD1-202ENST00000411739 GPATCH4Q5T3I0 446 aaKnown RBP13.98□□□□□ -0.17
NEDD1-202ENST00000411739 CATIPQ7Z7H3 387 aa13.98□□□□□ -0.17
NEDD1-202ENST00000411739 PXYLP1Q8TE99 480 aa13.98□□□□□ -0.17
NEDD1-202ENST00000411739 KCNB2Q92953 911 aa13.98□□□□□ -0.17
NEDD1-202ENST00000411739 TRERF1Q96PN7 1200 aa13.98□□□□□ -0.17
NEDD1-202ENST00000411739 APBA2Q99767 749 aa13.98□□□□□ -0.17
NEDD1-202ENST00000411739 RNF146Q9NTX7 359 aa13.98□□□□□ -0.17
NEDD1-202ENST00000411739 STRNO43815 780 aa13.98□□□□□ -0.17
NEDD1-202ENST00000411739 USH1GQ495M9 461 aa13.98□□□□□ -0.17
NEDD1-202ENST00000411739 ASPRV1Q53RT3 343 aa13.98□□□□□ -0.17
NEDD1-202ENST00000411739 DHX32Q7L7V1 743 aaKnown RBP13.98□□□□□ -0.17
NEDD1-202ENST00000411739 ZNF654Q8IZM8 581 aa13.98□□□□□ -0.17
NEDD1-202ENST00000411739 CMTR1Q8N1G2 835 aaKnown RBP13.98□□□□□ -0.17
NEDD1-202ENST00000411739 RNF208Q9H0X6 261 aa13.98□□□□□ -0.17
NEDD1-202ENST00000411739 CCDC69A6NI79 296 aa13.97□□□□□ -0.17
NEDD1-202ENST00000411739 EN2P19622 333 aaPredicted RBP13.97□□□□□ -0.17
NEDD1-202ENST00000411739 GRM4Q14833 912 aa13.97□□□□□ -0.17
NEDD1-202ENST00000411739 ANKRD35Q8N283 1001 aa13.97□□□□□ -0.17
NEDD1-202ENST00000411739 DDX11Q96FC9 970 aa13.97□□□□□ -0.17
NEDD1-202ENST00000411739 TMEM87BQ96K49 555 aa13.97□□□□□ -0.17
NEDD1-202ENST00000411739 JMJD4Q9H9V9 463 aa13.97□□□□□ -0.17
NEDD1-202ENST00000411739 DDX49Q9Y6V7 483 aaKnown RBP13.97□□□□□ -0.17
NEDD1-202ENST00000411739 PALM3A6NDB9 673 aaPredicted RBP13.97□□□□□ -0.17
NEDD1-202ENST00000411739 HMGCRP04035 888 aa13.97□□□□□ -0.17
NEDD1-202ENST00000411739 ICAM1P05362 532 aa13.97□□□□□ -0.17
NEDD1-202ENST00000411739 XRCC5P13010 732 aaKnown RBP13.97□□□□□ -0.17
NEDD1-202ENST00000411739 UBXN2AP68543 259 aa13.97□□□□□ -0.17
NEDD1-202ENST00000411739 KRT32Q14532 448 aa13.97□□□□□ -0.17
NEDD1-202ENST00000411739 CDC37Q16543 378 aaPredicted RBP13.97□□□□□ -0.17
NEDD1-202ENST00000411739 PRAMEF19Q5SWL8 479 aa13.97□□□□□ -0.17
NEDD1-202ENST00000411739 PURBQ96QR8 312 aaKnown RBP13.97□□□□□ -0.17
NEDD1-202ENST00000411739 NAP1L2Q9ULW6 460 aaPredicted RBP13.97□□□□□ -0.17
NEDD1-202ENST00000411739 BAZ2BQ9UIF8 2168 aaKnown RBP13.96□□□□□ -0.17
NEDD1-202ENST00000411739 FDX1P10109 184 aa13.96□□□□□ -0.17
NEDD1-202ENST00000411739 PRKAR2AP13861 404 aaKnown RBP13.96□□□□□ -0.17
NEDD1-202ENST00000411739 CASTP20810 708 aaKnown RBP13.96□□□□□ -0.17
NEDD1-202ENST00000411739 OAZ1P54368 228 aa13.96□□□□□ -0.17
NEDD1-202ENST00000411739 CACNB2Q08289 660 aaPredicted RBP13.96□□□□□ -0.17
NEDD1-202ENST00000411739 HOMER1Q86YM7 354 aa13.96□□□□□ -0.17
NEDD1-202ENST00000411739 LARP6Q9BRS8 491 aaKnown RBP13.96□□□□□ -0.17
NEDD1-202ENST00000411739 TMEM106CQ9BVX2 250 aa13.96□□□□□ -0.17
NEDD1-202ENST00000411739 BRPF3Q9ULD4 1205 aa13.96□□□□□ -0.17
NEDD1-202ENST00000411739 CNTN2Q02246 1040 aa13.96□□□□□ -0.18
NEDD1-202ENST00000411739 NSMFQ6X4W1 530 aa13.96□□□□□ -0.18
NEDD1-202ENST00000411739 MICU3Q86XE3 530 aa13.96□□□□□ -0.18
NEDD1-202ENST00000411739 CCDC82Q8N4S0 544 aa13.96□□□□□ -0.18
NEDD1-202ENST00000411739 ZNFX1Q9P2E3 1918 aaKnown RBP13.95□□□□□ -0.18
NEDD1-202ENST00000411739 NFIBO00712 420 aa13.95□□□□□ -0.18
NEDD1-202ENST00000411739 CYTH3O43739 400 aa13.95□□□□□ -0.18
NEDD1-202ENST00000411739 CCND3P30281 292 aaPredicted RBP13.95□□□□□ -0.18
NEDD1-202ENST00000411739 FGD1P98174 961 aa13.95□□□□□ -0.18
NEDD1-202ENST00000411739 QRICH1Q2TAL8 776 aa13.95□□□□□ -0.18
NEDD1-202ENST00000411739 BLOC1S2Q6QNY1 142 aa13.95□□□□□ -0.18
NEDD1-202ENST00000411739 Q6ZUG5 572 aa13.95□□□□□ -0.18
NEDD1-202ENST00000411739 CHST13Q8NET6 341 aa13.95□□□□□ -0.18
NEDD1-202ENST00000411739 UPF3BQ9BZI7 483 aaKnown RBP13.95□□□□□ -0.18
NEDD1-202ENST00000411739 ACAD9Q9H845 621 aa13.95□□□□□ -0.18
NEDD1-202ENST00000411739 A1CFQ9NQ94 594 aaKnown RBP13.95□□□□□ -0.18
NEDD1-202ENST00000411739 SLC12A7Q9Y666 1083 aa13.95□□□□□ -0.18
NEDD1-202ENST00000411739 PLEKHA8P1O95397 391 aa13.95□□□□□ -0.18
NEDD1-202ENST00000411739 HOXC6P09630 235 aa13.95□□□□□ -0.18
NEDD1-202ENST00000411739 ZNF792Q3KQV3 632 aa13.95□□□□□ -0.18
NEDD1-202ENST00000411739 ABRAQ8N0Z2 381 aa13.95□□□□□ -0.18
NEDD1-202ENST00000411739 MAML3Q96JK9 1138 aa13.95□□□□□ -0.18
NEDD1-202ENST00000411739 DEFB118Q96PH6 123 aa13.95□□□□□ -0.18
NEDD1-202ENST00000411739 PIGSQ96S52 555 aa13.95□□□□□ -0.18
NEDD1-202ENST00000411739 hCG_1642624A0A1W2PR95 340 aa13.94□□□□□ -0.18
NEDD1-202ENST00000411739 COPB2P35606 906 aa13.94□□□□□ -0.18
NEDD1-202ENST00000411739 LIFRP42702 1097 aa13.94□□□□□ -0.18
NEDD1-202ENST00000411739 APOBRQ0VD83 1088 aa13.94□□□□□ -0.18
NEDD1-202ENST00000411739 TBC1D5Q92609 795 aa13.94□□□□□ -0.18
NEDD1-202ENST00000411739 MKI67P46013 3256 aaKnown RBP13.94□□□□□ -0.18
NEDD1-202ENST00000411739 PPP1R11O60927 126 aaPredicted RBP13.93□□□□□ -0.18
NEDD1-202ENST00000411739 RPS6KB1P23443 525 aa13.93□□□□□ -0.18
NEDD1-202ENST00000411739 CNGA1P29973 690 aa13.93□□□□□ -0.18
NEDD1-202ENST00000411739 C8orf34Q49A92 452 aa13.93□□□□□ -0.18
NEDD1-202ENST00000411739 ANO1Q5XXA6 986 aa13.93□□□□□ -0.18
NEDD1-202ENST00000411739 TMTC2Q8N394 836 aa13.93□□□□□ -0.18
NEDD1-202ENST00000411739 TRPV1Q8NER1 839 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms