RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 ARMC9Q7Z3E5 817 aa8.17□□□□□ -1.1
HDAC9-202ENST00000405010 PEX26Q7Z412 305 aa8.17□□□□□ -1.1
HDAC9-202ENST00000405010 SPATA4Q8NEY3 305 aa8.17□□□□□ -1.1
HDAC9-202ENST00000405010 DPH5Q9H2P9 285 aa8.17□□□□□ -1.1
HDAC9-202ENST00000405010 TMOD3Q9NYL9 352 aa8.17□□□□□ -1.1
HDAC9-202ENST00000405010 A0A0G2JLW4 131 aa8.17□□□□□ -1.1
HDAC9-202ENST00000405010 KRIT1O00522 736 aa8.17□□□□□ -1.1
HDAC9-202ENST00000405010 HIP1RO75146 1068 aa8.17□□□□□ -1.1
HDAC9-202ENST00000405010 PPARAQ07869 468 aa8.17□□□□□ -1.1
HDAC9-202ENST00000405010 KRT79Q5XKE5 535 aa8.17□□□□□ -1.1
HDAC9-202ENST00000405010 VSIG1Q86XK7 387 aa8.17□□□□□ -1.1
HDAC9-202ENST00000405010 ZSWIM5Q9P217 1185 aa8.17□□□□□ -1.1
HDAC9-202ENST00000405010 RNF14Q9UBS8 474 aa8.17□□□□□ -1.1
HDAC9-202ENST00000405010 NOVA2Q9UNW9 492 aaKnown RBP8.17□□□□□ -1.1
HDAC9-202ENST00000405010 ITGA6P23229 1130 aa8.17□□□□□ -1.1
HDAC9-202ENST00000405010 LIFRP42702 1097 aa8.17□□□□□ -1.1
HDAC9-202ENST00000405010 IFNAR2P48551 515 aa8.17□□□□□ -1.1
HDAC9-202ENST00000405010 IKQ13123 557 aaPredicted RBP8.17□□□□□ -1.1
HDAC9-202ENST00000405010 DENND2CQ68D51 928 aa8.17□□□□□ -1.1
HDAC9-202ENST00000405010 PARP9Q8IXQ6 854 aa8.17□□□□□ -1.1
HDAC9-202ENST00000405010 CCT8L2Q96SF2 557 aa8.17□□□□□ -1.1
HDAC9-202ENST00000405010 CD248Q9HCU0 757 aa8.17□□□□□ -1.1
HDAC9-202ENST00000405010 PLAAQ9Y263 795 aa8.17□□□□□ -1.1
HDAC9-202ENST00000405010 PCDHA13Q9Y5I0 950 aa8.17□□□□□ -1.1
HDAC9-202ENST00000405010 TNKSO95271 1327 aa8.17□□□□□ -1.1
HDAC9-202ENST00000405010 MAP2P11137 1827 aaKnown RBP8.16□□□□□ -1.1
HDAC9-202ENST00000405010 FTCDO95954 541 aa8.16□□□□□ -1.1
HDAC9-202ENST00000405010 LSP1P33241 339 aa8.16□□□□□ -1.1
HDAC9-202ENST00000405010 PRPHP41219 470 aa8.16□□□□□ -1.1
HDAC9-202ENST00000405010 KIF11P52732 1056 aa8.16□□□□□ -1.1
HDAC9-202ENST00000405010 VWA3BQ502W6 1294 aa8.16□□□□□ -1.1
HDAC9-202ENST00000405010 NFRKBQ6P4R8 1299 aa8.16□□□□□ -1.1
HDAC9-202ENST00000405010 USP49Q70CQ1 688 aa8.16□□□□□ -1.1
HDAC9-202ENST00000405010 DYMQ7RTS9 669 aa8.16□□□□□ -1.1
HDAC9-202ENST00000405010 RNF26Q9BY78 433 aaPredicted RBP8.16□□□□□ -1.1
HDAC9-202ENST00000405010 NUCKS1Q9H1E3 243 aaKnown RBP8.16□□□□□ -1.1
HDAC9-202ENST00000405010 PLCB1Q9NQ66 1216 aa8.16□□□□□ -1.1
HDAC9-202ENST00000405010 DONSONQ9NYP3 566 aa8.16□□□□□ -1.1
HDAC9-202ENST00000405010 KAT6BQ8WYB5 2073 aa8.16□□□□□ -1.1
HDAC9-202ENST00000405010 GMNCA6NCL1 334 aa8.16□□□□□ -1.1
HDAC9-202ENST00000405010 RPS6KA5O75582 802 aa8.16□□□□□ -1.1
HDAC9-202ENST00000405010 KRT14P02533 472 aa8.16□□□□□ -1.1
HDAC9-202ENST00000405010 GBP1P32455 592 aa8.16□□□□□ -1.1
HDAC9-202ENST00000405010 MYO1EQ12965 1108 aa8.16□□□□□ -1.1
HDAC9-202ENST00000405010 CHRNA2Q15822 529 aa8.16□□□□□ -1.1
HDAC9-202ENST00000405010 TSNAXIP1Q2TAA8 658 aa8.16□□□□□ -1.1
HDAC9-202ENST00000405010 NBPF9Q3BBW0 867 aa8.16□□□□□ -1.1
HDAC9-202ENST00000405010 CABP7Q86V35 215 aa8.16□□□□□ -1.1
HDAC9-202ENST00000405010 MGARPQ8TDB4 240 aa8.16□□□□□ -1.1
HDAC9-202ENST00000405010 ZNF526Q8TF50 670 aaPredicted RBP8.16□□□□□ -1.1
HDAC9-202ENST00000405010 ZNF473Q8WTR7 871 aaKnown RBP8.16□□□□□ -1.1
HDAC9-202ENST00000405010 OSBPL9Q96SU4 736 aa8.16□□□□□ -1.1
HDAC9-202ENST00000405010 EPN3Q9H201 632 aa8.16□□□□□ -1.1
HDAC9-202ENST00000405010 MLXIPQ9HAP2 919 aa8.16□□□□□ -1.1
HDAC9-202ENST00000405010 FAM53CQ9NYF3 392 aa8.16□□□□□ -1.1
HDAC9-202ENST00000405010 NKIRAS1Q9NYS0 192 aa8.16□□□□□ -1.1
HDAC9-202ENST00000405010 FBXO2Q9UK22 296 aaPredicted RBP8.16□□□□□ -1.1
HDAC9-202ENST00000405010 HPSEQ9Y251 543 aa8.16□□□□□ -1.1
HDAC9-202ENST00000405010 UBN2Q6ZU65 1347 aa8.16□□□□□ -1.1
HDAC9-202ENST00000405010 PPRC1Q5VV67 1664 aaKnown RBP8.16□□□□□ -1.1
HDAC9-202ENST00000405010 TRIM49BA6NDI0 452 aa8.16□□□□□ -1.1
HDAC9-202ENST00000405010 CALCOCO2Q13137 446 aa8.16□□□□□ -1.1
HDAC9-202ENST00000405010 UBE3CQ15386 1083 aa8.16□□□□□ -1.1
HDAC9-202ENST00000405010 TTLL7Q6ZT98 887 aa8.16□□□□□ -1.1
HDAC9-202ENST00000405010 CYB5R4Q7L1T6 521 aa8.16□□□□□ -1.1
HDAC9-202ENST00000405010 TAOK1Q7L7X3 1001 aa8.16□□□□□ -1.1
HDAC9-202ENST00000405010 ILDR1Q86SU0 546 aaPredicted RBP8.16□□□□□ -1.1
HDAC9-202ENST00000405010 CROCCP2Q86T23 111 aa8.16□□□□□ -1.1
HDAC9-202ENST00000405010 TBC1D1Q86TI0 1168 aaPredicted RBP8.16□□□□□ -1.1
HDAC9-202ENST00000405010 CRACR2BQ8N4Y2 399 aaPredicted RBP8.16□□□□□ -1.1
HDAC9-202ENST00000405010 NAP1L3Q99457 506 aaPredicted RBP8.16□□□□□ -1.1
HDAC9-202ENST00000405010 CCDC77Q9BR77 488 aa8.16□□□□□ -1.1
HDAC9-202ENST00000405010 CRNKL1Q9BZJ0 848 aaKnown RBP8.16□□□□□ -1.1
HDAC9-202ENST00000405010 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.16□□□□□ -1.1
HDAC9-202ENST00000405010 PSMD14O00487 310 aa8.15□□□□□ -1.1
HDAC9-202ENST00000405010 IRS4O14654 1257 aaPredicted RBP8.15□□□□□ -1.1
HDAC9-202ENST00000405010 SEC24CP53992 1094 aa8.15□□□□□ -1.1
HDAC9-202ENST00000405010 CUL4BQ13620 913 aa8.15□□□□□ -1.1
HDAC9-202ENST00000405010 GRIPAP1Q4V328 841 aa8.15□□□□□ -1.1
HDAC9-202ENST00000405010 GLE1Q53GS7 698 aaKnown RBP8.15□□□□□ -1.1
HDAC9-202ENST00000405010 KRT28Q7Z3Y7 464 aa8.15□□□□□ -1.1
HDAC9-202ENST00000405010 DZIP1Q86YF9 867 aaKnown RBP8.15□□□□□ -1.1
HDAC9-202ENST00000405010 TBC1D10CQ8IV04 446 aa8.15□□□□□ -1.1
HDAC9-202ENST00000405010 INTS9Q9NV88 658 aaKnown RBP8.15□□□□□ -1.1
HDAC9-202ENST00000405010 SNX12Q9UMY4 172 aa8.15□□□□□ -1.1
HDAC9-202ENST00000405010 ZCCHC11Q5TAX3 1644 aaKnown RBP8.15□□□□□ -1.1
HDAC9-202ENST00000405010 VWDEQ8N2E2 1590 aa8.15□□□□□ -1.1
HDAC9-202ENST00000405010 ITIH6Q6UXX5 1313 aa8.15□□□□□ -1.1
HDAC9-202ENST00000405010 TMEM110-MUSTN1A8MSY1 372 aa8.15□□□□□ -1.1
HDAC9-202ENST00000405010 TBX2Q13207 712 aaPredicted RBP8.15□□□□□ -1.1
HDAC9-202ENST00000405010 CCDC38Q502W7 563 aa8.15□□□□□ -1.1
HDAC9-202ENST00000405010 FAM133BQ5BKY9 247 aaKnown RBP8.15□□□□□ -1.1
HDAC9-202ENST00000405010 UHMK1Q8TAS1 419 aaKnown RBP8.15□□□□□ -1.1
HDAC9-202ENST00000405010 P2RX5Q93086 422 aa8.15□□□□□ -1.1
HDAC9-202ENST00000405010 KLHL29Q96CT2 875 aa8.15□□□□□ -1.1
HDAC9-202ENST00000405010 DHTKD1Q96HY7 919 aaPredicted RBP8.15□□□□□ -1.1
HDAC9-202ENST00000405010 ATP6V1G3Q96LB4 118 aa8.15□□□□□ -1.1
HDAC9-202ENST00000405010 RAB17Q9H0T7 212 aa8.15□□□□□ -1.1
HDAC9-202ENST00000405010 THAP9Q9H5L6 903 aa8.15□□□□□ -1.1
HDAC9-202ENST00000405010 ZNF287Q9HBT7 754 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms