RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 TAL1P17542 331 aaPredicted RBP15.66■□□□□ 0.1
SDF4-203ENST00000403997 SLC16A2P36021 539 aa15.66■□□□□ 0.1
SDF4-203ENST00000403997 LRRC26Q2I0M4 334 aa15.66■□□□□ 0.1
SDF4-203ENST00000403997 TKFCQ3LXA3 575 aa15.66■□□□□ 0.1
SDF4-203ENST00000403997 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.66■□□□□ 0.12e-6■■■■□ 19.3
SDF4-203ENST00000403997 MSL3Q8N5Y2 521 aaKnown RBP15.66■□□□□ 0.1
SDF4-203ENST00000403997 RUFY2Q8WXA3 655 aa15.66■□□□□ 0.1
SDF4-203ENST00000403997 TRERF1Q96PN7 1200 aa15.66■□□□□ 0.1
SDF4-203ENST00000403997 ACAD9Q9H845 621 aa15.66■□□□□ 0.1
SDF4-203ENST00000403997 RNF146Q9NTX7 359 aa15.66■□□□□ 0.1
SDF4-203ENST00000403997 RBM27Q9P2N5 1060 aaKnown RBP15.66■□□□□ 0.1
SDF4-203ENST00000403997 ZNF536O15090 1300 aa15.66■□□□□ 0.1
SDF4-203ENST00000403997 B4E1Z4 1266 aa15.65■□□□□ 0.1
SDF4-203ENST00000403997 KBTBD13C9JR72 458 aa15.65■□□□□ 0.1
SDF4-203ENST00000403997 KDM4AO75164 1064 aa15.65■□□□□ 0.1
SDF4-203ENST00000403997 RARBP10826 455 aa15.65■□□□□ 0.1
SDF4-203ENST00000403997 SYN1P17600 705 aa15.65■□□□□ 0.1
SDF4-203ENST00000403997 CCDC178Q5BJE1 867 aa15.65■□□□□ 0.1
SDF4-203ENST00000403997 SYDE2Q5VT97 1194 aa15.65■□□□□ 0.1
SDF4-203ENST00000403997 ZNF467Q7Z7K2 595 aaPredicted RBP15.65■□□□□ 0.1
SDF4-203ENST00000403997 IQCA1Q86XH1 822 aa15.65■□□□□ 0.1
SDF4-203ENST00000403997 IL25Q9H293 177 aa15.65■□□□□ 0.1
SDF4-203ENST00000403997 CCPG1Q9ULG6 757 aa15.65■□□□□ 0.1
SDF4-203ENST00000403997 SMCHD1A6NHR9 2005 aa15.65■□□□□ 0.1
SDF4-203ENST00000403997 POTEB2H3BUK9 544 aa15.64■□□□□ 0.09
SDF4-203ENST00000403997 SNAI1O95863 264 aaPredicted RBP15.64■□□□□ 0.09
SDF4-203ENST00000403997 ZNF865P0CJ78 1059 aaPredicted RBP15.64■□□□□ 0.09
SDF4-203ENST00000403997 PDHBP11177 359 aa15.64■□□□□ 0.09
SDF4-203ENST00000403997 AKR1A1P14550 325 aa15.64■□□□□ 0.09
SDF4-203ENST00000403997 CHMLP26374 656 aa15.64■□□□□ 0.09
SDF4-203ENST00000403997 NT5C2P49902 561 aa15.64■□□□□ 0.09
SDF4-203ENST00000403997 ATN1P54259 1190 aaPredicted RBP15.64■□□□□ 0.09
SDF4-203ENST00000403997 LRRC41Q15345 812 aa15.64■□□□□ 0.09
SDF4-203ENST00000403997 MAMDC4Q6UXC1 1216 aa15.64■□□□□ 0.09
SDF4-203ENST00000403997 BTNL9Q6UXG8 535 aa15.64■□□□□ 0.09
SDF4-203ENST00000403997 DGKHQ86XP1 1220 aa15.64■□□□□ 0.09
SDF4-203ENST00000403997 A1CFQ9NQ94 594 aaKnown RBP15.64■□□□□ 0.09
SDF4-203ENST00000403997 XPNPEP3Q9NQH7 507 aa15.64■□□□□ 0.09
SDF4-203ENST00000403997 ZSWIM5Q9P217 1185 aa15.64■□□□□ 0.09
SDF4-203ENST00000403997 SYNGAP1Q96PV0 1343 aa15.64■□□□□ 0.09
SDF4-203ENST00000403997 CNTN2Q02246 1040 aa15.63■□□□□ 0.09
SDF4-203ENST00000403997 MUM1L1Q5H9M0 696 aa15.63■□□□□ 0.09
SDF4-203ENST00000403997 SLC17A8Q8NDX2 589 aa15.63■□□□□ 0.09
SDF4-203ENST00000403997 KRT23Q9C075 422 aa15.63■□□□□ 0.09
SDF4-203ENST00000403997 RANBP17Q9H2T7 1088 aaKnown RBP15.63■□□□□ 0.09
SDF4-203ENST00000403997 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.63■□□□□ 0.09
SDF4-203ENST00000403997 ZHX1Q9UKY1 873 aaPredicted RBP15.63■□□□□ 0.09
SDF4-203ENST00000403997 FAM184BQ9ULE4 1060 aa15.63■□□□□ 0.09
SDF4-203ENST00000403997 TRIOBPQ9H2D6 2365 aa15.63■□□□□ 0.09
SDF4-203ENST00000403997 RAD50Q92878 1312 aa15.63■□□□□ 0.09
SDF4-203ENST00000403997 PLXNA1Q9UIW2 1896 aa15.63■□□□□ 0.09
SDF4-203ENST00000403997 ALPK3Q96L96 1907 aa15.62■□□□□ 0.09
SDF4-203ENST00000403997 PGK1P00558 417 aa15.62■□□□□ 0.09
SDF4-203ENST00000403997 ICAM1P05362 532 aa15.62■□□□□ 0.09
SDF4-203ENST00000403997 ADCYAP1R1P41586 468 aa15.62■□□□□ 0.09
SDF4-203ENST00000403997 FXR1P51114 621 aaKnown RBP eCLIP15.62■□□□□ 0.09
SDF4-203ENST00000403997 ZNF543Q08ER8 600 aa15.62■□□□□ 0.09
SDF4-203ENST00000403997 ACVR2BQ13705 512 aa15.62■□□□□ 0.09
SDF4-203ENST00000403997 RNF180Q86T96 592 aa15.62■□□□□ 0.09
SDF4-203ENST00000403997 FGD4Q96M96 766 aa15.62■□□□□ 0.09
SDF4-203ENST00000403997 ZSCAN10Q96SZ4 725 aaPredicted RBP15.62■□□□□ 0.09
SDF4-203ENST00000403997 PRO3102Q9H379 93 aa15.62■□□□□ 0.09
SDF4-203ENST00000403997 KAT14Q9H8E8 782 aa15.62■□□□□ 0.09
SDF4-203ENST00000403997 CNNM2Q9H8M5 875 aa15.62■□□□□ 0.09
SDF4-203ENST00000403997 GOLGA8HP0CJ92 632 aa15.61■□□□□ 0.09
SDF4-203ENST00000403997 PTH1RQ03431 593 aa15.61■□□□□ 0.09
SDF4-203ENST00000403997 GPATCH4Q5T3I0 446 aaKnown RBP15.61■□□□□ 0.09
SDF4-203ENST00000403997 NSMFQ6X4W1 530 aa15.61■□□□□ 0.09
SDF4-203ENST00000403997 SLC39A5Q6ZMH5 540 aa15.61■□□□□ 0.09
SDF4-203ENST00000403997 ARMCX2Q7L311 632 aa15.61■□□□□ 0.09
SDF4-203ENST00000403997 CCDC144CPQ8IYA2 1237 aa15.61■□□□□ 0.09
SDF4-203ENST00000403997 FAM133AQ8N9E0 248 aa15.61■□□□□ 0.09
SDF4-203ENST00000403997 PNMA1Q8ND90 353 aa15.61■□□□□ 0.09
SDF4-203ENST00000403997 ANKS1AQ92625 1134 aa15.61■□□□□ 0.09
SDF4-203ENST00000403997 FERMT2Q96AC1 680 aa15.61■□□□□ 0.09
SDF4-203ENST00000403997 LENG1Q96BZ8 264 aaPredicted RBP15.61■□□□□ 0.09
SDF4-203ENST00000403997 UBAC1Q9BSL1 405 aa15.61■□□□□ 0.09
SDF4-203ENST00000403997 ABHD16BQ9H3Z7 469 aa15.61■□□□□ 0.09
SDF4-203ENST00000403997 CYP39A1Q9NYL5 469 aa15.61■□□□□ 0.09
SDF4-203ENST00000403997 FRMPD3Q5JV73 1810 aa15.61■□□□□ 0.09
SDF4-203ENST00000403997 SOWAHBA6NEL2 793 aa15.6■□□□□ 0.09
SDF4-203ENST00000403997 SNHG28P0DPA3 235 aa15.6■□□□□ 0.09
SDF4-203ENST00000403997 RTP1P59025 263 aa15.6■□□□□ 0.09
SDF4-203ENST00000403997 TRDNQ13061 729 aa15.6■□□□□ 0.09
SDF4-203ENST00000403997 ENAHQ8N8S7 591 aaPredicted RBP15.6■□□□□ 0.09
SDF4-203ENST00000403997 GDF15Q99988 308 aa15.6■□□□□ 0.09
SDF4-203ENST00000403997 UBA5Q9GZZ9 404 aa15.6■□□□□ 0.09
SDF4-203ENST00000403997 ATP11BQ9Y2G3 1177 aa15.6■□□□□ 0.09
SDF4-203ENST00000403997 U3KPZ7 1027 aaPredicted RBP15.6■□□□□ 0.09
SDF4-203ENST00000403997 ASB14A6NK59 587 aa15.59■□□□□ 0.09
SDF4-203ENST00000403997 SGSM2O43147 1006 aa15.59■□□□□ 0.09
SDF4-203ENST00000403997 MAGEA10P43363 369 aaPredicted RBP15.59■□□□□ 0.09
SDF4-203ENST00000403997 CCDC144BQ3MJ40 725 aa15.59■□□□□ 0.09
SDF4-203ENST00000403997 PNMA2Q9UL42 364 aa15.59■□□□□ 0.09
SDF4-203ENST00000403997 PHF24Q9UPV7 400 aa15.59■□□□□ 0.09
SDF4-203ENST00000403997 TNKSO95271 1327 aa15.59■□□□□ 0.09
SDF4-203ENST00000403997 DUSP11O75319 330 aaKnown RBP15.58■□□□□ 0.08
SDF4-203ENST00000403997 BMP8BP34820 402 aa15.58■□□□□ 0.08
SDF4-203ENST00000403997 BAATQ14032 418 aaPredicted RBP15.58■□□□□ 0.08
SDF4-203ENST00000403997 IFIT1BQ5T764 474 aaKnown RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms