RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 POU3F3P20264 500 aaPredicted RBP15.52■□□□□ 0.07
CHRNA1-203ENST00000409219 CDK8P49336 464 aa15.52■□□□□ 0.07
CHRNA1-203ENST00000409219 NKX3-2P78367 333 aa15.52■□□□□ 0.07
CHRNA1-203ENST00000409219 BEX3Q00994 111 aa15.52■□□□□ 0.07
CHRNA1-203ENST00000409219 NOC4LQ9BVI4 516 aaKnown RBP15.52■□□□□ 0.07
CHRNA1-203ENST00000409219 KATNBL1Q9H079 304 aa15.52■□□□□ 0.07
CHRNA1-203ENST00000409219 ARMT1Q9H993 441 aa15.52■□□□□ 0.07
CHRNA1-203ENST00000409219 ASTN1O14525 1302 aa15.51■□□□□ 0.07
CHRNA1-203ENST00000409219 COL4A4P53420 1690 aaPredicted RBP15.51■□□□□ 0.07
CHRNA1-203ENST00000409219 FAM86C2PA6NEL3 165 aa15.51■□□□□ 0.07
CHRNA1-203ENST00000409219 PRKAB2O43741 272 aa15.51■□□□□ 0.07
CHRNA1-203ENST00000409219 TLL1O43897 1013 aa15.51■□□□□ 0.07
CHRNA1-203ENST00000409219 RAD21O60216 631 aa15.51■□□□□ 0.07
CHRNA1-203ENST00000409219 KRT40Q6A162 431 aa15.51■□□□□ 0.07
CHRNA1-203ENST00000409219 CXCL17Q6UXB2 119 aa15.51■□□□□ 0.07
CHRNA1-203ENST00000409219 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.51■□□□□ 0.07
CHRNA1-203ENST00000409219 ARMCX2Q7L311 632 aa15.51■□□□□ 0.07
CHRNA1-203ENST00000409219 TMEM57Q8N5G2 664 aa15.51■□□□□ 0.07
CHRNA1-203ENST00000409219 FRAT1Q92837 279 aaPredicted RBP15.51■□□□□ 0.07
CHRNA1-203ENST00000409219 NUP88Q99567 741 aaPredicted RBP15.51■□□□□ 0.07
CHRNA1-203ENST00000409219 SLF1Q9BQI6 1058 aa15.51■□□□□ 0.07
CHRNA1-203ENST00000409219 KANSL2Q9H9L4 492 aa15.51■□□□□ 0.07
CHRNA1-203ENST00000409219 BRWD1Q9NSI6 2320 aa15.5■□□□□ 0.07
CHRNA1-203ENST00000409219 SCN5AQ14524 2016 aa15.5■□□□□ 0.07
CHRNA1-203ENST00000409219 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.5■□□□□ 0.07
CHRNA1-203ENST00000409219 EPOPA6NHQ4 379 aa15.5■□□□□ 0.07
CHRNA1-203ENST00000409219 ZBBXA8MT70 800 aa15.5■□□□□ 0.07
CHRNA1-203ENST00000409219 IPO8O15397 1037 aaKnown RBP15.5■□□□□ 0.07
CHRNA1-203ENST00000409219 GTPBP6O43824 516 aaPredicted RBP15.5■□□□□ 0.07
CHRNA1-203ENST00000409219 B4GALT4O60513 344 aa15.5■□□□□ 0.07
CHRNA1-203ENST00000409219 GPR37L1O60883 481 aa15.5■□□□□ 0.07
CHRNA1-203ENST00000409219 CA3P07451 260 aa15.5■□□□□ 0.07
CHRNA1-203ENST00000409219 ATP2A2P16615 1042 aaKnown RBP15.5■□□□□ 0.07
CHRNA1-203ENST00000409219 TTF1Q15361 905 aaPredicted RBP15.5■□□□□ 0.07
CHRNA1-203ENST00000409219 C12orf60Q5U649 245 aa15.5■□□□□ 0.07
CHRNA1-203ENST00000409219 C16orf86Q6ZW13 317 aa15.5■□□□□ 0.07
CHRNA1-203ENST00000409219 COG5Q9UP83 839 aa15.5■□□□□ 0.07
CHRNA1-203ENST00000409219 GRIN2DO15399 1336 aa15.5■□□□□ 0.07
CHRNA1-203ENST00000409219 ATP2A1O14983 1001 aa15.49■□□□□ 0.07
CHRNA1-203ENST00000409219 ITGA7Q13683 1181 aa15.49■□□□□ 0.07
CHRNA1-203ENST00000409219 AACSQ86V21 672 aa15.49■□□□□ 0.07
CHRNA1-203ENST00000409219 CCDC144CPQ8IYA2 1237 aa15.49■□□□□ 0.07
CHRNA1-203ENST00000409219 SCLYQ96I15 445 aa15.49■□□□□ 0.07
CHRNA1-203ENST00000409219 CERS4Q9HA82 394 aa15.49■□□□□ 0.07
CHRNA1-203ENST00000409219 SLC4A3P48751 1232 aa15.48■□□□□ 0.07
CHRNA1-203ENST00000409219 TTLL4Q14679 1199 aa15.48■□□□□ 0.07
CHRNA1-203ENST00000409219 ALYREFQ86V81 257 aaKnown RBP15.48■□□□□ 0.07
CHRNA1-203ENST00000409219 CPXCR1Q8N123 301 aa15.48■□□□□ 0.07
CHRNA1-203ENST00000409219 AGBL1Q96MI9 1066 aa15.48■□□□□ 0.07
CHRNA1-203ENST00000409219 TRPV6Q9H1D0 765 aa15.48■□□□□ 0.07
CHRNA1-203ENST00000409219 ATP8A2Q9NTI2 1148 aa15.48■□□□□ 0.07
CHRNA1-203ENST00000409219 MYH4Q9Y623 1939 aa15.48■□□□□ 0.07
CHRNA1-203ENST00000409219 CABYRO75952 493 aa15.47■□□□□ 0.07
CHRNA1-203ENST00000409219 ARHGEF15O94989 841 aa15.47■□□□□ 0.07
CHRNA1-203ENST00000409219 MBD4O95243 580 aa15.47■□□□□ 0.07
CHRNA1-203ENST00000409219 PTGS1P23219 599 aa15.47■□□□□ 0.07
CHRNA1-203ENST00000409219 SLFNL1Q499Z3 407 aa15.47■□□□□ 0.07
CHRNA1-203ENST00000409219 TMEM67Q5HYA8 995 aa15.47■□□□□ 0.07
CHRNA1-203ENST00000409219 TLK2Q86UE8 772 aa15.47■□□□□ 0.07
CHRNA1-203ENST00000409219 RPUSD2Q8IZ73 545 aaKnown RBP15.47■□□□□ 0.07
CHRNA1-203ENST00000409219 ANKRD35Q8N283 1001 aa15.47■□□□□ 0.07
CHRNA1-203ENST00000409219 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.47■□□□□ 0.07
CHRNA1-203ENST00000409219 RAVER2Q9HCJ3 691 aaKnown RBP15.47■□□□□ 0.07
CHRNA1-203ENST00000409219 GNEQ9Y223 722 aaKnown RBP15.47■□□□□ 0.07
CHRNA1-203ENST00000409219 TANC1Q9C0D5 1861 aa15.47■□□□□ 0.07
CHRNA1-203ENST00000409219 USP17L12C9JPN9 530 aa15.46■□□□□ 0.07
CHRNA1-203ENST00000409219 USP17L21D6R901 530 aa15.46■□□□□ 0.07
CHRNA1-203ENST00000409219 GOLIM4O00461 696 aa15.46■□□□□ 0.07
CHRNA1-203ENST00000409219 TNFAIP2Q03169 654 aa15.46■□□□□ 0.07
CHRNA1-203ENST00000409219 FSCN1Q16658 493 aaKnown RBP15.46■□□□□ 0.07
CHRNA1-203ENST00000409219 PRPF38AQ8NAV1 312 aaKnown RBP15.46■□□□□ 0.07
CHRNA1-203ENST00000409219 HLA-CQ95604 372 aa15.46■□□□□ 0.07
CHRNA1-203ENST00000409219 DNAJC2Q99543 621 aaKnown RBP15.46■□□□□ 0.07
CHRNA1-203ENST00000409219 MYH7P12883 1935 aa15.46■□□□□ 0.07
CHRNA1-203ENST00000409219 PTPRSQ13332 1948 aa15.46■□□□□ 0.07
CHRNA1-203ENST00000409219 PSMC6P62333 389 aa15.46■□□□□ 0.06
CHRNA1-203ENST00000409219 CNTN2Q02246 1040 aa15.46■□□□□ 0.06
CHRNA1-203ENST00000409219 CD320Q9NPF0 282 aa15.46■□□□□ 0.06
CHRNA1-203ENST00000409219 FBXO40Q9UH90 709 aa15.46■□□□□ 0.06
CHRNA1-203ENST00000409219 EXOC6BQ9Y2D4 811 aa15.46■□□□□ 0.06
CHRNA1-203ENST00000409219 ZBED9Q6R2W3 1325 aa15.45■□□□□ 0.06
CHRNA1-203ENST00000409219 NDUFB10O96000 172 aa15.45■□□□□ 0.06
CHRNA1-203ENST00000409219 PFKMP08237 780 aa15.45■□□□□ 0.06
CHRNA1-203ENST00000409219 TAP1Q03518 808 aa15.45■□□□□ 0.06
CHRNA1-203ENST00000409219 NOL8Q76FK4 1167 aaKnown RBP15.45■□□□□ 0.06
CHRNA1-203ENST00000409219 AMOTL1Q8IY63 956 aa15.45■□□□□ 0.06
CHRNA1-203ENST00000409219 CHST13Q8NET6 341 aa15.45■□□□□ 0.06
CHRNA1-203ENST00000409219 ARNTL2Q8WYA1 636 aa15.45■□□□□ 0.06
CHRNA1-203ENST00000409219 SEZ6LQ9BYH1 1024 aa15.45■□□□□ 0.06
CHRNA1-203ENST00000409219 SLC38A10Q9HBR0 1119 aa15.45■□□□□ 0.06
CHRNA1-203ENST00000409219 IL1RAPL2Q9NP60 686 aa15.45■□□□□ 0.06
CHRNA1-203ENST00000409219 LCTP09848 1927 aa15.44■□□□□ 0.06
CHRNA1-203ENST00000409219 F5H6K3 240 aa15.44■□□□□ 0.06
CHRNA1-203ENST00000409219 PI4K2BG5E9Z4 385 aa15.44■□□□□ 0.06
CHRNA1-203ENST00000409219 ZBED4O75132 1171 aa15.44■□□□□ 0.06
CHRNA1-203ENST00000409219 ADD2P35612 726 aa15.44■□□□□ 0.06
CHRNA1-203ENST00000409219 KLRC3Q07444 240 aa15.44■□□□□ 0.06
CHRNA1-203ENST00000409219 SPRED2Q7Z698 418 aa15.44■□□□□ 0.06
CHRNA1-203ENST00000409219 FAM133AQ8N9E0 248 aa15.44■□□□□ 0.06
CHRNA1-203ENST00000409219 KIFC2Q96AC6 838 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms