RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 SAFBQ15424 915 aaKnown RBP eCLIP14.82□□□□□ -0.04
SMARCB1-203ENST00000407082 LRIT3Q3SXY7 679 aa14.82□□□□□ -0.04
SMARCB1-203ENST00000407082 APOA5Q6Q788 366 aa14.82□□□□□ -0.04
SMARCB1-203ENST00000407082 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.82□□□□□ -0.04
SMARCB1-203ENST00000407082 IGDCC4Q8TDY8 1250 aa14.82□□□□□ -0.04
SMARCB1-203ENST00000407082 MRPS27Q92552 414 aaKnown RBP14.82□□□□□ -0.04
SMARCB1-203ENST00000407082 NBPF3Q9H094 633 aa14.82□□□□□ -0.04
SMARCB1-203ENST00000407082 ANAPC4Q9UJX5 808 aa14.82□□□□□ -0.04
SMARCB1-203ENST00000407082 MGAMO43451 1857 aa14.81□□□□□ -0.04
SMARCB1-203ENST00000407082 CDK5RAP2Q96SN8 1893 aa14.81□□□□□ -0.04
SMARCB1-203ENST00000407082 B4E1Z4 1266 aa14.81□□□□□ -0.04
SMARCB1-203ENST00000407082 GOLGA6L19H0YKK7 550 aa14.81□□□□□ -0.04
SMARCB1-203ENST00000407082 OFD1O75665 1012 aa14.81□□□□□ -0.04
SMARCB1-203ENST00000407082 SLC3A2P08195 630 aaKnown RBP14.81□□□□□ -0.04
SMARCB1-203ENST00000407082 WTAPQ15007 396 aa14.81□□□□□ -0.04
SMARCB1-203ENST00000407082 STX1AQ16623 288 aa14.81□□□□□ -0.04
SMARCB1-203ENST00000407082 TBC1D10CQ8IV04 446 aa14.81□□□□□ -0.04
SMARCB1-203ENST00000407082 ANKRD13CQ8N6S4 541 aa14.81□□□□□ -0.04
SMARCB1-203ENST00000407082 ESR2Q92731 530 aa14.81□□□□□ -0.04
SMARCB1-203ENST00000407082 FAM161BQ96MY7 647 aa14.81□□□□□ -0.04
SMARCB1-203ENST00000407082 NAP1L5Q96NT1 182 aaPredicted RBP14.81□□□□□ -0.04
SMARCB1-203ENST00000407082 USP28Q96RU2 1077 aa14.81□□□□□ -0.04
SMARCB1-203ENST00000407082 ALG1Q9BT22 464 aa14.81□□□□□ -0.04
SMARCB1-203ENST00000407082 ANO10Q9NW15 660 aa14.81□□□□□ -0.04
SMARCB1-203ENST00000407082 PI4KBQ9UBF8 816 aa14.81□□□□□ -0.04
SMARCB1-203ENST00000407082 USP17L12C9JPN9 530 aa14.8□□□□□ -0.04
SMARCB1-203ENST00000407082 USP17L21D6R901 530 aa14.8□□□□□ -0.04
SMARCB1-203ENST00000407082 SPTLC2O15270 562 aa14.8□□□□□ -0.04
SMARCB1-203ENST00000407082 NR1I2O75469 434 aa14.8□□□□□ -0.04
SMARCB1-203ENST00000407082 HLA-DOAP06340 250 aa14.8□□□□□ -0.04
SMARCB1-203ENST00000407082 TPM2P07951 284 aa14.8□□□□□ -0.04
SMARCB1-203ENST00000407082 CALM1P0DP23 149 aa14.8□□□□□ -0.04
SMARCB1-203ENST00000407082 CALM2P0DP24 149 aa14.8□□□□□ -0.04
SMARCB1-203ENST00000407082 CALM3P0DP25 149 aa14.8□□□□□ -0.04
SMARCB1-203ENST00000407082 XBP1P17861 261 aa14.8□□□□□ -0.04
SMARCB1-203ENST00000407082 DHX8Q14562 1220 aaKnown RBP14.8□□□□□ -0.04
SMARCB1-203ENST00000407082 CAMK4Q16566 473 aa14.8□□□□□ -0.04
SMARCB1-203ENST00000407082 NOL9Q5SY16 702 aaKnown RBP14.8□□□□□ -0.04
SMARCB1-203ENST00000407082 MYSM1Q5VVJ2 828 aa14.8□□□□□ -0.04
SMARCB1-203ENST00000407082 CTR9Q6PD62 1173 aa14.8□□□□□ -0.04
SMARCB1-203ENST00000407082 CYB5R4Q7L1T6 521 aa14.8□□□□□ -0.04
SMARCB1-203ENST00000407082 AMOTL1Q8IY63 956 aa14.8□□□□□ -0.04
SMARCB1-203ENST00000407082 FSIP1Q8NA03 581 aa14.8□□□□□ -0.04
SMARCB1-203ENST00000407082 C11orf49Q9H6J7 331 aa14.8□□□□□ -0.04
SMARCB1-203ENST00000407082 LY9Q9HBG7 655 aa14.8□□□□□ -0.04
SMARCB1-203ENST00000407082 EPB41L4AQ9HCS5 686 aaPredicted RBP14.8□□□□□ -0.04
SMARCB1-203ENST00000407082 MRVI1Q9Y6F6 885 aa14.8□□□□□ -0.04
SMARCB1-203ENST00000407082 ATRNL1Q5VV63 1379 aa14.8□□□□□ -0.04
SMARCB1-203ENST00000407082 FOCADQ5VW36 1801 aa14.8□□□□□ -0.04
SMARCB1-203ENST00000407082 COL2A1P02458 1487 aaPredicted RBP14.79□□□□□ -0.04
SMARCB1-203ENST00000407082 IFNAR1P17181 557 aa14.79□□□□□ -0.04
SMARCB1-203ENST00000407082 PLCD1P51178 756 aa14.79□□□□□ -0.04
SMARCB1-203ENST00000407082 TPM4P67936 248 aa14.79□□□□□ -0.04
SMARCB1-203ENST00000407082 LAMA3Q16787 3333 aa14.79□□□□□ -0.04
SMARCB1-203ENST00000407082 ANKLE1Q8NAG6 615 aa14.79□□□□□ -0.04
SMARCB1-203ENST00000407082 LINC00301Q8NCQ3 95 aa14.79□□□□□ -0.04
SMARCB1-203ENST00000407082 UBAC1Q9BSL1 405 aa14.79□□□□□ -0.04
SMARCB1-203ENST00000407082 ZSWIM5Q9P217 1185 aa14.79□□□□□ -0.04
SMARCB1-203ENST00000407082 MYH1P12882 1939 aa14.78□□□□□ -0.04
SMARCB1-203ENST00000407082 ALPK3Q96L96 1907 aa14.78□□□□□ -0.04
SMARCB1-203ENST00000407082 A0A0G2JLL6 359 aaPredicted RBP14.78□□□□□ -0.04
SMARCB1-203ENST00000407082 TRIM75PA6NK02 468 aa14.78□□□□□ -0.04
SMARCB1-203ENST00000407082 MINDY4BA8MYZ0 360 aa14.78□□□□□ -0.04
SMARCB1-203ENST00000407082 PPP6R2O75170 966 aa14.78□□□□□ -0.04
SMARCB1-203ENST00000407082 CYP2D6P10635 497 aa14.78□□□□□ -0.04
SMARCB1-203ENST00000407082 PTPRAP18433 802 aa14.78□□□□□ -0.04
SMARCB1-203ENST00000407082 ZNF165P49910 485 aa14.78□□□□□ -0.04
SMARCB1-203ENST00000407082 FOSBP53539 338 aa14.78□□□□□ -0.04
SMARCB1-203ENST00000407082 PLCB2Q00722 1185 aa14.78□□□□□ -0.04
SMARCB1-203ENST00000407082 AKAP17AQ02040 695 aaKnown RBP14.78□□□□□ -0.04
SMARCB1-203ENST00000407082 GUCY1B3Q02153 619 aa14.78□□□□□ -0.04
SMARCB1-203ENST00000407082 CEBPZQ03701 1054 aaKnown RBP14.78□□□□□ -0.04
SMARCB1-203ENST00000407082 PPARAQ07869 468 aa14.78□□□□□ -0.04
SMARCB1-203ENST00000407082 ANO6Q4KMQ2 910 aa14.78□□□□□ -0.04
SMARCB1-203ENST00000407082 SBK1Q52WX2 424 aa14.78□□□□□ -0.04
SMARCB1-203ENST00000407082 ANO1Q5XXA6 986 aa14.78□□□□□ -0.04
SMARCB1-203ENST00000407082 PRRT2Q7Z6L0 340 aaPredicted RBP14.78□□□□□ -0.04
SMARCB1-203ENST00000407082 FOXP4Q8IVH2 680 aaPredicted RBP14.78□□□□□ -0.04
SMARCB1-203ENST00000407082 SCYL3Q8IZE3 742 aa14.78□□□□□ -0.04
SMARCB1-203ENST00000407082 CRACR2BQ8N4Y2 399 aaPredicted RBP14.78□□□□□ -0.04
SMARCB1-203ENST00000407082 TIGD1Q96MW7 591 aa14.78□□□□□ -0.04
SMARCB1-203ENST00000407082 SDF4Q9BRK5 362 aa14.78□□□□□ -0.04
SMARCB1-203ENST00000407082 TRIM34Q9BYJ4 488 aa14.78□□□□□ -0.04
SMARCB1-203ENST00000407082 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.78□□□□□ -0.042e-8■■□□□ 13.5
SMARCB1-203ENST00000407082 HMX1Q9NP08 348 aaPredicted RBP14.78□□□□□ -0.04
SMARCB1-203ENST00000407082 TOMM22Q9NS69 142 aa14.78□□□□□ -0.04
SMARCB1-203ENST00000407082 ARPP21Q9UBL0 812 aaPredicted RBP14.78□□□□□ -0.04
SMARCB1-203ENST00000407082 HOOK1Q9UJC3 728 aaKnown RBP14.78□□□□□ -0.04
SMARCB1-203ENST00000407082 RPTORQ8N122 1335 aa14.77□□□□□ -0.04
SMARCB1-203ENST00000407082 BAZ2AQ9UIF9 1905 aaKnown RBP14.77□□□□□ -0.04
SMARCB1-203ENST00000407082 CYP2D7A0A087X1C5 515 aa14.77□□□□□ -0.05
SMARCB1-203ENST00000407082 TBC1D12O60347 775 aa14.77□□□□□ -0.05
SMARCB1-203ENST00000407082 DEXIO95424 95 aa14.77□□□□□ -0.05
SMARCB1-203ENST00000407082 HMGCRP04035 888 aa14.77□□□□□ -0.05
SMARCB1-203ENST00000407082 SLURP2P0DP57 97 aa14.77□□□□□ -0.05
SMARCB1-203ENST00000407082 CMA1P23946 247 aa14.77□□□□□ -0.05
SMARCB1-203ENST00000407082 MDM2Q00987 491 aaPredicted RBP14.77□□□□□ -0.05
SMARCB1-203ENST00000407082 TRIM32Q13049 653 aa14.77□□□□□ -0.05
SMARCB1-203ENST00000407082 RTN1Q16799 776 aa14.77□□□□□ -0.05
SMARCB1-203ENST00000407082 CCDC178Q5BJE1 867 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms