RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 PAWRQ96IZ0 340 aaKnown RBP21.32■■□□□ 1
PTPRN2-204ENST00000404321 CPVLQ9H3G5 476 aa21.32■■□□□ 1
PTPRN2-204ENST00000404321 RNF146Q9NTX7 359 aa21.32■■□□□ 1
PTPRN2-204ENST00000404321 ZNF236Q9UL36 1845 aa21.31■■□□□ 1
PTPRN2-204ENST00000404321 CYBAP13498 195 aa21.31■■□□□ 1
PTPRN2-204ENST00000404321 NT5C2P49902 561 aa21.31■■□□□ 1
PTPRN2-204ENST00000404321 ANO1Q5XXA6 986 aa21.31■■□□□ 1
PTPRN2-204ENST00000404321 CHST13Q8NET6 341 aa21.31■■□□□ 1
PTPRN2-204ENST00000404321 DPF3Q92784 378 aa21.31■■□□□ 1
PTPRN2-204ENST00000404321 LSG1Q9H089 658 aaKnown RBP21.31■■□□□ 1
PTPRN2-204ENST00000404321 ANO2Q9NQ90 1003 aa21.31■■□□□ 1
PTPRN2-204ENST00000404321 FBXO40Q9UH90 709 aa21.31■■□□□ 1
PTPRN2-204ENST00000404321 OGDHLQ9ULD0 1010 aa21.31■■□□□ 1
PTPRN2-204ENST00000404321 CCPG1Q9ULG6 757 aa21.31■■□□□ 1
PTPRN2-204ENST00000404321 E7EWF7 191 aa21.3■■□□□ 1
PTPRN2-204ENST00000404321 SNHG28P0DPA3 235 aa21.3■■□□□ 1
PTPRN2-204ENST00000404321 BTNL9Q6UXG8 535 aa21.3■■□□□ 1
PTPRN2-204ENST00000404321 CHST3Q7LGC8 479 aa21.3■■□□□ 1
PTPRN2-204ENST00000404321 TRERF1Q96PN7 1200 aa21.3■■□□□ 1
PTPRN2-204ENST00000404321 UBA5Q9GZZ9 404 aa21.3■■□□□ 1
PTPRN2-204ENST00000404321 ACAD9Q9H845 621 aa21.3■■□□□ 1
PTPRN2-204ENST00000404321 DDX20Q9UHI6 824 aaKnown RBP21.3■■□□□ 1
PTPRN2-204ENST00000404321 MUM1L1Q5H9M0 696 aa21.29■■□□□ 1
PTPRN2-204ENST00000404321 IFIT1BQ5T764 474 aaKnown RBP21.29■■□□□ 1
PTPRN2-204ENST00000404321 PRPF38BQ5VTL8 546 aaKnown RBP21.29■■□□□ 1
PTPRN2-204ENST00000404321 RALYLQ86SE5 291 aaKnown RBP21.29■■□□□ 1
PTPRN2-204ENST00000404321 ANKS1AQ92625 1134 aa21.29■■□□□ 1
PTPRN2-204ENST00000404321 RANBP17Q9H2T7 1088 aaKnown RBP21.29■■□□□ 1
PTPRN2-204ENST00000404321 DNAJC25-GNG10A0A024R161 153 aa21.28■■□□□ 1
PTPRN2-204ENST00000404321 MNX1P50219 401 aaPredicted RBP21.28■■□□□ 1
PTPRN2-204ENST00000404321 NCOA7Q8NI08 942 aa21.28■■□□□ 1
PTPRN2-204ENST00000404321 TINF2Q9BSI4 451 aa21.28■■□□□ 1
PTPRN2-204ENST00000404321 DIS3Q9Y2L1 958 aaKnown RBP21.28■■□□□ 1
PTPRN2-204ENST00000404321 ICAM1P05362 532 aa21.27■■□□□ 1
PTPRN2-204ENST00000404321 CENPBP07199 599 aaPredicted RBP21.27■■□□□ 1
PTPRN2-204ENST00000404321 SEC23AQ15436 765 aa21.27■■□□□ 1
PTPRN2-204ENST00000404321 NECAB2Q7Z6G3 386 aa21.27■■□□□ 1
PTPRN2-204ENST00000404321 ANKLE1Q8NAG6 615 aa21.27■■□□□ 1
PTPRN2-204ENST00000404321 HTATIP2Q9BUP3 242 aa21.27■■□□□ 1
PTPRN2-204ENST00000404321 A1CFQ9NQ94 594 aaKnown RBP21.27■■□□□ 1
PTPRN2-204ENST00000404321 IFIT3O14879 490 aaKnown RBP21.26■□□□□ 0.99
PTPRN2-204ENST00000404321 CDC45O75419 566 aa21.26■□□□□ 0.99
PTPRN2-204ENST00000404321 MYCNP04198 464 aaPredicted RBP21.26■□□□□ 0.99
PTPRN2-204ENST00000404321 CNTN2Q02246 1040 aa21.26■□□□□ 0.99
PTPRN2-204ENST00000404321 TKFCQ3LXA3 575 aa21.26■□□□□ 0.99
PTPRN2-204ENST00000404321 GPATCH4Q5T3I0 446 aaKnown RBP21.26■□□□□ 0.99
PTPRN2-204ENST00000404321 SENP2Q9HC62 589 aa21.26■□□□□ 0.99
PTPRN2-204ENST00000404321 POTEB2H3BUK9 544 aa21.25■□□□□ 0.99
PTPRN2-204ENST00000404321 CAPN2P17655 700 aa21.25■□□□□ 0.99
PTPRN2-204ENST00000404321 NSMFQ6X4W1 530 aa21.25■□□□□ 0.99
PTPRN2-204ENST00000404321 FGD4Q96M96 766 aa21.25■□□□□ 0.99
PTPRN2-204ENST00000404321 C11orf49Q9H6J7 331 aa21.25■□□□□ 0.99
PTPRN2-204ENST00000404321 SLC27A2O14975 620 aa21.24■□□□□ 0.99
PTPRN2-204ENST00000404321 SEPT4O43236 478 aa21.24■□□□□ 0.99
PTPRN2-204ENST00000404321 DHX16O60231 1041 aaKnown RBP21.24■□□□□ 0.99
PTPRN2-204ENST00000404321 MSCO60682 206 aa21.24■□□□□ 0.99
PTPRN2-204ENST00000404321 PARP1P09874 1014 aaKnown RBP21.24■□□□□ 0.99
PTPRN2-204ENST00000404321 ANTXR2P58335 489 aa21.24■□□□□ 0.99
PTPRN2-204ENST00000404321 CASC1Q6TDU7 716 aa21.24■□□□□ 0.99
PTPRN2-204ENST00000404321 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.24■□□□□ 0.99
PTPRN2-204ENST00000404321 CNPY2Q9Y2B0 182 aa21.24■□□□□ 0.99
PTPRN2-204ENST00000404321 DDX49Q9Y6V7 483 aaKnown RBP21.24■□□□□ 0.99
PTPRN2-204ENST00000404321 ERICH2A1L162 156 aa21.23■□□□□ 0.99
PTPRN2-204ENST00000404321 H0YGN5 161 aa21.23■□□□□ 0.99
PTPRN2-204ENST00000404321 NFIBO00712 420 aa21.23■□□□□ 0.99
PTPRN2-204ENST00000404321 SNAI1O95863 264 aaPredicted RBP21.23■□□□□ 0.99
PTPRN2-204ENST00000404321 COL9A3Q14050 684 aaPredicted RBP21.23■□□□□ 0.99
PTPRN2-204ENST00000404321 ASPRV1Q53RT3 343 aa21.23■□□□□ 0.99
PTPRN2-204ENST00000404321 CREB3L3Q68CJ9 461 aa21.23■□□□□ 0.99
PTPRN2-204ENST00000404321 MB21D2Q8IYB1 491 aaPredicted RBP21.23■□□□□ 0.99
PTPRN2-204ENST00000404321 LENG1Q96BZ8 264 aaPredicted RBP21.23■□□□□ 0.99
PTPRN2-204ENST00000404321 PURBQ96QR8 312 aaKnown RBP21.23■□□□□ 0.99
PTPRN2-204ENST00000404321 VAT1LQ9HCJ6 419 aa21.23■□□□□ 0.99
PTPRN2-204ENST00000404321 GPHNQ9NQX3 736 aaPredicted RBP21.23■□□□□ 0.99
PTPRN2-204ENST00000404321 CYP39A1Q9NYL5 469 aa21.23■□□□□ 0.99
PTPRN2-204ENST00000404321 ZHX1Q9UKY1 873 aaPredicted RBP21.23■□□□□ 0.99
PTPRN2-204ENST00000404321 ZNF865P0CJ78 1059 aaPredicted RBP21.23■□□□□ 0.99
PTPRN2-204ENST00000404321 WTAPQ15007 396 aa21.23■□□□□ 0.99
PTPRN2-204ENST00000404321 CDC37Q16543 378 aaPredicted RBP21.23■□□□□ 0.99
PTPRN2-204ENST00000404321 USH1GQ495M9 461 aa21.23■□□□□ 0.99
PTPRN2-204ENST00000404321 TMEM67Q5HYA8 995 aa21.23■□□□□ 0.99
PTPRN2-204ENST00000404321 GJC2Q5T442 439 aaPredicted RBP21.23■□□□□ 0.99
PTPRN2-204ENST00000404321 ADGRF4Q8IZF3 695 aa21.23■□□□□ 0.99
PTPRN2-204ENST00000404321 STAG2Q8N3U4 1231 aa21.23■□□□□ 0.99
PTPRN2-204ENST00000404321 FAM133AQ8N9E0 248 aa21.23■□□□□ 0.99
PTPRN2-204ENST00000404321 PFASO15067 1338 aa21.22■□□□□ 0.99
PTPRN2-204ENST00000404321 SOWAHBA6NEL2 793 aa21.22■□□□□ 0.99
PTPRN2-204ENST00000404321 SART3Q15020 963 aaKnown RBP21.22■□□□□ 0.99
PTPRN2-204ENST00000404321 NECTIN1Q15223 517 aa21.22■□□□□ 0.99
PTPRN2-204ENST00000404321 MAMDC4Q6UXC1 1216 aa21.22■□□□□ 0.99
PTPRN2-204ENST00000404321 ARMCX2Q7L311 632 aa21.22■□□□□ 0.99
PTPRN2-204ENST00000404321 ZNF467Q7Z7K2 595 aaPredicted RBP21.22■□□□□ 0.99
PTPRN2-204ENST00000404321 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.22■□□□□ 0.99
PTPRN2-204ENST00000404321 PPP4R2Q9NY27 417 aa21.22■□□□□ 0.99
PTPRN2-204ENST00000404321 NRBP1Q9UHY1 535 aa21.22■□□□□ 0.99
PTPRN2-204ENST00000404321 SYNGAP1Q96PV0 1343 aa21.21■□□□□ 0.99
PTPRN2-204ENST00000404321 EVI5O60447 810 aa21.21■□□□□ 0.99
PTPRN2-204ENST00000404321 BAATQ14032 418 aaPredicted RBP21.21■□□□□ 0.99
PTPRN2-204ENST00000404321 CCDC144CPQ8IYA2 1237 aa21.21■□□□□ 0.99
PTPRN2-204ENST00000404321 MSL3Q8N5Y2 521 aaKnown RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms