RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 FAM227BQ96M60 508 aa11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 CTAGE1Q96RT6 745 aa11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 ZSWIM4Q9H7M6 989 aa11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 SEC31BQ9NQW1 1179 aa11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 NEURL1BA8MQ27 555 aa11.9□□□□□ -0.5
NIF3L1-204ENST00000409357 PCCAP05165 728 aaPredicted RBP11.9□□□□□ -0.5
NIF3L1-204ENST00000409357 PAX7P23759 505 aa11.9□□□□□ -0.5
NIF3L1-204ENST00000409357 AOC3Q16853 763 aa11.9□□□□□ -0.5
NIF3L1-204ENST00000409357 LACTB2Q53H82 288 aaPredicted RBP11.9□□□□□ -0.5
NIF3L1-204ENST00000409357 ANO1Q5XXA6 986 aa11.9□□□□□ -0.5
NIF3L1-204ENST00000409357 CDCA2Q69YH5 1023 aaPredicted RBP11.9□□□□□ -0.5
NIF3L1-204ENST00000409357 NAIF1Q69YI7 327 aaPredicted RBP11.9□□□□□ -0.5
NIF3L1-204ENST00000409357 CD302Q8IX05 232 aa11.9□□□□□ -0.5
NIF3L1-204ENST00000409357 SELENOOQ9BVL4 669 aa11.9□□□□□ -0.5
NIF3L1-204ENST00000409357 FTOQ9C0B1 505 aaKnown RBP eCLIP11.9□□□□□ -0.5
NIF3L1-204ENST00000409357 CD248Q9HCU0 757 aa11.9□□□□□ -0.5
NIF3L1-204ENST00000409357 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.9□□□□□ -0.5
NIF3L1-204ENST00000409357 SH3BP1Q9Y3L3 701 aa11.9□□□□□ -0.5
NIF3L1-204ENST00000409357 SCN4AP35499 1836 aa11.9□□□□□ -0.51
NIF3L1-204ENST00000409357 A0A0D9SFI3 127 aa11.89□□□□□ -0.51
NIF3L1-204ENST00000409357 ANO9A1A5B4 782 aa11.89□□□□□ -0.51
NIF3L1-204ENST00000409357 FZD9O00144 591 aa11.89□□□□□ -0.51
NIF3L1-204ENST00000409357 PPFIA3O75145 1194 aa11.89□□□□□ -0.51
NIF3L1-204ENST00000409357 HSPA6P17066 643 aa11.89□□□□□ -0.51
NIF3L1-204ENST00000409357 SARSP49591 514 aaKnown RBP11.89□□□□□ -0.51
NIF3L1-204ENST00000409357 ADKP55263 362 aaKnown RBP11.89□□□□□ -0.51
NIF3L1-204ENST00000409357 LMNB2Q03252 620 aa11.89□□□□□ -0.51
NIF3L1-204ENST00000409357 TRIM14Q14142 442 aa11.89□□□□□ -0.51
NIF3L1-204ENST00000409357 RBBP5Q15291 538 aaKnown RBP11.89□□□□□ -0.51
NIF3L1-204ENST00000409357 PDCD2Q16342 344 aaPredicted RBP11.89□□□□□ -0.51
NIF3L1-204ENST00000409357 CC2D2BQ6DHV5 1058 aa11.89□□□□□ -0.51
NIF3L1-204ENST00000409357 CCDC70Q6NSX1 233 aa11.89□□□□□ -0.51
NIF3L1-204ENST00000409357 EMBQ6PCB8 327 aa11.89□□□□□ -0.51
NIF3L1-204ENST00000409357 PPFIBP1Q86W92 1011 aa11.89□□□□□ -0.51
NIF3L1-204ENST00000409357 APLFQ8IW19 511 aaPredicted RBP11.89□□□□□ -0.51
NIF3L1-204ENST00000409357 PARP9Q8IXQ6 854 aa11.89□□□□□ -0.51
NIF3L1-204ENST00000409357 REM2Q8IYK8 340 aaPredicted RBP11.89□□□□□ -0.51
NIF3L1-204ENST00000409357 MMGT1Q8N4V1 131 aa11.89□□□□□ -0.51
NIF3L1-204ENST00000409357 PDILTQ8N807 584 aa11.89□□□□□ -0.51
NIF3L1-204ENST00000409357 EHBP1Q8NDI1 1231 aa11.89□□□□□ -0.51
NIF3L1-204ENST00000409357 CAVIN3Q969G5 261 aa11.89□□□□□ -0.51
NIF3L1-204ENST00000409357 SLC40A1Q9NP59 571 aa11.89□□□□□ -0.51
NIF3L1-204ENST00000409357 DDX20Q9UHI6 824 aaKnown RBP11.89□□□□□ -0.51
NIF3L1-204ENST00000409357 BIN1O00499 593 aa11.88□□□□□ -0.51
NIF3L1-204ENST00000409357 MFAP3LO75121 409 aa11.88□□□□□ -0.51
NIF3L1-204ENST00000409357 BBOX1O75936 387 aa11.88□□□□□ -0.51
NIF3L1-204ENST00000409357 VEGFAP15692 232 aaPredicted RBP11.88□□□□□ -0.51
NIF3L1-204ENST00000409357 CLNS1AP54105 237 aaKnown RBP11.88□□□□□ -0.51
NIF3L1-204ENST00000409357 HTRA3P83110 453 aa11.88□□□□□ -0.51
NIF3L1-204ENST00000409357 XRCC4Q13426 336 aa11.88□□□□□ -0.51
NIF3L1-204ENST00000409357 RIPK1Q13546 671 aa11.88□□□□□ -0.51
NIF3L1-204ENST00000409357 RESP18Q5W5W9 173 aa11.88□□□□□ -0.51
NIF3L1-204ENST00000409357 CCDC102BQ68D86 513 aa11.88□□□□□ -0.51
NIF3L1-204ENST00000409357 DPY19L2Q6NUT2 758 aa11.88□□□□□ -0.51
NIF3L1-204ENST00000409357 SYNE3Q6ZMZ3 975 aa11.88□□□□□ -0.51
NIF3L1-204ENST00000409357 ARMC9Q7Z3E5 817 aa11.88□□□□□ -0.51
NIF3L1-204ENST00000409357 SP8Q8IXZ3 490 aa11.88□□□□□ -0.51
NIF3L1-204ENST00000409357 RBM46Q8TBY0 533 aaKnown RBP11.88□□□□□ -0.51
NIF3L1-204ENST00000409357 CCHCR1Q8TD31 782 aa11.88□□□□□ -0.51
NIF3L1-204ENST00000409357 DESI2Q9BSY9 194 aa11.88□□□□□ -0.51
NIF3L1-204ENST00000409357 MOV10L1Q9BXT6 1211 aaKnown RBP11.88□□□□□ -0.51
NIF3L1-204ENST00000409357 IRX2Q9BZI1 471 aaPredicted RBP11.88□□□□□ -0.51
NIF3L1-204ENST00000409357 TMX4Q9H1E5 349 aaPredicted RBP11.88□□□□□ -0.51
NIF3L1-204ENST00000409357 HAUS4Q9H6D7 363 aa11.88□□□□□ -0.51
NIF3L1-204ENST00000409357 LAMA4Q16363 1823 aa11.88□□□□□ -0.51
NIF3L1-204ENST00000409357 PPIP5K2O43314 1243 aa11.87□□□□□ -0.51
NIF3L1-204ENST00000409357 IPO7O95373 1038 aaKnown RBP11.87□□□□□ -0.51
NIF3L1-204ENST00000409357 FAM107AO95990 144 aa11.87□□□□□ -0.51
NIF3L1-204ENST00000409357 GHRP10912 638 aa11.87□□□□□ -0.51
NIF3L1-204ENST00000409357 MDM2Q00987 491 aaPredicted RBP11.87□□□□□ -0.51
NIF3L1-204ENST00000409357 COL9A3Q14050 684 aaPredicted RBP11.87□□□□□ -0.51
NIF3L1-204ENST00000409357 BEND3Q5T5X7 828 aa11.87□□□□□ -0.51
NIF3L1-204ENST00000409357 PPP4R3AQ6IN85 833 aa11.87□□□□□ -0.51
NIF3L1-204ENST00000409357 DPP8Q6V1X1 898 aaPredicted RBP11.87□□□□□ -0.51
NIF3L1-204ENST00000409357 CCDC13Q8IYE1 715 aa11.87□□□□□ -0.51
NIF3L1-204ENST00000409357 FUKQ8N0W3 1084 aa11.87□□□□□ -0.51
NIF3L1-204ENST00000409357 LARGE2Q8N3Y3 721 aa11.87□□□□□ -0.51
NIF3L1-204ENST00000409357 RSRC1Q96IZ7 334 aaKnown RBP11.87□□□□□ -0.51
NIF3L1-204ENST00000409357 GPR101Q96P66 508 aaPredicted RBP11.87□□□□□ -0.51
NIF3L1-204ENST00000409357 RTFDC1Q9BY42 306 aaPredicted RBP11.87□□□□□ -0.51
NIF3L1-204ENST00000409357 LZTFL1Q9NQ48 299 aa11.87□□□□□ -0.51
NIF3L1-204ENST00000409357 CLIC4Q9Y696 253 aa11.87□□□□□ -0.51
NIF3L1-204ENST00000409357 ADAMTSL1Q8N6G6 1762 aa11.87□□□□□ -0.51
NIF3L1-204ENST00000409357 SOWAHDA6NJG2 315 aa11.87□□□□□ -0.51
NIF3L1-204ENST00000409357 MGRN1O60291 552 aa11.87□□□□□ -0.51
NIF3L1-204ENST00000409357 DTNBO60941 627 aa11.87□□□□□ -0.51
NIF3L1-204ENST00000409357 PRLRP16471 622 aa11.87□□□□□ -0.51
NIF3L1-204ENST00000409357 NEXNQ0ZGT2 675 aa11.87□□□□□ -0.51
NIF3L1-204ENST00000409357 SLC5A9Q2M3M2 681 aa11.87□□□□□ -0.51
NIF3L1-204ENST00000409357 NAA35Q5VZE5 725 aa11.87□□□□□ -0.51
NIF3L1-204ENST00000409357 KANK3Q6NY19 840 aa11.87□□□□□ -0.51
NIF3L1-204ENST00000409357 CYB5D1Q6P9G0 228 aa11.87□□□□□ -0.51
NIF3L1-204ENST00000409357 CYP26C1Q6V0L0 522 aa11.87□□□□□ -0.51
NIF3L1-204ENST00000409357 APTXQ7Z2E3 356 aaKnown RBP11.87□□□□□ -0.51
NIF3L1-204ENST00000409357 L3MBTL3Q96JM7 780 aaPredicted RBP11.87□□□□□ -0.51
NIF3L1-204ENST00000409357 TCEANC2Q96MN5 208 aa11.87□□□□□ -0.51
NIF3L1-204ENST00000409357 ANKRD27Q96NW4 1050 aa11.87□□□□□ -0.51
NIF3L1-204ENST00000409357 EBF2Q9HAK2 575 aa11.87□□□□□ -0.51
NIF3L1-204ENST00000409357 SAR1BQ9Y6B6 198 aa11.87□□□□□ -0.51
NIF3L1-204ENST00000409357 SCN9AQ15858 1988 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms